LOCUS       XM_039078080            6648 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus non-SMC condensin II complex, subunit
            G2 (Ncapg2), transcript variant X1, mRNA.
ACCESSION   XM_039078080
VERSION     XM_039078080.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039078080.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6648
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6648
                     /gene="Ncapg2"
                     /note="non-SMC condensin II complex, subunit G2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 93 ESTs, 2 long SRA reads, 1 Protein, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 31 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362798"
                     /db_xref="RGD:1308406"
     CDS             185..3676
                     /gene="Ncapg2"
                     /codon_start=1
                     /product="condensin-2 complex subunit G2 isoform X1"
                     /protein_id="XP_038934008.1"
                     /db_xref="GeneID:362798"
                     /db_xref="RGD:1308406"
                     /translation="MEKREAFIQAVSKELVEEFLQFLQLDKDPSDPFSLSELLDELSR
                     KQKEELWQRLKDLLTEALLESPVDGWLTAEVQGADDMEPEHSPKMKKSVEITYAIVTV
                     ILASVPIINEHENYGALLECAVILNGILYALPESEQKLQNSIQDLCVKWWERGLPAKE
                     DMGKTAFVMLLRKSLETKTGADMCRLWRIHQALYCFDYDLEESREIKDMLLQCFINVN
                     CIKKEEGRRFLSYLFSWNIDFIKMIHDTIKNQLPGLQKSLMVHIAEIYFRAWKKASGK
                     ILETIENDCIQDFMFHGIHLPRRSPVHSKVREVLSYFHQQKVRQGVEEMLYRLYKPIL
                     WRGLKARNSEVRSNAALLFVEAFPVRDPNFIATEMDSEIQKQFEELYSLLEDPYPWVR
                     STGILGVCKITSKYWEMMPPTILVDLLKKVTGELAFDISSADVRCSVFKCLPIILDNK
                     LSHPLLEQLLPSLRYSLHDNAEKVRVAFVDLLLKVKAVRAAKFWKICPMEDILVRLEM
                     DSRPVSRRLVSLIFNSFLPVNQPEEVWCERCVTLIQMNRAAARRFYQYAHEHTASTNI
                     GLHLCLSRVSLPLPQSAWSRCSVFSLTKLIHVIRHCLNACIQRTLREGAETHKECEKE
                     NASVLDKTLSVNDTASMAGLLEIIVILWKNIHRSLENNKEAKAYTINKFASVLPEYLK
                     VFKDERCKIPLFMLMSFLPASAVPVFSCGVISALRNQEESVTGRSYCTLLDCLCSWGQ
                     VGHVLELIVDWLPTVPPQAKSNLASKRKVQINDMCSVKPKLALLYMEYLLTHPKNREC
                     LLSAPQKKLNQLLKALEGSKADLESLLQSPSGNPLNKATALHAFGLYCRMSVHLQYKF
                     CSEEKIHLSILSDTGSWLENKVLPLLEDQEEEYLKLQRDVYQQIIQTYLAVCKDAVMV
                     GLGDPKFQVQLLQRSFGIMKTVKEFFYVSLLLGILKEIAGNSMIYRTDSDEKVTVLFD
                     LVQEVFQKMLECVACVFRKQPEESLQLFHSVQTPLHEFITTIQSWHQDTAVHHAVLST
                     LIAAPVVEISHQLQKVSDIEELTSPQCLADLPPFSRSLMGVIMKSSDVVRSFLDELKT
                     CVTSGDIEGIVCLTAVLHIILVFNRGKHVSAKVQEVAASVNRKLKTFMEITLEEDSLE
                     RFLYESSMRTLGEFLNS"
ORIGIN      
        1 cgtcagatct cgtgagagcg gcgactggtg acgggctgga gggcgggtgg gtccgggatg
       61 tgcgcgggtg tgtttgaatc tagtccgagc gcgggaaacc atgggtcggt ggtgaggtga
      121 gcgctgcgcg attgtgtcct aacagggttg taaggcaagc tcccttagaa cagtcacatc
      181 caccatggaa aaacgggagg cgttcatcca agcagtatct aaggagctgg tggaagagtt
      241 tctgcagttt cttcaacttg ataaagatcc ttctgatcct ttcagcttaa gtgagttact
      301 agatgaattg tcaaggaagc agaaagaaga attatggcaa aggctgaaag acttgctaac
      361 agaagcattg ctggaaagcc ctgtggatgg gtggctgaca gcggaagtcc aaggcgcaga
      421 cgatatggaa ccagagcaca gtccaaagat gaaaaagagc gtagaaataa catatgcaat
      481 tgttactgta attcttgctt ctgtacctat aataaatgaa catgagaact atggcgccct
      541 cctggagtgt gctgtgatat tgaatggtat tttatatgca ttacctgaat ctgaacaaaa
      601 actccagaac tctattcagg atctgtgtgt caaatggtgg gaaaggggcc ttcctgccaa
      661 ggaggacatg ggaaagactg cgtttgtcat gctgctgagg aagagtctgg agaccaaaac
      721 aggtgcagat atgtgtaggc tgtggcgcat ccaccaggct ctgtactgct ttgactatga
      781 tttggaggag agtagagaaa ttaaagatat gctgctccag tgcttcataa atgttaattg
      841 catcaagaag gaggagggaa gaagatttct tagttatctc tttagttgga atatagactt
      901 tattaaaatg atccatgaca ccattaaaaa tcagttacct ggattacaaa agtctttgat
      961 ggtacacatt gcagaaattt atttcagagc ttggaaaaag gcttcgggaa aaatactgga
     1021 gaccattgaa aatgactgca tccaggactt catgttccac ggcatccacc ttccacggag
     1081 gtctccagtg cactccaaag ttcgagaggt gttgagttac tttcaccagc agaaagtccg
     1141 tcagggagtg gaagagatgc tgtataggtt atataagccc atcctgtgga gaggactaaa
     1201 ggccagaaat tctgaagttc gatcaaatgc tgcattgttg tttgttgaag catttcctgt
     1261 tagagatcca aacttcattg ccactgagat ggacagtgaa attcagaagc agtttgaaga
     1321 actctatagc cttttagaag atccttatcc atgggtccgt tccactggca ttcttggtgt
     1381 ttgtaaaata acttctaaat attgggaaat gatgcccccc accattcttg ttgacctctt
     1441 gaagaaagtc acaggggagc tggcatttga tataagctca gctgatgttc ggtgttctgt
     1501 ttttaagtgt ttgccaatta ttttggataa caaactgagc cacccattat tagaacagct
     1561 tttgccatcg ctcaggtaca gtctccatga taacgcagag aaagtgcggg tggcttttgt
     1621 ggatttgctg ctgaaggtca aggctgtgag agctgcaaag ttttggaaaa tatgcccaat
     1681 ggaggacatt ttggttcgcc tggaaatgga ttctcggcct gtgtctcggc gcctggtgag
     1741 cctcatcttc aactcttttc tgcccgtcaa ccagccagag gaggtgtggt gtgaacgctg
     1801 tgtcaccctg atccagatga accgtgcagc tgccaggagg ttctatcagt acgcccatga
     1861 gcacaccgcc agcaccaaca taggtctgca tctctgcctc tctcgtgtct cgctgcctct
     1921 cccacaaagt gcatggtcca gatgctcagt gttctcactc acaaagctca tccatgtcat
     1981 ccgtcactgc ttgaacgcct gtatccagag gaccctgaga gagggcgcag agacccataa
     2041 ggagtgcgag aaggagaacg ccagtgtact agacaaaacg ttgtcagtga atgacactgc
     2101 atccatggca ggtttgctag aaatcatcgt gatcctctgg aagaatatcc acaggagtct
     2161 ggaaaacaat aaagaggcca aagcttatac cattaacaag tttgcgtctg tgcttccaga
     2221 gtacctgaag gtattcaagg atgagcgctg caagatccct ttgttcatgc taatgtcctt
     2281 cttgccagcc tctgctgtcc ctgtgttcag ctgtggtgtg atttctgctc tgagaaatca
     2341 ggaggagagt gttacaggca ggagctactg taccttgctc gattgtctct gttcctgggg
     2401 gcaagtgggg catgtcctgg agctcattgt ggactggctg cctacagtgc caccgcaagc
     2461 caagagtaat ttggcctcta aacgaaaagt gcaaatcaat gacatgtgct cagtgaagcc
     2521 taagttagca ttgttgtaca tggagtactt gctaacccat ccaaagaatc gagagtgtct
     2581 gctctctgca cctcagaaga aactgaacca gcttttaaaa gcacttgagg gatccaaggc
     2641 agatctggaa tcattgcttc agtctccaag tgggaatccc cttaacaaag ccactgccct
     2701 gcatgccttt ggtctgtact gtaggatgag cgtccatctt cagtacaagt tctgctcaga
     2761 agagaaaatt catctgtcca tcctgagtga cactgggtct tggttagaaa acaaagtttt
     2821 acctcttctt gaagaccaag aagaggagta tctgaagctt cagagggatg tttatcaaca
     2881 gataatccag acttacctgg ctgtgtgtaa agatgctgtc atggtgggac ttggagatcc
     2941 taaatttcag gtgcagcttc tacagcggag ttttggaata atgaaaacag tgaaggaatt
     3001 tttttatgtt tcattacttc ttggcattct gaaggagata gctgggaact ccatgattta
     3061 cagaacagat tcagatgaga aggtcacagt gctgtttgac ttagtccagg aggtgtttca
     3121 gaagatgttg gaatgtgttg cctgtgtctt caggaagcag cctgaggaaa gtctgcagct
     3181 ctttcattct gttcagaccc ctcttcatga atttatcacc actatccagt cctggcacca
     3241 ggacactgca gtgcatcacg ctgtgctttc tactctgatc gctgcaccag tggttgagat
     3301 aagtcaccag ctacagaagg tttctgatat agaagagctg acttcaccac aatgtcttgc
     3361 tgaccttcct ccattttcaa ggagtttaat gggagtaata atgaagtctt cggatgtggt
     3421 caggtcattt ttggatgaac taaagacatg cgtaacttcc ggtgacattg aaggcattgt
     3481 gtgcctcaca gctgttctgc atattatttt ggtttttaac agaggtaaac atgtaagtgc
     3541 aaaggtgcag gaagtggcag catccgtgaa cagaaagctg aagaccttta tggagatcac
     3601 tttggaggaa gacagccttg aaagattcct atatgagtca tcaatgagaa ctttgggaga
     3661 atttctgaat tcatgacaaa accaccatct ctgggtgtgt agaaatagag aaaaagagtc
     3721 atgaaagtga aatgtgtgta tatcttcctt gcttttattt tttttcgtca gactaaacgt
     3781 gtagtcctga gtctgtaagg accacagcag gtctgtcggt acccaaagat ggagaccagt
     3841 acagcactgg tgctctacta tacacctgtg cctttaacca gcttgcagag atggagagtg
     3901 caaaatggtg taagagaaag actgtcaagc agcccaccac tcctctccag aagacccagc
     3961 aaagcttatg agaactgtgg agggggcaac tcttacgttc attggcctgt gacttatcca
     4021 ttatttatta tttgttgtga aattctcctg gaacagattt ctctggcctt tccgcagggc
     4081 tatcattagc ccgcacagga cctttcttca agtgacgaaa agaatcactt catcagaata
     4141 ttttactgcc atctgttgta cagttgtaat aaacacacag agtatgtaga gcggatgtga
     4201 agtgtctgct tggcttcgtt gcacttgggc tcagctcaac tcttacacct gagctgtaac
     4261 tataaaaggc gttctcagtc agagagggct ccttgcttga gtgctgctgt gtaccatgca
     4321 cagtcaggga tagagcagga gttaagaaaa gacaaaacaa agcaaaaccc taccgaagtg
     4381 gaagtaaatt gaggaaggcc tgggctagga atgagttgcc acctagaaat gatcgtcgta
     4441 tctcaaggcc acagtggagc gttgctcagt ggatgcacat gcccagttgt ttctgttttt
     4501 gctgtgcggg acaatggcag aggcctttcc ctgtatgatt attgaagagt cagcagagat
     4561 ctcacgagtt aaagaattgc cctggtcctg tgtaagtggt gggttaatga tctgaaagag
     4621 agaaggatcc tgttctaaag tggtgtaatc tgcaaccgtg cataggcaag gacaagccct
     4681 tcatttaaaa atgctgggag aagccatggc gctagctctg tagtagaaga atctcctggg
     4741 cctcagggca atactaggct tctctagcct atgtcactcc ctcagcaccc tttccctagc
     4801 agagactctg gcatagggtt gagtggcctg aatcaggata gagagctcag gggtgactga
     4861 ctgcacttgt gatggtgatg acctcagcag gtgggaagga tgaaaggtag ccagatgaag
     4921 ctggggactt gacatcacac agtattagac agttgtagag cttgaaccag tttgtcttgc
     4981 agacagctat aatgacaaag gcaatgagga tatgtgggaa gttagtaacg ggacttttaa
     5041 tgacatagct gtagatgtaa catactgccg gaaggatcat tagcacaatg agaaggattt
     5101 acatgacata gcttgccttg caacttactg aagacccggg aacaggaaca gaactaaagt
     5161 gttagttgca cttttgacag tatgaccaga tcagcatcga gagagagatt ctccaggaag
     5221 ttggccctga gataattgag acaagaacaa ctaccacaag agcacagagc cttcagtgct
     5281 gatctgattc agagaagact ccaactctct tctggatgga acccacatgg acagaagacc
     5341 ttactactga gcaaatcaca gggttctttt gaacttgctt acggccaaat aaacgagaag
     5401 ctgttgatta cccttcacct cttaggactt ttaaaaatac cgtgattgga ttgttttagt
     5461 tctcttattt ttgtgaggtg aagaaaggag aaggaagaca gatatcaaga tgtctggtcc
     5521 ctgaaagtta gatgtcagat gatttcaaaa ttatagctga attttttaaa atgctctgct
     5581 tttatattga tgggtgagat ctgcaatatt gttcatgtta atagacaaaa aggaacatca
     5641 gcaatatctt gtttaattta tagacgaacg agtgtatttg tagtactttg agattttaaa
     5701 gactgttgaa tgctaatccc cagacgttac ctttaccctc agtctgaata ctctcgtgaa
     5761 ttgagttgga ccactgttac ctttgtaaga agtaataaga ttatgtttta aaagcaattt
     5821 ttctggtgta gttgcttatg catggcacag tttggatagg tagtgttatt ccttggtcaa
     5881 aatatgtcag ttaaatattg aaaatggttt ggaattatta ggcttatttt tcttgctatt
     5941 aatcttgtta gtagaggcat tacataaaga ttgggctgat aagattaact tttaaaaata
     6001 tccctgctaa aaaaaagtat gtctgaaggc cctgttaaaa aaaagaagca aaaacaactg
     6061 ggaggagtac acagcaggag ataaacaaac tcatgaaaga gtctgaaggt gaaacctcaa
     6121 gagaccatct cagacagaaa gggactccat gtggagggat ggtgtcaaca accccccttc
     6181 aaggagctgt agggaatggc agtgcaaaac aaagcccaac agtgtcaact aacccagaat
     6241 cccgggattt cccagagtct gctctaccaa ctgaagattt acaaaggctg gatccaggcc
     6301 caatgaatgt atgtcgaaga ggacttctgt tttggtctca gtgaaagagg atgtgcctaa
     6361 tcatagagga acttgatgct aagaaaatgg ggatacgtgg agggtagagg gaagaaggga
     6421 ggcctgtttc aaagcaaagt ggaggagtaa ggaaatgaag aaatctggga aagagggcca
     6481 ggaggtaagg caacatttat aatggaaaga ttaaaagtta atttgaaatt attactgaaa
     6541 taaattttaa aatattactg aaaggaaaaa aaatccctgc taaaaacaag gcctttaact
     6601 gacctgagaa gttggctatt tcttttcttt cttttttttt tttttttt
//
