LOCUS       XM_001068528            4859 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NALCN channel auxiliary factor 2
            (Nalf2), mRNA.
ACCESSION   XM_001068528
VERSION     XM_001068528.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 31, 2024 this sequence was replaced by
            NM_001427609.1.
            
            On Jan 21, 2021 this sequence version replaced XM_001068528.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4859
                     /gene="Nalf2"
                     /note="NALCN channel auxiliary factor 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 ESTs, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 127
                     samples with support for all annotated introns"
                     /db_xref="GeneID:688841"
                     /db_xref="RGD:1584125"
     CDS             1005..2420
                     /gene="Nalf2"
                     /codon_start=1
                     /product="NALCN channel auxiliary factor 2"
                     /protein_id="XP_001068528.1"
                     /db_xref="GeneID:688841"
                     /db_xref="RGD:1584125"
                     /translation="MFRGAWMWPGKDAAALTICCCCCCWAPRQSDKPCADSERAQRWR
                     LSLASLLFFTVLLTDHLWLCAGARPRARELSSAMRPPWGAGRERQPVPRRAVLPLPPP
                     SPGEPSASSGTCGPRYSNLTKAAPAAGSGPVCDGVPEPTGLDAACTKLESLQRLFEPT
                     TPAPPLRPPDSPSRAPEFPSAKKNLLKGHFRNFTLSFCDTYTVWDLLLGMDRPDSLDC
                     SLDTLLGDLLAVVASPGSGTWEACSNCIEAYQRLDRHAQEKYDEFDLVLHKYLQAEEY
                     SIRSCTKGCKAVYKAWLCSEYFSVTQQECEHWVPCKQYCLEVQTRCPFILPDNEEMVY
                     GGLPGFICTGLIDTSPKRPETKCCDVQWVSCESEKKKFKDSEPPKTHHQQFHHSYFHH
                     YHQQYHHYHPRHEPPSRVSNKPSLLPVSGGSRLSPSRIRLCVLVLMLLHTVVSFSSSQ
                     GGGGLGLETLPALEEGLTQEE"
ORIGIN      
        1 tggggagggg ggagtcctga ggcgcaggcg cagtcggggc cccagtcccg ctccctcctc
       61 ctcccggtgc ctctttctcc gccctgctcc cccccaaaca cactcgcaca cgggctctca
      121 aggtgttctc cgcacagcgg aagatggcga cagactgagg gggcatggcc agcgggagcc
      181 acggggccat gcctttgggc ggctgccaca gcggtgcgaa gcagaggcgg aagcgagagg
      241 cgcactaagt aaagccgggc gtccgcgtcc ggcgtctgtg gcgctgcggg gagccaggtg
      301 gcccgcccga gccggaactc cgggagccgc gggtgcggag ccagagcgga gccggcccgg
      361 gaccagcccc ggcggactgc cagagcgcga ggaaagcccg aagggccggc ggcggaccgg
      421 ccggccggcc taggagggca cgagcaaggc ggggagctgc acggagcggg cagcgggcag
      481 cgggcagacg ggcgggagag gagcggcgcg ggcgagggga gcagagcgga gcgcggcggg
      541 gcccgcacgg cggcgctgag gggcgcagag ccgcgctgag ccgagacgga cggacggagc
      601 agagtacgag ccagggggcc gggggcgcgg agtgaagtgg cgcggagccc agggcagctg
      661 aggggcccga cactatgagg agtgcggcgc cgccgccgca gccgccaccg ccccagtgcc
      721 ccgcaccgcc ccccgccggg acgccgggct gcgcctagcg ggccgggcgg cggcgccccg
      781 gctgccagca ggggagcgcg ggaggggcgc ggggacggcc cgagagcgcc ccgccactct
      841 ggcctgagcg gggccccggg ccggccggcc tgtctagcca tgcagccccc gaggtagagc
      901 ctggacggcg ctgaggagcg cggtgcggtg cgcagcccgc cttcccgaga cggccgtccg
      961 gcctcgcgcc tgactactcc ctccagcccg gacccccctg aaatatgttc aggggcgctt
     1021 ggatgtggcc cgggaaagac gccgccgcgc tgactatctg ctgctgctgc tgctgctggg
     1081 ctcccaggca gagcgacaaa ccttgcgccg attcggagcg ggcgcagcga tggcgactgt
     1141 ccctggcgtc cctgctcttc ttcaccgtgc tgctcactga ccatctgtgg ctgtgcgcgg
     1201 gggcccggcc ccgggccagg gagctgagca gcgccatgcg gccaccctgg ggggccggcc
     1261 gcgagcggca gccggtgcct cgtcgcgcgg tgttgccact gccaccgccg tcgcccggcg
     1321 agcccagcgc gtcctcgggc acctgcggcc cgcgatacag caacctgacc aaagccgccc
     1381 ctgcagccgg ctccgggccg gtctgcgacg gcgtcccaga gcccaccggg ctggacgcag
     1441 cttgcaccaa attggaatct ttgcagagac tttttgaacc gaccaccccg gctccccctc
     1501 tgcggccccc tgactcccct tcccgtgccc cggagttccc ctccgccaaa aaaaacttgc
     1561 tcaaaggcca ctttcggaac ttcactctct ccttttgtga cacctacaca gtctgggact
     1621 tgctgcttgg catggaccgc cccgacagcc tggactgcag tctggacacc ctgctggggg
     1681 atctactggc tgtagtggcc agcccgggct ccgggacctg ggaggcatgt agcaattgca
     1741 tagaggcata ccagcgactg gaccgacatg ctcaggaaaa atatgacgag ttcgacctcg
     1801 tgctgcataa atacttacag gcagaagagt actctatccg gtcctgcacg aaaggctgca
     1861 aggctgtcta caaggcctgg ctgtgctcag aatacttcag tgtgacccag caggaatgcg
     1921 agcactgggt gccctgcaag caatactgct tggaggtgca gacccggtgc cccttcatcc
     1981 tccctgacaa tgaagaaatg gtgtacggag gcctccctgg ttttatctgc acaggattga
     2041 tcgatacttc accaaagcgg ccggaaacca agtgctgtga cgtgcagtgg gtctcttgtg
     2101 agtcggagaa gaagaagttc aaggactctg agccccctaa aacccaccac cagcaattcc
     2161 accactccta ttttcaccac taccaccaac agtaccacca ctaccatccc cgccatgaac
     2221 ccccaagccg tgtcagcaac aagccctccc tgctgccggt ctctgggggc tcccgcctca
     2281 gccccagcag gatccggctc tgtgtccttg ttcttatgct cctccatacc gtagtgtcct
     2341 tctccagcag ccagggtggt gggggactgg ggctggagac actgcctgcc ctagaggagg
     2401 ggctgaccca ggaagagtga caacagggag ggaggacaaa cctccaccac atactgacat
     2461 cagccccagc cctgttctag gctgggggaa ggaagcacct cccacaggag gtgtagtatc
     2521 aggtgggggt ggggggagaa gtgggggacc agatattgtc cccaatccac ccctgcccta
     2581 aaagcagctc caacaaaatg gccagagggc ccccaaggag ctgtaaaact cacccaggag
     2641 aaaaaggtag gagcagtagg tgtcccctca caagccccac ctatggggct tagttataaa
     2701 aaggggggag gggctggagt tgcccactcc tgccaagagc cctgacccca gggaaggagg
     2761 ctgcttaccc agcctcagcc ctacagggaa tgttgggggg cacagagggg agtagttctc
     2821 ccccctccac attccttccg ttgccaagat ccttaattcc ctcctgccca tatccctaca
     2881 ggtgacggca gacagtgtgg ttgccctcct gccacttcag cgcaccctga gtgtggagct
     2941 gtcacaggat gaggcacaca gtgtgacagc taggaaggtg ccccagttag gctgcccccc
     3001 cgccacccta ggcaatgagg gattgcaact ggatatggaa tgagtggtaa aagagaagaa
     3061 agatagggaa gggaagaaga aaggggagag gtggacagaa agccccaaga gatggctata
     3121 ctgacgatac ctggcctttg ggaggtgggt gattagtatt gaggcaggtt caagagcggc
     3181 ctccaaaatc agaaggaggt gcataaagag atccctgggg aaagagtcca gaaggttgag
     3241 ggcaaatggt tggactgccg ctgtctggag ggccatatct tacagaaggt gcacacactc
     3301 cctagggctg ctgttgccct ggaaatcttg gccttgtggc cacagacctt tcattaccaa
     3361 tctccacagg gaggagggac ttgagcccaa gtgtgtcagg cctggcctgg gtccctacac
     3421 tccctcatct tgtcctagct caggcctcca tgaaggagaa ctggtggtgt tgccccagag
     3481 ctctccagag atgagcctcc cctaccctgt cctgtgtcca tccccagcct accaaagagt
     3541 attcatccct tcccatccct gaccttgtgg cctattgtcc cactgaggga cagctagact
     3601 tctcctcacc ctttagcagg tccctttctc tagccacccc ttgcccttgc tggacaaagt
     3661 tcagagactg gcaagaggac tctgactgga gatgaagtgc tgctgctaac ccttgcctga
     3721 ggaactcgtg taattaagct agagggatga gtgagagatg aggcttggga gcctttggcc
     3781 ttgcttgcac ggacctgctg aaagaaaagg aaggacacat tgccttggca tctaaaagcc
     3841 aatgaaagct gacaagaaca gaaaccagat tctttgtggg acaggccaaa agctttcaga
     3901 gaccaaaagg atgcatacgg gaggacagtc ctggagcaat gttacagaga aacaggaggg
     3961 aggggaggag gagctgcacc ttgccagctt tgtgatggat agaagccctc cctagcagac
     4021 aagggttcct tcatccaggg gccactgttg gatcccaaat cagcttcttg agcctatgga
     4081 gcccttttct ctgccagttt actcatatct cacagcctgt cctctgcctg gaccctgtgt
     4141 cctccatctt ttggccctca gcacttcggg cctggccact accccatccc tagagtgctc
     4201 tttttcagct ggggagggta agaggtgctg gatccttccc agatgtgctt atgtataagt
     4261 gaaaggcagg ggcttgggct ccaaagagat cccagtactg ccttctaact cctgcattct
     4321 caggagggga taaaggactg ggaagcaaag ggggacaata tggtcccagg gaatggaccc
     4381 ttggagactc ccatcctctc ttccccctca ccaagtgccc aggagacccc tggctcagac
     4441 cagcccaagg ccttgcccag tggcagggga aaggggcacc acactccacc tcacagtcat
     4501 ttgactgtcc ccattgaccc aacccccgat cttcctccac ctccccagct gcccctgccc
     4561 tccgtcacag gcagcagagg tgggcagctt tcttatgcca ttttctacac tgtgcttcat
     4621 gagtaggact ttcttgcact cgttcctatg actgagtctc caagctggtc ccctagtagt
     4681 ctcccatcct tccctccttt ccccagctac ggttcagttg tctctgcctt ctcctttacc
     4741 tgcctccgtg tttcagtgag agtgtccgta tgtgtactgc tttctgtttt gttgcattgt
     4801 ggagcagagg cctctctgct cgtgtttaac cccttaaaga aataaatggt aagacttga
//
