LOCUS       XM_039107241            3901 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus N-acyl phosphatidylethanolamine
            phospholipase D (Napepld), transcript variant X3, mRNA.
ACCESSION   XM_039107241
VERSION     XM_039107241.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3901
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3901
                     /gene="Napepld"
                     /gene_synonym="NAPE-PLD"
                     /note="N-acyl phosphatidylethanolamine phospholipase D;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 mRNAs, 8 ESTs, 9 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:296757"
                     /db_xref="RGD:735197"
     CDS             241..1491
                     /gene="Napepld"
                     /gene_synonym="NAPE-PLD"
                     /codon_start=1
                     /product="N-acyl-phosphatidylethanolamine-hydrolyzing
                     phospholipase D isoform X3"
                     /protein_id="XP_038963169.1"
                     /db_xref="GeneID:296757"
                     /db_xref="RGD:735197"
                     /translation="MHLAGDRTQGLELPSFPRKDMDENENSQSPAPSHQYPKETLRKR
                     QNSVQNSGGSESSRLSRKSFKLDYRLEEDVTKSKKGKDGRFVNPWPTWKNVSIPNVLR
                     WLIMEKDHSSVPGSKEELDKELPVLKPYFISDPEEAGVREAGLRVTWLGHATLMVEMD
                     ELILLTDPMFSSRASPSQYMGPKRFRRPPCTISELPPIDAVLISHNHYDHLDYGSVLA
                     LNERFGSELRWFVPLGLLDWMQKCGCENVIELDWWEENCVPGHDKVTFVFTPSQHWCK
                     RTLLDDNKVLWGSWSVLGPWNRFFFAGDTGYCPAFEEIGKRFGPFDLAAIPIGAYEPR
                     WFMKYQHADPEDAVRIHIDVQAKRSVAIHWGTFALANEHYLEPPVKLNEALERYGLKS
                     EDFFILKHGESRYLNTDDKAFEET"
ORIGIN      
        1 ccgcccaccc gcgcagcgca ccgcctcccg ggaagcctga acgcctgcgg gagagcctcg
       61 gtgctgttat cctggatcct cgcgggaggc ggttcgccgt ccgtggttct ccttctcagg
      121 tttgctcctt cgtcccagta tcggcgtgga gcagcctttc tggggctgtt tggacacctc
      181 gttgaagtgc agcgggtttc gagtaggttt cttgcaccca agccctgcct cctcctggag
      241 atgcacttag ctggggaccg aacccagggc cttgagcttc ctagcttccc acggaaagac
      301 atggatgaaa atgagaacag ccagtctcca gcgccaagcc atcagtatcc aaaagaaaca
      361 ctgaggaagc gtcagaattc agtgcagaat tcaggaggaa gcgagtcttc caggctctcc
      421 aggaaaagct tcaagctgga ctacagactg gaggaggacg taaccaaatc aaagaaagga
      481 aaagacggga gatttgtgaa cccatggcca acgtggaaga acgtctctat cccaaacgtg
      541 ctcagatggc tgataatgga gaaagatcac agcagtgtcc cgggttccaa agaggagctt
      601 gacaaagaac tcccagtgct taagccttat tttatcagtg acccggaaga agctggagtg
      661 agagaggctg gcctacgagt cacgtggctg ggacacgcga cgctgatggt ggaaatggac
      721 gagctcatcc tcctcacgga tcccatgttc agctctcgag cctctccctc gcagtacatg
      781 ggtccgaagc ggttccgccg tcccccgtgt accataagcg aactgccccc aatagatgct
      841 gtcctcatta gtcacaacca ctacgaccac ctggactacg gctctgtcct ggctctgaat
      901 gaacggtttg gcagtgagct gaggtggttc gtgccgctgg gccttctcga ctggatgcag
      961 aagtgtggct gtgagaacgt gattgagctc gactggtggg aggagaattg cgtccctggc
     1021 catgataagg tcaccttcgt tttcacgccc tcccaacatt ggtgtaaaag gaccctcctg
     1081 gatgacaaca aggttctgtg gggcagctgg tctgtgctag ggccttggaa tcggttcttt
     1141 ttcgctgggg atactggtta ctgccctgct tttgaagaga ttggaaaaag gtttggtcct
     1201 tttgacctcg cggctattcc cattggagct tatgagccaa ggtggtttat gaaataccaa
     1261 catgctgacc cagaggatgc tgtaaggatt cacattgacg ttcaagccaa gagatccgtg
     1321 gcgattcact gggggacttt tgccttagct aatgagcatt acttagagcc gccggtgaaa
     1381 ctgaatgaag ctctagagag atatggactc aagagtgaag acttcttcat cctgaagcac
     1441 ggagagtcac gatacttgaa taccgatgat aaagcctttg aggaaacatg aaagtcggaa
     1501 ttatcagtgg aagcatgaaa agactaagaa agtaacaaat attacgacac tttccacgag
     1561 gaaacaattt ctgcaagtgt gtgttttgtt ctgtatcata acttgccaat tgataagatt
     1621 tgcttacata aactgtggga gtctagggat gggctattta agaaactgtc caatatggac
     1681 tttaaaaaaa tcataccaat gatacagaca ttgcaaaatc ttatttttta tcagaacact
     1741 ctattttagt ggcagtaaaa tttctgaggt tgtgaaaaac tgacattaca gttctatttc
     1801 tttttctatt cagggctttc tataatggtc agtcaagctt tacctaccga gatcacacac
     1861 agacacacac acacacacac acaccacacc cccacacaca caccacaacc cccccacacc
     1921 acacacacac acccccacac ctcccacaca cacaccacac acacacacac tcttatagtc
     1981 acatgataag cttgccctcc tcacggtgac taactgctgg tcatggtgat gcacatctgc
     2041 agcctagcgc tccaaaggat aaagcaggca ggtgacaagt tcaaggccaa ctggagccac
     2101 aagtgagatg aggaaacatt agcttacatg ccaaatgtta agtgatttta ttttgttaag
     2161 tataagaaca taggtgttag gactaaattt attgtttttt aaaatagatt tttttattgt
     2221 ggtcagatat acattgcata aaattgtcgt tttaactatg gtgaaaagca gctctttggc
     2281 cccaggcatt cacatttttt gtgcagccat gagcacagag tacttacatt tctaagaggg
     2341 catcatctac acagctgcac ttcccaggtt gaggccgatc ggcagggaag ggaagagtgg
     2401 gtttgagact tagagcaagg gtttaatttc aaaggcagac tttctgccaa gcacagctgt
     2461 aactaaggta tctcccagag gagagcgtag agcctgaatg tgaatacagc acgcaccgga
     2521 attatttcct tttctacttc ctctatacac attctctttc ctgctctcag ctccaacccc
     2581 agatatgtca gtacgattta taagtatgtt ttacatgact tggaggtggt atatatattt
     2641 ttatattaaa tgacctataa gcacaattgt acctttagta agccattgtg aaatacctgg
     2701 ttgttgtctt tttaagactg tgggatctgc tgaacagagt ctttgtccca gcatgcctct
     2761 gcactcacag gtttgttatg agcctcgagg aagtgagctg ctggggtatt agggcattca
     2821 gtcttctaga ccaatggtac aaaacacagc acgttttctc tatgtcaaac attgtatagg
     2881 gaatactcag taatttgatg catttgcatg ggtgatgcat gccaccttgg cctctcatca
     2941 gaatttcgtc catcccttcg tggacctgat taccccacaa tatgtaactt acgtgtggac
     3001 ccaatattgc catgcacaag aggacaagtt aacctacctc cgaaggcaga gaataattct
     3061 ttttttcaag cactttagaa atccgaggga gaaaacttaa gatatcactc tgatacagac
     3121 cagcacagta gacagctgaa gagcatccca tgatgcattg ctcctgtccg gacaccacct
     3181 cacccactta ccttgtgact tgattgagag gggaagagcc aatgcaagca gtcgtcagaa
     3241 tgtagtattt ttatataaaa tgttcacatc agttgggaaa tgtgtgctgt cacactgcgt
     3301 gtgtagtgaa ctcggcacag aggtactaaa gcacaagatt ccacttaaag tcagcttcag
     3361 ggaaaccggg caagcatcag ctccccactg caagcagaca tgaatctgga ccctagggcc
     3421 gggggtgcca gccttgggca cacagctcca ccgggtacca ctgtagccat tgtgtttctg
     3481 taagccatac tgaaaattct cttaagcaac tgatgtagct taagtgttgc tccgtgaatg
     3541 gccttggcac tgcttgtgtg tccacaccta cggttcgagg ccttcctcat gagcgtgatt
     3601 tgtgttcagg tccccagatt gaactgggcc tgccttgttt gttttttttt ttaggcttcc
     3661 tcatggtttt tgtttctgtt tacatgttaa gctccatgtg ttatgaagtg catcacatct
     3721 ctctaccaca aacaccctag tgaatggttt ccactttatt tttctaatct acatttcaaa
     3781 ggctatatgt gtaaagtgaa aataaatttt gaagaaaatc ttgttagtct aacatacatt
     3841 gtaaaactgt ctagcctact tctaaataaa ataaatatta tggaaggtac ttgagaagat
     3901 a
//
