LOCUS       NM_001402488            3288 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus NALCN channel auxiliary factor 1 (Nalf1),
            transcript variant 1, mRNA.
ACCESSION   NM_001402488 XM_573950
VERSION     NM_001402488.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Mar 15, 2022 this sequence version replaced XM_573950.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.4726.1, DV714381.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760433
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1089              JAXUCZ010000016.1  86415540-86416628
            1090-1261           JAXUCZ010000016.1  86911439-86911610
            1262-3288           JAXUCZ010000016.1  86936124-86938150
FEATURES             Location/Qualifiers
     source          1..3288
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..3288
                     /gene="Nalf1"
                     /gene_synonym="Fam155a; RGD1559498; Tmem28"
                     /note="NALCN channel auxiliary factor 1"
                     /db_xref="GeneID:498667"
                     /db_xref="RGD:1559498"
     exon            1..1089
                     /gene="Nalf1"
                     /gene_synonym="Fam155a; RGD1559498; Tmem28"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..1551
                     /gene="Nalf1"
                     /gene_synonym="Fam155a; RGD1559498; Tmem28"
                     /note="isoform 1 is encoded by transcript variant 1;
                     transmembrane protein 28; transmembrane protein FAM155A;
                     transmembrane protein FAM155A-like; family with sequence
                     similarity 155, member A"
                     /codon_start=1
                     /product="NALCN channel auxiliary factor 1 isoform 1"
                     /protein_id="NP_001389417.1"
                     /db_xref="GeneID:498667"
                     /db_xref="RGD:1559498"
                     /translation="MTRGAWMCRQYDDGLKIWLAAPRENEKPFIDSERAQKWRLSLAS
                     LLFFTVLLSDHLWFCAEAKLTRTRDKEHHQQQQQQQQQQQQQQQQQQQQQQRQQQRQR
                     QQQRQRQQEPSWPALLASMGESSPAAQAHRLLSASSSPTLPPSPGGGGGSKGNRGKNN
                     RSRALFLGNSAKPVWRLETCYPQGASSGQCFTVESADAVCARNWSRGAAAGEEQSSRG
                     SRPTPLWNLSDFYLSFCNSYTLWELFSGLSSPSTLNCSLDVVLTEGGEMTTCRQCIEA
                     YQDYDHHAQEKYEEFESVLHKYLQSDEYSVKSCPEDCKIVYKAWLCSQYFEVTQFNCR
                     KTIPCKQYCLEVQTRCPFILPDNDEVIYGGLSSFICTGLYETFLTNDEPECCDIRSEE
                     QSTPRPKGTVDRRDSCPRTSLTVSSATRLCPGRLKLCVLVLILLHTVLTASAAQNSTG
                     LGLGGLPTLEDNSTRED"
     exon            1090..1261
                     /gene="Nalf1"
                     /gene_synonym="Fam155a; RGD1559498; Tmem28"
                     /inference="alignment:Splign:2.1.0"
     exon            1262..3288
                     /gene="Nalf1"
                     /gene_synonym="Fam155a; RGD1559498; Tmem28"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agagagagag agagagagag agagagagag agaagaaacg ggaggagggg atacggaaat
       61 taaacccttt aagtcaatgc atattgtggt gacaccggca caggagccct cacggtggag
      121 tcggccaggg ctgtgcgttc ccaaaatatg accaggggtg cttggatgtg tcggcagtat
      181 gacgacggct taaaaatctg gttggcagca ccccgggaga acgagaaacc gttcatcgat
      241 tcagagcggg ctcagaaatg gcgactgtct ctggcttctc tcttgttttt cacagtcctg
      301 ctctctgatc acttgtggtt ctgcgccgag gccaagctga cccggacccg ggacaaagag
      361 catcaccaac agcagcagca acagcagcaa cagcagcagc agcagcagca acagcagcag
      421 caacagcagc agcgacagca gcagcggcag cgacagcagc agaggcagcg acagcaggag
      481 ccctcctggc ccgcgctcct ggccagcatg ggggagtcct cgcccgccgc ccaggcacac
      541 agactcctct ccgcctcctc gtcccccacc ctgcccccct ccccgggagg cggcggcggc
      601 agcaagggca accgaggcaa gaacaaccga agcagggctc tttttctagg aaactctgcc
      661 aagccggtgt ggcgcctaga gacttgttac ccccagggcg cctcctccgg ccagtgcttc
      721 acggtggaga gcgcggacgc tgtgtgcgcc aggaactgga gtcggggggc ggccgcgggg
      781 gaggagcagt cgtccagggg ctcgcggcca actccgttgt ggaacttgtc ggatttttac
      841 ctttcgtttt gtaattccta cacactttgg gagttgttct cggggctgtc cagccccagt
      901 actttgaact gcagtctgga cgtggtgctc acggagggcg gtgagatgac cacgtgtaga
      961 cagtgcatcg aggcttacca ggactacgac caccacgctc aggagaagta cgaagagttt
     1021 gaaagcgtgc tgcataagta cttacagtcg gatgagtact cggtgaagtc ctgtcctgag
     1081 gactgcaaga ttgtctacaa agcctggctc tgctcccagt attttgaagt cacacagttt
     1141 aactgcagaa agaccattcc ttgcaagcaa tattgtttgg aggtgcagac gaggtgtccg
     1201 ttcatattgc ccgacaatga cgaagtcatt tacggaggcc tctccagctt catctgcaca
     1261 gggctctacg aaaccttcct aaccaatgat gaacccgaat gctgtgacat caggagcgag
     1321 gagcaatcca cacccagacc caaagggacc gtggacagaa gagactcctg tcctaggacg
     1381 tcgctcacag tgtcctcggc cacgagactg tgccctggca ggctgaagct gtgtgtactc
     1441 gtcctcatcc tcctccacac agtgctcacg gcctctgcgg cacagaactc cacggggctg
     1501 ggcctgggcg gcctccccac gctcgaggac aactccaccc gagaggactg agcgcagcca
     1561 ggggcatgcg cacagcgcgg gactgggtag gggcaggggc aggcgcgtgc acagagcagc
     1621 agcgacccac ccgggatgct cacctgctgc agcccgggga ctgaacccac ccgggtgctc
     1681 tacccttgga cttcccgcaa ggcctgtggg taatatttaa caagatgggc ccgatcccca
     1741 acatggacac agtcgcagct ttttaccaac taaaaggctg caagtgactc aatttctcac
     1801 accattttat acactgtgtt ttaatgtttg gaggttttct ttgctttcag ttcggtttgg
     1861 gtttattttc cgtttttatt ttaatttaat ttaagtttgt tttattttct gcacttgtta
     1921 atgcagggtt tctttggggg taaactaagt ctctccactg tctatctatc gatttctagt
     1981 catcgtgtgt ccatcagata attctgtcta tgtcctgtca gtttctaata gaggaatgac
     2041 cgctataacc tcatggtgta gcaaaaaaaa aaaacatcaa aaaaagaata aaaaaacaca
     2101 acaaaaaaag acaaaaaaag gaaaacaaca aaaattaaaa aaaaaatccc taagcctcct
     2161 tccaacccat ggacgccacg ccctgcaggc cctgctggcc ctcgccttct tctgtcccta
     2221 agcagacaac atccgcttgc ttctgtctgt gtctcgcatg gtgggtgtgt attctgcaca
     2281 agccggagca gagagagcca ggggcctagc agttcctctg ggtgatccaa cggtgtgctc
     2341 agagtcaggc agttcagagt tttatgtggg aaacacacat atacaccaca cataatagaa
     2401 gagtgaagca cgcccccgtg gacaagtcgc tccggtgccc atcccgggtt ctttcttcct
     2461 ggccaggcag acaggagcgg cccatggcct actgcccgcg agatgtgggc aagcagaccc
     2521 tcttcaacat caggcgcttg cctcgaggga tgagagcaga gaccaagaac gcaaatccag
     2581 acttctgttc ttcccctctc atggtggaag ggctcctagt atacagaata tgtaccattt
     2641 taactcagtg ttgcccccag catagggttc cagattcttt caggtgtaaa atgtatacag
     2701 ctctgcgtta tcacagagga gaatcttttc aaagcaatca acagatcagc catttttacc
     2761 acagtgcgaa gaagcgtcct tactccagcg agctctaggt ggctgagaaa aagaagtcta
     2821 atcactgttc gtattttttt tcctttgtgg gaacatttca cctgctgagt gtgtatgaat
     2881 ttgctttcta aaaaggcttt tatgggttta cagtagggcc agtggaaggg agagttaata
     2941 agggctgttt ttacaaaaca aacaaacgaa actaataatt ttaaaaagac acttcacatt
     3001 ccttcctgtt ctctaactac acgtgggaag tgcacttccg gtgggtttgc tgtgtgggtg
     3061 agagatgaag gaaatccatg gacaaggtcc tcttagtgaa caaaatttag ttgttaactt
     3121 tatagctata aaattccccc cgggtgtttg ttttcgttca gacagatcta acctctgcat
     3181 catgcttaac cctgcgacat gcgtacagta tgcatatttt gttttgaata aaatgttttg
     3241 ttccagtctg ttaagaatat taaataataa aggtattgct taataaaa
//
