LOCUS       NM_001400932            3899 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus nanos C2HC-type zinc finger 1 (Nanos1), mRNA.
ACCESSION   NM_001400932 XM_006231687
VERSION     NM_001400932.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Maschi,D., Fernandez-Alvarez,A.J. and Boccaccio,G.L.
  TITLE     The RNA-binding protein NANOS1 controls hippocampal synaptogenesis
  JOURNAL   PLoS One 18 (4), e0284589 (2023)
   PUBMED   37058523
  REMARK    GeneRIF: The RNA-binding protein NANOS1 controls hippocampal
            synaptogenesis.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  AUTHORS   Amadei,G., Zander,M.A., Yang,G., Dumelie,J.G., Vessey,J.P.,
            Lipshitz,H.D., Smibert,C.A., Kaplan,D.R. and Miller,F.D.
  TITLE     A Smaug2-Based Translational Repression Complex Determines the
            Balance between Precursor Maintenance versus Differentiation during
            Mammalian Neurogenesis
  JOURNAL   J Neurosci 35 (47), 15666-15681 (2015)
   PUBMED   26609159
REFERENCE   3  (bases 1 to 3899)
  AUTHORS   Miles,W.O., Korenjak,M., Griffiths,L.M., Dyer,M.A., Provero,P. and
            Dyson,N.J.
  TITLE     Post-transcriptional gene expression control by NANOS is
            up-regulated and functionally important in pRb-deficient cells
  JOURNAL   EMBO J 33 (19), 2201-2215 (2014)
   PUBMED   25100735
REFERENCE   4  (bases 1 to 3899)
  AUTHORS   Bhandari,D., Raisch,T., Weichenrieder,O., Jonas,S. and
            Izaurralde,E.
  TITLE     Structural basis for the Nanos-mediated recruitment of the CCR4-NOT
            complex and translational repression
  JOURNAL   Genes Dev 28 (8), 888-901 (2014)
   PUBMED   24736845
REFERENCE   5  (bases 1 to 3899)
  AUTHORS   Ginter-Matuszewska,B., Spik,A., Rembiszewska,A., Koyias,C.,
            Kupryjanczyk,J. and Jaruzelska,J.
  TITLE     The SNARE-associated component SNAPIN binds PUMILIO2 and NANOS1
            proteins in human male germ cells
  JOURNAL   Mol Hum Reprod 15 (3), 173-179 (2009)
   PUBMED   19168546
REFERENCE   6  (bases 1 to 3899)
  AUTHORS   Bonnomet,A., Polette,M., Strumane,K., Gilles,C., Dalstein,V.,
            Kileztky,C., Berx,G., van Roy,F., Birembaut,P. and Nawrocki-Raby,B.
  TITLE     The E-cadherin-repressed hNanos1 gene induces tumor cell invasion
            by upregulating MT1-MMP expression
  JOURNAL   Oncogene 27 (26), 3692-3699 (2008)
   PUBMED   18223680
REFERENCE   7  (bases 1 to 3899)
  AUTHORS   Strumane,K., Bonnomet,A., Stove,C., Vandenbroucke,R.,
            Nawrocki-Raby,B., Bruyneel,E., Mareel,M., Birembaut,P., Berx,G. and
            van Roy,F.
  TITLE     E-cadherin regulates human Nanos1, which interacts with p120ctn and
            induces tumor cell migration and invasion
  JOURNAL   Cancer Res 66 (20), 10007-10015 (2006)
   PUBMED   17047063
REFERENCE   8  (bases 1 to 3899)
  AUTHORS   Jaruzelska,J., Kotecki,M., Kusz,K., Spik,A., Firpo,M. and Reijo
            Pera,R.A.
  TITLE     Conservation of a Pumilio-Nanos complex from Drosophila germ plasm
            to human germ cells
  JOURNAL   Dev Genes Evol 213 (3), 120-126 (2003)
   PUBMED   12690449
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jan 28, 2022 this sequence version replaced XM_006231687.4.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR26643298.8769.1, SRR26643429.6201.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3899              JAXUCZ010000001.1  269883713-269887611
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q55"
     gene            1..3899
                     /gene="Nanos1"
                     /note="nanos C2HC-type zinc finger 1"
                     /db_xref="GeneID:365494"
                     /db_xref="RGD:1308194"
     exon            1..3899
                     /gene="Nanos1"
                     /inference="alignment:Splign:2.1.0"
     CDS             277..1068
                     /gene="Nanos1"
                     /codon_start=1
                     /product="nanos homolog 1"
                     /protein_id="NP_001387861.1"
                     /db_xref="GeneID:365494"
                     /db_xref="RGD:1308194"
                     /translation="MEAFPWAPRSPRRARAPAPMALVPSARYVSASGPVHPQPFSYWN
                     DYLGLATLITRASDRGSPHEGPGPTPAGPTLGPPEDDEDDDGDEPEAGGRYLGGALEL
                     RALELCAGPAEAGLLEERFAELNPFAGRAAAVLLGCAPSASAASTAEVTPREEPSPAW
                     AAEPRLHATSGATAARLLKPELQVCVFCRNNKEAVALYTTHILKGPDGRVLCPVLRRY
                     TCPLCGASGDNAHTIKYCPLSKVPPPTVRPPPRSTRDNLPSKKLR"
ORIGIN      
        1 ggcgcagcgc gcggggcgca ggaagcgcgc ggggctggag aagagcgcgc gcccgcctcc
       61 gctccgcctc cgtccggggg cgcgggcgca gtggcccggg cggaggatcg cagggggcag
      121 ggccgagaca gcgaggaggg gcacgggaga aagcgggagc gataaaagga agcaagggtg
      181 ccccaccccg cggcaggccg gcgggcaggc tcctgcgtcc cttccgtccg gcccttgccg
      241 gcggcggcgg ggaggcgcgc ggcccgctgc cggcccatgg aggctttccc ttgggcgcca
      301 cgctcgcccc gccgcgcccg cgcccccgcg cctatggcgc tcgtgcccag cgcccgctac
      361 gtgagcgcct cgggcccggt gcacccgcag cccttcagct actggaacga ctacctgggg
      421 ctagccacgc tcatcaccag ggctagcgac cgcggctccc cgcacgaggg gcccgggccc
      481 acgccggccg ggcccacact ggggccgccg gaggacgatg aagacgacga cggcgatgag
      541 ccagaggccg ggggccgcta cctgggcggc gcgttggaac tgcgcgcgct agagctgtgc
      601 gccggcccag ccgaggccgg gctgctggag gagcgcttcg ctgagctgaa cccatttgca
      661 gggcgcgccg ccgcggtgct gctgggctgc gcgccctctg cctccgccgc ctccacggcc
      721 gaagtgacgc cgcgcgaaga gccgagccct gcgtgggcag ccgagcctcg tctgcacgcg
      781 acctccgggg cgaccgccgc gcgtctgctg aaaccggagc ttcaggtgtg tgtgttctgc
      841 cggaacaaca aggaggcggt ggcgctctac accacacaca tccttaaggg cccggacggc
      901 cgggtgctgt gcccggtcct gcgccgctac acgtgccccc tgtgcggcgc cagtggcgac
      961 aacgcacaca ccatcaagta ttgcccactc tccaaagtgc caccgcccac cgtccgcccg
     1021 ccgccgcgca gcaccagaga caacctgcca agcaagaagc tgcgctagaa gcaggctgca
     1081 tcgagctgcg tacacctgaa acctggactc ttctcccgtg gctcaacttg ggaagtcctc
     1141 ttggttttat ggaagccgca ggggcatagc actttcttgt ggagtgatag gtctctgacg
     1201 ttgaaatatt ggattttgtc cctagtttct aaaacgcgca tccagagtgg tgagggctga
     1261 gcggttgttc cactggctga agtgcggtga atgaggcgct gtttactgta tacgtcagcc
     1321 tattttaggt gcgcatccgt atgaattgtc tctgatcttg gatgttttcg ttttatgaat
     1381 ggaggcactt tattaggtct agagtatttt taatagcctc tgaactgagt gtaaaacaat
     1441 tgtatggaat gtcggcaaaa tgactatttt attgtttgat gcaattaatt tattttagtt
     1501 tctcattcta attgcaggta aagcaactta gtacacttcc caatattgag aggatgttcc
     1561 tcctcgtggc ttgtttctgt cctagatggg aggcttaaag gcacaatctg tagcaggtag
     1621 aatacagttc cttatcattt tatgtatcag ctattctact gaattagcaa gtagtccttc
     1681 caacccttaa aattaactgt gccaaggctt aatcatatcg tgtacatatt tggaaatggt
     1741 gctgtttaag agacgtgtat ttatacagtg acagtattat gaatccatta atctcccctg
     1801 taactcctac ttagcatttt ctctatgcac caccccaaag gtccaattct gatgctaagg
     1861 cgtgccctcc tcagaaagga ggaaaccttt tagagcagtg ttaacccacc ttgattgctc
     1921 aagttcaggg ttcctaaata gaaaatgggg aactataatg caataactcg agttctagaa
     1981 agttctactc tgggctgttt gccttccaat ttacagaggg tgtaccagaa taaatacttc
     2041 gatgctgtaa caattgcagt tggatacaag tatcataatc tcccctcttg gtggttccac
     2101 tattactgag agatcctagt ctgcttccag aatactaaaa gatcttcatg caaaagttcc
     2161 taaccctttg ttctcctgta aatctatcat cctgagtgct gggatgtggc acaaagccac
     2221 ttaccatcta gacagaaaag gtgagggtga gttaacataa attcagacat gcaccaacac
     2281 cactctctgc aaataccagt caaaagatta aagcttgcaa tagtcaaatt tagctaggaa
     2341 tacaagtcag gctagactgc ctttcatatt aagcagcaac ttcacagcaa acttactttc
     2401 tgtataaaag aagtcatgtg aaaatactac ctactggtaa aagggaggac attcttagca
     2461 aggaagaaat ctatccctgt tatagcccca cagtcaatgg gcctgggcct aaatttaata
     2521 aaaccatgtt ccttgttttg ctagaaaata tacagtttgt tttggggtga agtttttcaa
     2581 gtcaacataa attcacatcc tctaactgat ctgcctgttc aaaaaggtat tctcgatatc
     2641 aaaagcagta ggtatcaagc caggattgct gtaatcccac cagatgtttc ccaaggtgtg
     2701 tgtgtgtgtg tgtgtggtgc cagtatataa gtacatgagc tgaacaacta tcatgtgtac
     2761 ctaatagcaa ctttgaattt ttggcatttt gccggaacta aaggatgctg acactggccc
     2821 tcctgccctg tggaatatat tgagggatct gagaaatatc ctcaggtagc tgttaacagg
     2881 gagatgctat cagaaaagtg cttctaaaca caaggagcct agttctaccc cagcacctac
     2941 atgaaagtaa gggaatagtc atgcgcctat aaccccagtg ctcatgaggc agaggccagc
     3001 cttgctacat ggtctgagta aaaacatcat ctcataaact atatggtcat ctgaagttgg
     3061 acctccacat tcatctgctg atttgggata atttaagcca aaggtagctg tggtatcgct
     3121 ggagagtaag ggcgctctgc ctggactcac tagcaaggca gtctagctcc aggtatgaaa
     3181 actccaattc aaagaaacac cttgttgaaa ctgaagtaga atatgattgg gtagggtaac
     3241 ctttgacctc tgacctctat gtacttgcac acagtgtatc ccatatcgtg ttctccaacc
     3301 catgccaagt ctgtttccca gctaacagat actgaagtgt acaatataag caaaaaaaaa
     3361 aaaaaaaagt ccttgttttt ctagtgttct agagaaaact tacccctaaa aataatcttt
     3421 taatcctgac gctcaggagg cagaggaagg ctaagcaagc cttgcaatgt tataaaggtt
     3481 ttgcaaaaat gtttacaatt gatatccaag tttagggcca ggggttttgc tcaatgatag
     3541 agcacttacc tagaatgcac agaaccctag gatcaatacc cattattaaa gggacaaaaa
     3601 tgaaacgtaa aacccaaagt ttcatgcaac actttgataa agttggcttc tgcccttagt
     3661 aagaatgcac tgtggatctg gctacaccac aaaaaggcac agcattgtaa cagcttcacc
     3721 atgggcagag gcacagtttg tgctgtgctt tagcctgcat ttgtctgtcc aaatgatttt
     3781 aacagctttt tagttttttg tactttattt ttcctataaa gtccttttca gaagttaaat
     3841 ggctttgatt agaacttgtc agatatatta aaccaaaacc atgtatttca aaactaaaa
//
