LOCUS       NM_001106543            3211 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus nuclear receptor coactivator 5 (Ncoa5), mRNA.
ACCESSION   NM_001106543 XM_001071075 XM_215931
VERSION     NM_001106543.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3211)
  AUTHORS   Gao,S., Li,A., Liu,F., Chen,F., Williams,M., Zhang,C., Kelley,Z.,
            Wu,C.L., Luo,R. and Xiao,H.
  TITLE     NCOA5 haploinsufficiency results in glucose intolerance and
            subsequent hepatocellular carcinoma
  JOURNAL   Cancer Cell 24 (6), 725-737 (2013)
   PUBMED   24332041
REFERENCE   2  (bases 1 to 3211)
  AUTHORS   Bohm,D., Keller,K., Pieter,J., Boehm,N., Wolters,D., Siggelkow,W.,
            Lebrecht,A., Schmidt,M., Kolbl,H., Pfeiffer,N. and Grus,F.H.
  TITLE     Comparison of tear protein levels in breast cancer patients and
            healthy controls using a de novo proteomic approach
  JOURNAL   Oncol Rep 28 (2), 429-438 (2012)
   PUBMED   22664934
REFERENCE   3  (bases 1 to 3211)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474005.2.
            
            [WARNING] On May 7, 2024 this sequence was replaced by
            NM_001106543.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_215931.4, XM_001071075.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760389
                              [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3211
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q42"
     gene            1..3211
                     /gene="Ncoa5"
                     /note="nuclear receptor coactivator 5"
                     /db_xref="GeneID:296372"
                     /db_xref="RGD:1307702"
     exon            1..241
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
     exon            242..308
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
     CDS             271..2007
                     /gene="Ncoa5"
                     /codon_start=1
                     /product="nuclear receptor coactivator 5"
                     /protein_id="NP_001100013.1"
                     /db_xref="GeneID:296372"
                     /db_xref="RGD:1307702"
                     /translation="MNTAPSRPSPTRRDPYSFGDSRDTRRDRSPIRGSPRREPRDGRN
                     GRDTRDRDIRDPRELRDRRDSRDIRDHRDSRSVREARDLRDFRDFRDLRDSRDFRDHR
                     DPVYDRYREIRDSRDPLYRREGSYDRYLRVDDYCRRKDDSYFDRYRDSFDGRGPPGPE
                     SQSRAKERLKREERRREELYRRYFEEIQRRFDAERPVDCSVIVVNKQTKDYAESVGRK
                     VRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQE
                     HRNMPQADAMVLVARNYERYKNDCREKEREEIARQAAKMANDAILQERDRGGPEEGGR
                     GGHPPAIQSLINLLADNRYLTAEETDKIINYLRERKERLLRSSADSLPGPISRQPLGA
                     ASGSSLKTQPSSQPLQSGQVLPSATPTPAAPPTSQQELQAKILSLFNSGAVAANSSSA
                     SPSVATGSSQNQNFSTAANSQPQQRPQASGNQPPNIVGQAGSARNMGPRPGAPSQGLF
                     GQPSSRLAPASNMASQRPVSSTGINFDNPSVQKALDTLIQSGPALSHLVSQTAAQVGR
                     PQAPMGSYQRHY"
     exon            309..632
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
     exon            633..769
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
     exon            770..896
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
     exon            897..1096
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
     exon            1097..1417
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
     exon            1418..3211
                     /gene="Ncoa5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggacgctt caactcgggc ctgccgtaaa tccgcacgct ctttacgaca ctgccgcggc
       61 tgccgctgcg tgcgcgccct ctgcccccac ctccacactc cgccccggcc gccattgcct
      121 cgtgcccgcg ctagtcggtt ggtggcgcct ttgtcctacg gcgggcaggt gggctgaggc
      181 cgaggcggga gcggcgggcc tgaggcggag gagcggcggg gaggcggccg cgctggtagc
      241 gatattaata aggcagcgga aagaagaaat atgaatacgg ctccatcaag acccagcccc
      301 acacgaaggg atccctatag ctttggagat agtcgagata caaggcgtga tcgctctcca
      361 attcgaggaa gtccaaggag agaacccagg gatggcagaa atggccggga tacccgggat
      421 agagacattc gagaccctcg ggagttgcgg gaccgcagag acagcaggga cattcgggat
      481 cacagagaca gcagaagtgt acgtgaagcc cgggacctga gggattttcg ggactttcgt
      541 gatctaagag actctagaga ttttcgagat catcgagacc ccgtgtatga cagatacaga
      601 gaaataagag actccagaga ccctttgtac aggagagaag gctcttatga ccggtatctg
      661 agggtggatg actattgccg gagaaaggat gactcttact ttgaccggta cagagacagc
      721 tttgatggac ggggccctcc tggcccagag agccagtctc gtgcaaaaga gcgtttgaaa
      781 cgtgaggaac gacgtagaga ggagctttat cgtcggtatt ttgaggagat ccagcggcgc
      841 tttgatgctg agaggcctgt ggattgctct gttatcgtgg tcaacaaaca gacgaaagat
      901 tatgcggagt ctgtggggag gaaggtgcga gacctgggca tggttgtgga cctgatcttc
      961 ctcaacacag aggtgtccct ctcacaagca ctggaggatg tcagcagggg agggtctccc
     1021 tttgccattg tcatcaccca gcagcaccag attcaccgtt cctgcacagt caacatcatg
     1081 ttcggaactc cacaagagca tcgaaacatg ccccaggcag acgccatggt gctggtggcc
     1141 aggaactatg agcgctacaa gaacgactgt cgagaaaagg agcgcgagga gatcgcccga
     1201 caggcggcca agatggctaa tgacgccatc ctccaggaaa gagaccgtgg aggcccggag
     1261 gaggggggtc gcggggggca ccctccagct atccagagcc tcatcaacct cctggcagat
     1321 aacagatacc tcactgcaga ggagactgac aagatcatca actacctgcg agagcggaag
     1381 gagcggctcc tgaggagcag cgccgactct ctgcctggcc cgatttcccg ccagccactc
     1441 ggggcggcct cgggttcctc gctgaagaca caaccaagtt cccaaccgct tcagagcggc
     1501 caagtgctcc cttctgctac acccactcca gccgcacccc ccacctccca gcaagagctt
     1561 caggccaaaa tcctcagcct attcaatagt ggcgcggtgg cggccaacag cagctctgca
     1621 tccccctcag tggctaccgg aagttcccag aaccagaatt tttccacagc agcaaacagt
     1681 cagcctcagc aaagaccaca ggcctcagga aatcagcctc caaacattgt gggacaggca
     1741 gggtctgctc ggaacatggg ccctaggcct ggggctcctt cccaagggct ctttggtcag
     1801 ccttccagtc gcctggcacc tgccagcaac atggctagcc agaggcctgt atcttccaca
     1861 ggtattaact ttgacaatcc aagtgtacag aaggctctgg acaccctgat tcagagtggc
     1921 cctgcccttt cccacctggt tagccaaact gcagcacagg tggggcggcc gcaggccccc
     1981 atgggatctt accagaggca ttactgaggc tacgctggtc caatgtccct agtcccccct
     2041 tctctggccc ctcccacttc atcgtaagta gcgttgtttg gaagtgttca tcacactttc
     2101 caggtcagca tcagatatcc taagtttctc tcaccactcc ttccggcggc tgttgcttat
     2161 cacttaacag aatcagaact tagactgcat ccggggctgg atcttttgtt tgggtagaag
     2221 ataagtaggc tcggcttctg tctgggattg cgctggcacc tacctggcaa atttggagga
     2281 aagaaggaag aagccaggcc cagctgcccc agttgagagc accatttctg gagccagtgg
     2341 tcaccacctt agttccacct ccacatcagc cagagctggg ctcctgcctg gctcacagta
     2401 aagccaggtg gccttggcag gcagtgtcat cattgtccca tcagagaatg agactccaag
     2461 gactcaagag tgatttctct ggactgtcaa agagccacaa ggcagccaga gaagagagga
     2521 ctcttgtgcc tgcggcagag tggtcccttg aagttggttt ggtttcatag ttttccattt
     2581 tcttggaagg cctctagaca actgaacagc tctctcagca ctttgacatg aactgtgact
     2641 ctgggcccca ctgctctcta cagcgttagc catgccgttc tctccagccg cacctcatgc
     2701 aggcagcact ggggcagctt caggcgctga agccggacac ctgtgctgtc agtgattcat
     2761 tctgagcccc aggctttcat tttcatctag actcgtgtac tgtttctgat gagcaggaga
     2821 cagggaccat ttgatgttag agtggcagtt ggatatgtcc tcatacagaa gagcattcgt
     2881 aacttttgag acagggtgat acttcgggaa gggttctggc cgctgccctg agtggagcca
     2941 aaggaagagg cactttctcc tttggggaag actgcgcatt agaaccctgg ggatcgagtc
     3001 tgggggagaa caaggcctga ccaggcagca agagcgctaa ctccagtgcg tccctgccag
     3061 gggccgagca caccagtcca gaagcccagc cccgggcggc agtttacgtt ctgatctgtt
     3121 tgtgttccac ggtgggtttc ctccctcttt gaaactcttg tgttgttgat aaaatgaaat
     3181 aattactttt taattaaaat gaaaaaccag a
//
