LOCUS       XM_003750132            7458 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NBAS subunit of NRZ tethering complex
            (Nbas), transcript variant X5, mRNA.
ACCESSION   XM_003750132
VERSION     XM_003750132.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 24, 2024 this sequence was replaced by
            NM_001427446.1.
            
            On Jan 21, 2021 this sequence version replaced XM_003750132.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7458
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7458
                     /gene="Nbas"
                     /note="NBAS subunit of NRZ tethering complex; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 29 ESTs, 1 long SRA read, 1 Protein, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 124 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:690073"
                     /db_xref="RGD:1585140"
     CDS             47..7120
                     /gene="Nbas"
                     /codon_start=1
                     /product="NBAS subunit of NRZ tethering complex isoform
                     X5"
                     /protein_id="XP_003750180.1"
                     /db_xref="GeneID:690073"
                     /db_xref="RGD:1585140"
                     /translation="MAAPESAPALSPGSADEEETILYDLLVNTEWPPETEVQPRGNRK
                     HGASFIITKAIKDHLLFLRQYIWYSPAPFLLPDGLVRLVNKQINWHLVLANNGKLLAA
                     VQDQCVEIRSAKDDFTSIIGKCQVPKDPKPQWRRVAWSYDCTLLAYAESTGTVRVFDL
                     MGSELFVIAPASVFAGDLSYAIAGLVFLEYKASAQWSAELLVINYRGELRSYLVSVGT
                     NQSYQESHSFSFADHYPHGVNTAIYHPGHRLLLVGGCETAELGISKASSCGLSAWRVL
                     SGSPYYKQVTNGGDRVTEVPKTLGLLKLLSVKFYTRQGQEQDGIFKMSLSPDGSLLAA
                     IHFSGKLSIWAIPSLKQQGVWRQDEQPGYDELNPDWTLSPEKRKKVKDKESFYPLIDV
                     NWWADGAVTLARCSGALTVSSSKSLKNLLGKSCEWFEPSPQVTATHDGGFLSLECEIK
                     LAPKRSRVEMRAGEEDEGDVDSDWDHETSAKARYFGYIKQGLYLVTEMERFAPPRKRP
                     RTITKNYRLVSLRSTTPEELYQRKIESEEYEEALSLAHTYGLDTDLVYQRQWRKSAVN
                     IASIQNYLSKIKKRSWVLHECLERVPENVDAAKELLQYGLKGTDLEALVAIGKGVDDG
                     RFTLPGDVDLDGITYEELSPPHKEPAQSKRQKELKKRHELLKLVNFSKLTLEQKELCR
                     CRLKLLTFLDRLATYEEILGAPHASEQRYDAEFFKKFRSQNIVLSARTYARESNVQAL
                     EILLTYHGSDLLPHRLAILSNFPETTSPHEYAVLLPEACWNNDSLMIIPWAEQKHRAE
                     DWCEELECRMVVEPGLQDDSEFLYAAQPELLQYRTPQLTVEKAMAWYRSRAQDIEHHA
                     GQVDCALSLVRLGMERHIPGLLTLCDDLVTLETLVYEAGCDFTLTLKDLQQMKDFEKL
                     RLLMERCSEDNYVTSAYQWMVPFLHRCEKQSAGAANELLREYLVTLAKGDLKLPLKIF
                     QHSKPDLQQKIIPDEDQLMAIALECIYNCERSDQLSLCYDILECLPQRGCGLNTKVTS
                     SLHDMVDQLEKILSVSELLKNHGLEKPVSFVKNTQSSSEEARSLMVRLTRRTGRKQPS
                     VGESHWRMLLQDMLTMQQHVYTCLDSSACYEIFTESLLCSSRLENIHLAGQMMQCSAC
                     SDNLPAGVVHKGKPQYRVSYERSIDLVLAASREYFNSSTSLTDSCMDLARCCLQLITD
                     RPAAIQEELDLIQALGYLEEFGVKILPLQVRLCSDRISLIKECVSQSPTCYKQSAKLL
                     GLAELLRVAGEDPEERHGQVLILLVEQALNVHDYKAASTYCQELMAAGYPDSWDVCSQ
                     LGQAEGFRDLATRQELMAFALTHCPPSSIELLLAASSSLQTEILYQRVNFEIHPEGEN
                     INVVSPLTGKVLQEDDTSLGSSSADLLQWTTATTMRVLSNTTTTTRAVLQAVSDGQWW
                     KKSLAYLRPLQGQDFGGAYRIGTVANDDLERQGCHPFYESVIANPFVTEVPVESLAEV
                     LLRTGKLAEAKAQVFPTTEVLLQLASDALPNDMTLALAYLLALPQVLDANKCFEKQAH
                     SALSLQLAAYYYSLQIYARLAPCFRDKCHPLYRVDPKELIKMVTRHVAQHGHEAWPED
                     LLSLTRQLHYYNERLLDFTQAQLLQGLRKGVDVQRFTADDQYKRETILGLAETLEENV
                     YSIALSLAQRYSISQWEVFMTHLEFLFSDSGLSTGEIEKRAQALHLFDTLKTDPESFH
                     KHMVKYIYPTIEGLDHERLLYYFTLLESCGCADFETAAIKPEIHIRLLKKFKVVASGL
                     NYKKLTDKSEDALEALEPVLTSQNILSISKLAPRIPEKEGQMLSPSSLYTVWLQKLFW
                     TGDPHLIKQAPESSAEWLHAYDVCLKYFDRLGPHDLITVVDAITFSPKAVSKLSVEAR
                     EEMTRKAIKTVKHFIEKPRKRNSEEDPQEGSGSQATYADALAHLETSLAHLETLSHSF
                     ILSLKNSEQEVLQKYSYLYDLSRAEKGKLNDQAVAMCLDGQPLRMIQQLLEVAIGPVN
                     ISPKDVVHTAITQIISSLSGTGADLCGSRDPLQVLEGVVGAVRTSVDNGEELVSAEDL
                     LQWLRPFCAEDSCPVRPRIQVLQLLGQSFHLSEEDNKLLVFFRTEAILRAAWPQRQVD
                     VADTESEESRHSLFMELLESSHHEVEFQHLILLLQAWPPMKSECVIANNLWVRLVTVM
                     LTRCTTENKQRLGDEVLKICRSLYNSGQMLPVQGVKELCLLLLHQSLLLPSLKLLLES
                     GDETLQAMALEQISAVTKVNDSNCDQELLSLLVDARLLVKCVSTPFYPHIIAHLVANN
                     QQGRWNAEELARHLQEAGHEAEAGSLLLAVQGTHRVFRTFSTALSALRQWV"
ORIGIN      
        1 gaggtgccgt agtgcccctc cctccaccac tctgtttcag gccaacatgg cggcccccga
       61 gtcggcgccg gctttgagtc cgggctctgc agacgaggag gagacgattc tctatgactt
      121 gctagtcaac accgagtggc cacccgagac agaagtgcag cccagaggca accgaaagca
      181 tggtgcatca ttcatcatca caaaagcaat caaagatcat ctgttatttt tgcgtcagta
      241 catctggtac agccctgccc cgtttttgct tcctgacgga ctggttcgct tggtcaataa
      301 acagataaac tggcatttgg tactcgcaaa caatggtaaa cttctggctg ctgttcaaga
      361 tcagtgtgtg gagatcaggt ctgcaaaaga tgattttaca tcaattattg ggaaatgtca
      421 agttccaaaa gacccgaagc cccagtggag acgagtggca tggagttacg actgcacact
      481 gctggcctat gctgagagca cagggactgt aagggtgttt gatctcatgg gcagcgagct
      541 ctttgtcatt gccccggcgt ctgtctttgc tggggactta agctacgcca ttgctgggtt
      601 ggtattttta gaatacaaag caagtgcaca gtggtctgca gagctcttgg tcatcaatta
      661 ccgaggagaa cttagaagtt accttgtcag tgttgggaca aatcagagct accaagagag
      721 tcacagtttc agctttgctg atcattatcc gcatggagta aataccgcta tttaccaccc
      781 tggtcatagg cttttactgg ttggtggatg tgaaactgct gaactgggca tttctaaagc
      841 ttctagctgt ggcctttctg catggagagt cctctcaggc tcaccgtatt ataagcaagt
      901 tactaatggt ggagacaggg tcaccgaggt gccaaagaca ctgggattat taaagctgtt
      961 aagtgtcaag ttttacactc ggcagggaca agaacaggat ggaatcttca agatgagcct
     1021 ttctcctgac gggagcctcc ttgcggcaat tcacttctca gggaagttga gcatctgggc
     1081 tattccgtct ctgaagcagc aaggcgtctg gcggcaagat gagcagccag gctatgatga
     1141 gcttaatcct gattggacat tgtctcctga gaagagaaag aaagtaaaag ataaagagtc
     1201 cttttatccg ttgattgatg tcaattggtg ggcagatggc gcagtgacct tggctcgatg
     1261 ctctggtgca ttaactgttt catcatccaa aagtttgaag aatttactag gaaaatcctg
     1321 tgaatggttt gagccatccc cacaggtcac tgcaacccat gatgggggat tcttaagttt
     1381 ggagtgtgaa attaaacttg cccccaaacg gtctcgagtg gagatgaggg ctggagaaga
     1441 ggatgaaggc gacgtggatt ctgactggga tcatgaaacc tctgccaagg ctcgctattt
     1501 cgggtacatc aagcaaggcc tttacttagt gacggagatg gagaggttcg cacctcctcg
     1561 gaaacggcct cgaactatca cgaagaacta ccgccttgtg agtctgcgct ccacaacccc
     1621 agaggagctt tatcagagga agattgaaag tgaagagtat gaagaagcct tgtctttggc
     1681 tcacacttac ggcctggata ctgaccttgt ctatcagagg caatggagga agtcagctgt
     1741 caacattgct tcaattcaga attacttgag taaaatcaag aagcggtctt gggttctcca
     1801 tgagtgtctg gagagagttc ctgagaatgt ggacgctgcc aaggaactgc tgcagtatgg
     1861 cttgaaaggc acagacctgg aggctctcgt cgctatagga aagggcgtgg atgatggcag
     1921 atttacctta cctggtgacg tagaccttga tggcatcacc tatgaggaac tttccccacc
     1981 acacaaagag cctgcccaga gcaaacggca gaaggagctc aagaagagac atgaactgct
     2041 caaattagtg aacttttcaa agttgaccct ggaacaaaag gagctgtgcc gttgtagact
     2101 caagttacta accttcttag atcggcttgc aacctatgag gaaatcctag gggcgccgca
     2161 tgcatctgaa cagagatatg atgctgaatt ttttaagaag ttcagaagtc agaatattgt
     2221 tctctcagca agaacgtatg ctcgggagag taatgtacaa gctctggaaa tcctgctgac
     2281 ataccatggc tctgatctgc tacctcatcg ccttgctatc ctctccaact ttccagaaac
     2341 cacctctccc cacgaatacg ctgttctgtt gccggaggct tgctggaaca atgactcctt
     2401 gatgatcatc ccttgggctg agcagaaaca ccgagctgaa gactggtgtg aggaactgga
     2461 gtgcagaatg gtggtggagc cgggcctgca ggatgacagt gagttcctgt acgctgcgca
     2521 gcccgagctt ctgcagtaca ggacacccca gcttaccgtg gagaaggcga tggcctggta
     2581 tcggagccga gcacaggaca tagagcacca cgccgggcag gtggactgcg ccttgtcact
     2641 cgttcgcctt ggaatggagc gccatattcc tggcttgctg actctctgtg acgatttggt
     2701 gacactggaa acactggttt atgaagcagg ctgtgacttc accctcactc tgaaagacct
     2761 gcaacagatg aaagactttg agaagctgag attactgatg gagcgttgtt ctgaggacaa
     2821 ctacgtgacc agtgcctacc agtggatggt tccttttctc caccgctgtg agaaacagtc
     2881 tgctggtgcg gccaacgagc tactaagaga atatctagta actttagcta agggagactt
     2941 gaaacttccc ttgaagatat ttcagcattc taaaccagat ctgcagcaaa aaattattcc
     3001 tgacgaggac cagctgatgg caatcgcact cgaatgcatc tataactgcg agcggagtga
     3061 ccagctctca ctctgctatg acatcttaga atgcctccca caaaggggat gtgggctcaa
     3121 tacaaaggta acctcatctc ttcatgacat ggtagaccaa ctggagaaaa ttctcagtgt
     3181 gtctgagctt ttgaaaaacc atggactgga gaaaccagtt tcgtttgtga agaataccca
     3241 gtccagctct gaagaggctc gcagcctaat ggttcgactg accaggcgca ctgggcggaa
     3301 gcagccttcc gttggggagt cacactggag aatgctactg caggacatgt tgaccatgca
     3361 gcagcacgtg tacacgtgcc tcgattccag tgcttgctat gagatattta cagaaagcct
     3421 tctttgctcc agtcgcctgg aaaacatcca tctagcaggg cagatgatgc aatgcagtgc
     3481 ctgttcggat aatcttccag ctggtgtggt ccataaagga aaaccccagt acagggtcag
     3541 ctatgagaga agtattgact tggttttggc tgccagtaga gagtacttca actcttccac
     3601 cagcctcact gacagctgca tggatctggc caggtgctgc ttacagctca taacggacag
     3661 gccggccgcc attcaggagg aattagacct catccaagcc ctggggtatc ttgaagaatt
     3721 tggggtgaag atccttcctt tgcaagtacg gttgtgttct gaccgaatca gcctcatcaa
     3781 ggagtgtgtt tcccagtccc ccacatgcta caaacagtca gccaaacttc taggccttgc
     3841 tgagttgctg agagttgcag gtgaagaccc ggaagaaagg catgggcagg ttctgatcct
     3901 gttagtggag caagcgctca atgtccatga ctacaaagca gctagtacgt attgtcagga
     3961 gctgatggcc gcaggatatc cagacagttg ggatgtttgc agccagctgg gccaagcaga
     4021 aggtttccgg gacctggcca ctcgtcagga gctcatggct ttcgctttga cacattgtcc
     4081 tcccagcagc attgagcttc ttttggcagc tagcagctct cttcaaacag agattcttta
     4141 tcaaagagta aattttgaga tccatcctga aggagaaaat attaatgttg tctcaccctt
     4201 aactggtaaa gttttacaag aggatgatac ttctttgggc agcagttcag cagacctgtt
     4261 acagtggacc actgcaacca ccatgagagt cttgtccaat accacgacta ctaccagggc
     4321 tgtgctgcaa gctgtcagcg atgggcagtg gtggaagaag tccttggcat acctgcggcc
     4381 cctccagggg caggactttg gtggagcata tcgaattgga actgtagcca atgatgatct
     4441 agaaagacaa ggatgccacc ctttttacga gtcagtcatt gctaatccct ttgtcactga
     4501 ggtccctgtg gaaagtcttg ccgaagtgtt gctgagaact ggaaagctgg cagaggccaa
     4561 ggcacaagtg ttcccgacca cagaagttct cttgcaacta gcaagtgatg ctttgccgaa
     4621 tgacatgaca ttggctcttg cttatctcct tgccttgcct caggtgttgg acgctaacaa
     4681 gtgcttcgag aagcaggctc attcggcact gtctctccag ctggcagcgt actactacag
     4741 cctgcagatc tatgcccggt tggctccatg tttcagggac aagtgccatc ctctttacag
     4801 ggttgatccc aaggaattaa tcaagatggt gaccaggcac gtggctcagc atgggcacga
     4861 agcctggccc gaggacctct tgtcactgac caggcagctg cactactaca atgaacgcct
     4921 tctggacttc acccaggctc agctcctcca gggcctgcgg aagggcgtgg acgtgcagag
     4981 gtttaccgct gatgaccagt acaaaagaga aaccatcctg ggccttgcag aaacccttga
     5041 ggaaaatgtc tacagcattg ctctttccct ggcacagcgg tacagtatct cacagtggga
     5101 agtcttcatg acccatttgg agttcctgtt cagtgatagt ggtttgtcca caggagaaat
     5161 tgaaaagcga gcccaagctc ttcatctctt tgacactttg aagacagatc ctgagtcctt
     5221 tcataaacac atggtcaagt atatctaccc caccatcgag ggtcttgatc atgaaaggct
     5281 gctgtattat ttcactctct tggaaagctg tggttgtgcg gactttgaaa cagctgctat
     5341 caaaccagaa atccatatcc gcctcctgaa gaaatttaaa gttgttgcat caggtcttaa
     5401 ttataagaag ctgactgata aaagcgagga tgcactggaa gcactggagc ctgtgctcac
     5461 gagtcagaat atcttatcta tttccaaact tgctcccaga atccctgaga aggaggggca
     5521 gatgctgtct cccagctctc tgtacactgt ctggttgcag aaattgttct ggactggaga
     5581 tcctcacctc atcaagcagg ctccggagtc ttccgcagag tggcttcatg cctatgacgt
     5641 ctgcctgaag tactttgatc gactcggtcc tcatgacctc atcactgttg tggatgcaat
     5701 tacattttct ccaaaagctg tgtccaagct atcagtagaa gcacgtgaag agatgaccag
     5761 aaaggccatt aagacagtca agcatttcat agaaaaacca aggaaaagaa attcagaaga
     5821 agacccccaa gaaggtagtg gttctcaggc cacctatgca gatgccttgg ctcatctgga
     5881 gacgtcactt gcccacctgg aaaccctcag ccacagcttc atcctcagtc tgaagaatag
     5941 tgagcaggaa gtactgcaga aatacagtta tctctatgat ctgtcccgag cagaaaaagg
     6001 gaagcttaat gaccaagctg tggccatgtg tttagatggc cagcctctaa ggatgattca
     6061 gcagctgcta gaagtggcca ttggtcctgt caacatctca cccaaggatg tagtgcacac
     6121 tgcaatcact caaataattt cttcattgag tggcactggt gctgatcttt gtgggtcacg
     6181 tgaccccctc caggtcctgg aaggtgttgt tggggcagtt cgcaccagtg tggacaatgg
     6241 ggaggagcta gtgtctgctg aagacctgct gcagtggctg cggcctttct gtgctgaaga
     6301 ctcttgtccc gtgaggcctc gaatccaggt gctccagctc ttggggcagt ccttccacct
     6361 gagtgaggag gacaacaagc tcctggtgtt ctttcgaaca gaagccattc tcagagcagc
     6421 atggcctcag agacaggtgg atgtagctga cactgagagt gaagaaagcc ggcactctct
     6481 attcatggag ctcctggaat ccagtcacca tgaggtcgag tttcagcact tgattttact
     6541 cctgcaagcg tggccaccca tgaaaagtga atgtgtcata gccaacaacc tgtgggtgag
     6601 gctggtgact gtgatgctga ccagatgtac aacagagaac aagcagagac ttggagacga
     6661 ggtgttgaag atctgccgct ccctctacaa cagcggacag atgctgcctg tgcagggtgt
     6721 gaaggagctg tgcctgctgc tgctgcacca gtccctcctg ctcccatccc tgaagcttct
     6781 tctggagagt ggagatgaaa ctctacaggc catggccctg gagcaaatct cagctgtcac
     6841 taaggtgaat gactctaatt gtgaccagga gctgctttcc ctgctcgtgg atgccaggct
     6901 gctggtgaaa tgtgtctcca cacccttcta cccacatatc attgctcacc ttgtggccaa
     6961 caaccagcag gggcgctgga acgcagagga gctggctaga cacctgcagg aggccggaca
     7021 tgaagctgaa gctggctcac tcctcctggc tgtccagggg actcatcggg tgttcagaac
     7081 tttcagcact gccctcagtg cactgaggca gtgggtgtga gcacagccac ccatgacctt
     7141 gctcctggca ggagagagca tcagacccca aagccatgcc cgaagcagca tttgtagcaa
     7201 ttaattgttc tcagcatttc taataagtca tgaataaagg tatatgtata tatataaatg
     7261 gcaaccaatg cccttcaagt actttctcat actgatgggt tagcatactc tgttattatc
     7321 gtggattttt tttgcctttt taaatttttc ttttctgagt agaacccagt taattgaatg
     7381 ggaaactata cttaagaaaa ttgagaatgg tggtgcactg tatgagagag tatggtatat
     7441 taaatggctt ggatgaaa
//
