LOCUS       NM_001106500            1486 bp    mRNA    linear   ROD 05-MAY-2024
DEFINITION  Rattus norvegicus NADH:ubiquinone oxidoreductase complex assembly
            factor 1 (Ndufaf1), transcript variant 4, mRNA; nuclear gene for
            mitochondrial product.
ACCESSION   NM_001106500 XM_001080852 XM_215814
VERSION     NM_001106500.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1486)
  AUTHORS   Vogel,R.O., Janssen,R.J., van den Brand,M.A., Dieteren,C.E.,
            Verkaart,S., Koopman,W.J., Willems,P.H., Pluk,W., van den
            Heuvel,L.P., Smeitink,J.A. and Nijtmans,L.G.
  TITLE     Cytosolic signaling protein Ecsit also localizes to mitochondria
            where it interacts with chaperone NDUFAF1 and functions in complex
            I assembly
  JOURNAL   Genes Dev 21 (5), 615-624 (2007)
   PUBMED   17344420
REFERENCE   2  (bases 1 to 1486)
  AUTHORS   Vogel,R.O., Janssen,R.J., Ugalde,C., Grovenstein,M., Huijbens,R.J.,
            Visch,H.J., van den Heuvel,L.P., Willems,P.H., Zeviani,M.,
            Smeitink,J.A. and Nijtmans,L.G.
  TITLE     Human mitochondrial complex I assembly is mediated by NDUFAF1
  JOURNAL   FEBS J 272 (20), 5317-5326 (2005)
   PUBMED   16218961
REFERENCE   3  (bases 1 to 1486)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473949.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_215814.4, XM_001080852.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA5760383, SAMEA5760396
                              [ECO:0000350]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1486
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q35"
     gene            1..1486
                     /gene="Ndufaf1"
                     /gene_synonym="Cia30"
                     /note="NADH:ubiquinone oxidoreductase complex assembly
                     factor 1"
                     /db_xref="GeneID:296086"
                     /db_xref="RGD:1306202"
     exon            1..213
                     /gene="Ndufaf1"
                     /gene_synonym="Cia30"
                     /inference="alignment:Splign:2.1.0"
     exon            214..856
                     /gene="Ndufaf1"
                     /gene_synonym="Cia30"
                     /inference="alignment:Splign:2.1.0"
     CDS             281..1267
                     /gene="Ndufaf1"
                     /gene_synonym="Cia30"
                     /note="NADH dehydrogenase (ubiquinone) 1 alpha subcomplex,
                     assembly factor 1; NADH dehydrogenase (ubiquinone) complex
                     I, assembly factor 1"
                     /codon_start=1
                     /product="complex I intermediate-associated protein 30,
                     mitochondrial"
                     /protein_id="NP_001099970.1"
                     /db_xref="GeneID:296086"
                     /db_xref="RGD:1306202"
                     /translation="MASIHKLLIGTYIHRNFLRPRAAVPPFVGNHFVDYSSSSLQKQV
                     ASANKVSQQGKTEEGLQGHDHKEVALDVPSPDRTPEVSFDKAIRDEAMEHFRRLKDEI
                     VAHVRGPDGRPLHEVIMEQARVVWQFREKEDLDKWILTSDKTIGGRSEIFLKMSKNNR
                     SALLYGTLSSEAPQDGESNQSGYCAMISRIPRGAFERKLSYDWSQFNTLYLRVRGDGR
                     PWMVNIKQDTEFIQRKNQMYSYFMFTRGGPYWQEVKIPFSKFFFSNQGRIRDVQGPLI
                     LDKISSIGFTLSDKVDGPFFLEIDFIGVFTDPAHTEEFAYENSPDLNPRLFK"
     exon            857..1042
                     /gene="Ndufaf1"
                     /gene_synonym="Cia30"
                     /inference="alignment:Splign:2.1.0"
     exon            1043..1117
                     /gene="Ndufaf1"
                     /gene_synonym="Cia30"
                     /inference="alignment:Splign:2.1.0"
     exon            1118..1486
                     /gene="Ndufaf1"
                     /gene_synonym="Cia30"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaaaacaga aggactggcc ggaagccata tgtggggggt ctgagaaggt aagctgaccc
       61 ttctcctaga tgggaaactc agggacaagg aggcggggaa gagtcctggc aggtgagggt
      121 tgaggggccg tcactcctcg ggagcgccta gcttccggag gctggggacg tggttaactc
      181 cgccagccga gaggtgaacg cctggtcttc agagtgtaat cgtgctgatt actgaagctt
      241 gttttctcag cccaggcaca ttttttactt ttttcttaca atggcttcta ttcacaaatt
      301 actgataggt acttatattc atagaaactt cctgaggcca agggctgcag tacctccgtt
      361 tgtgggtaat cacttcgtag actattcttc cagtagtctt cagaaacaag tggcttctgc
      421 taacaaagtc tcccagcagg gaaagactga agaaggctta caaggacatg accacaaaga
      481 agttgctttg gatgtacctt ctcctgacag gacacctgaa gttagttttg ataaagcaat
      541 tagagatgaa gcaatggaac attttagacg tttgaaggat gaaattgtgg ctcatgtgag
      601 aggtccagat ggccgcccac tacatgaggt cataatggaa caagccaggg ttgtctggca
      661 gtttcgtgaa aaagaagatt tggataagtg gatactgact tctgataaga caattggagg
      721 tagaagtgaa atattcttga aaatgagcaa gaacaaccga agtgccctcc tttatggaac
      781 tctgagctct gaggcgcctc aggatgggga aagtaaccaa agtggatact gtgcgatgat
      841 ctccaggatt ccaaggggtg cttttgagag gaagctgtct tatgattggt cccagttcaa
      901 tactctgtat ctccgagtcc gtggggatgg ccggccttgg atggtgaata ttaagcaaga
      961 cacggagttt atccagagga aaaatcagat gtacagttac ttcatgttca cccgtggggg
     1021 accctactgg caggaagtca agattccttt ctccaaattt ttcttttcaa atcaaggaag
     1081 gatacgagat gtacagggcc cactgatact ggacaagatc tcttctatag gattcactct
     1141 gtctgataag gtggatggac cattctttct ggaaatagat ttcattggtg tgtttactga
     1201 tccagcccat acagaagaat ttgcttatga gaattctcca gatcttaacc caagactttt
     1261 caaatagaga actggggaca gatttgagta aaactagagt gagtagtggt gataaataaa
     1321 acacgcaaaa cctttctgtc tgccctgccc cactcagtac ttacttaaga caggaagtac
     1381 agcatggcct ctcagtggag tctcctggaa gttcttctga gctcttacgt aaagctaaaa
     1441 taaaaggaag catactgaaa acagaaataa gacctttgtc taccac
//
