LOCUS       XM_017590129            1788 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus natural killer cell cytotoxicity
            receptor 3 ligand 1 (Ncr3lg1), transcript variant X1, mRNA.
ACCESSION   XM_017590129
VERSION     XM_017590129.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017590129.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017590129.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1788
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1788
                     /gene="Ncr3lg1"
                     /note="natural killer cell cytotoxicity receptor 3 ligand
                     1; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 98%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:691092"
                     /db_xref="RGD:1588614"
     CDS             160..1299
                     /gene="Ncr3lg1"
                     /codon_start=1
                     /product="natural cytotoxicity triggering receptor 3
                     ligand 1 isoform X1"
                     /protein_id="XP_017445618.1"
                     /db_xref="GeneID:691092"
                     /db_xref="RGD:1588614"
                     /translation="MASQSCQRGPENAHMHPKGPCCSALCFLCSLGSSPHGSSLGPLR
                     KCGRRSKPVQSSPEGSRVAEWPDGLLSLLLLLWSLLPSAGGLELEMAGTTQIVFLHED
                     VTIPCKILGSLHLDLSIVGVIWSLKKDGDESEVFKFYGDQLEAVRPGANVSLLGLEHG
                     DASLYLPRFELWEAGEYQCKVVVTPEKKEGTTRLEVVAHPNMSLSEKPATARGGKEKL
                     IICQLDGFYPEALDIKWMGSALKDSHFQEITEGVVTGPTVKNDDGTFSVTSSLALKPA
                     LEDHMYQCVVWHRSWLMPQSLNVTVFENTRDSTHGTVPPTAEVGPPVSEPRSVMIYVT
                     IIGLCILLFSVIVCGLWKWKRLTTSNTGLCLRLDVRCCLPSFRNT"
ORIGIN      
        1 aggagagagt cgtcgcggga gaaggagaag ctggagacct ggcaaataaa aggtttcgag
       61 gtccaggtgc atctctgtgt gacccaccgt gctctaagac gacctccaca gctgccctgc
      121 tcaaccagtg gaactgcgta tccagctgct cataacaaga tggcttcaca gagctgccag
      181 aggggcccgg agaatgcaca catgcacccc aagggaccat gttgttctgc tctctgcttt
      241 ctgtgtagcc tgggctcttc accacatggc agcagcctag gaccactcag gaaatgtgga
      301 agacggagca agccagtcca atccagcccg gagggctcac gagtggcaga gtggcccgat
      361 ggcttgctga gtttactgtt gcttctgtgg agcctgctgc cctcagcagg tggactggaa
      421 ttggagatgg caggaaccac tcagatagta ttcctacatg aagatgtcac cataccctgc
      481 aaaatccttg gctccctgca cctcgacctc agtattgtgg gagtcatctg gtctttgaag
      541 aaggacgggg atgaatctga ggtgtttaag ttttatggag atcaactaga ggcagtccgg
      601 cctggagcca acgtgtcctt gttggggcta gaacatggag atgcctcact ctacctaccc
      661 aggttcgagt tatgggaagc aggagaatac caatgcaagg tcgtggtgac ccctgaaaag
      721 aaagagggga caaccaggct agaagtcgtt gctcacccta acatgagttt gtccgagaaa
      781 ccagctacag cgagaggtgg taaagagaaa ctcatcatat gccagctgga tggattctac
      841 ccagaagccc ttgacataaa gtggatgggg agtgccctga aggattccca cttccaagag
      901 attactgagg gtgtagtcac tggtcccact gtgaagaatg atgatggcac cttcagtgta
      961 accagctcct tggccctgaa gccagctctg gaagaccata tgtaccagtg tgtggtgtgg
     1021 cacagatcct ggctcatgcc ccagagtctc aatgtcaccg tttttgagaa cacccgggat
     1081 tccactcatg gaacagtgcc acccacagct gaagtgggtc ctcctgtgtc agagccaaga
     1141 tccgtgatga tatatgtcac catcataggc ctctgtattc tactgttttc agtgatagtt
     1201 tgtggccttt ggaaatggaa aagacttacg acatccaaca caggcctgtg tctcagactt
     1261 gatgtcaggt gctgtttgcc atccttcagg aacacttaac tgaagaaggg caggaagcct
     1321 gtggctgggc ctggattgtc aatgagggtg cagagggtac ctggaagaga aagggggaca
     1381 agagactcga agaaggacac caagacaaga gtctgatcaa ggcgacaatt ttattttttc
     1441 ccaaggctga atttatacca taacaggggt aacagagaga ggggtggggg agtgggaaac
     1501 atttatgcag gtcaaggaca cagtattcgt ggggtcagct gatgtcaaca ggatgttggt
     1561 ttttcagaaa ggttacaagg tacaagatac cttgggcatc ttgatgtcag atgtatttct
     1621 cagcaaggtc agaaccttaa tcatatcctt attcatcctg accaccaggt ttgtattagt
     1681 ctcctgcagc tggctgggga ttttccatga acccagtcct acttaactct aaccataata
     1741 ctagcattaa taaaggaggg ttttaagggc atcgctccca accctggg
//
