LOCUS       XM_008760697            5864 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NLR family, apoptosis inhibitory
            protein 6 (Naip6), transcript variant X5, mRNA.
ACCESSION   XM_008760697
VERSION     XM_008760697.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008760697.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008760697.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5864
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..5864
                     /gene="Naip6"
                     /gene_synonym="Birc1; Birc1a; Birc1b; Naip; Naip2"
                     /note="NLR family, apoptosis inhibitory protein 6; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 59 ESTs, 35 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 13 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:191568"
                     /db_xref="RGD:621281"
     CDS             827..5038
                     /gene="Naip6"
                     /gene_synonym="Birc1; Birc1a; Birc1b; Naip; Naip2"
                     /codon_start=1
                     /product="NLR family, apoptosis inhibitory protein 6
                     isoform X1"
                     /protein_id="XP_008758919.1"
                     /db_xref="GeneID:191568"
                     /db_xref="RGD:621281"
                     /translation="MAAQGEAFEERICEFDDDLVSEFSTLLRVDALQVLKRQQEEDHK
                     TRMKMKKGFNAQMRSEAKRLKTFVTYDTFRSWTPQEMAAAGFYYTGVRHGVQCFCCSL
                     ILFATRLRKVPIEVHRKLQPECEFLSGKDVGNIGKYDIRVKSPETLPRGGRARYHEEE
                     ARLESFEDWPFYAHGTSPRVLSAAGFVFTGKRDTVQCFSCGGCLGNWEEGDDPWKEHA
                     KWFPKCEFLQSKKSAEEIAKYIQTYEGFLHVTGEHFVNSWVRRELPVVSAYSNDSVFA
                     NEGLRMDTFKDWPHESPMAVEALVKAGLFYTGKKDIVQCFSCGGCMENWKEGDDPIED
                     HTKFFPNCVFLQTLKSSAEVIPALQSHCARPEAMETTSESNHEDGVAVHSSVADLGQS
                     EAQWCQEARSLSEQLRGTYTKASFRHMNLPEAYSSLGTDHLLGCEVFLISKHVSRPVQ
                     VALTIPEVFANLSSVMCVEGEAGSGKTTFLKRIAFLWASGCCPLLNRFQLVFYLSLRS
                     IRADQGLADIICAQLLEAGGCISEVSLSSGIQHLQHQVLFLLDDYSGMDSLPQALDTL
                     ITKNYLSRTCLLMAVHTNRVRDIRPYLETVLQIKEFPFYNTVYILKKIFSHDIIRVRR
                     FINYFGFHEYLQGIHKTPLFVAGVCADWLQNPSDQPFQDVTIFKSYMQYLFLKHKATA
                     GPLQATVSSCGHLALTGLFSSSFEFSSDDLIEAGVDEDEELSTCLMSKFTAQRLRPVY
                     RFLSPLFQEFLAAMRLSELLGSDSQEDQDLGLYYLRQINSPLKAMSIYHTFLRYVSNH
                     PSSKAGPKVISHLLQLVDEKESPENTSENEDYMKLHPETLLWSQCLRGLLQLSPESFS
                     LFISERLLNIALNFAYQSNTVAACSPVILQFLQGRTLDLKVLNLQYFWDHPETLLLLK
                     SIQVLFNGNNRVQRIDFSLMDKSFEKIQPPTIDQDYAFAFQPMSECQRNLAEKENIIK
                     NYDDMKYQDPLNISSGYWKLSPKPYKIPRLEVGVNNMGPADQALLHVLMEVFSASQSI
                     EFHLFNSSGFLESIRPALELNKTSVTKCSMSRLELSRAEQELLLTLPALQSLEVSGTS
                     QIPDQLFHNLDKFLGLKELSVRLDGTQDMLSVLPGEFPNLHHMEKLSIHTSTESDLSK
                     LVKLIQNSPNLHDFHLKCDFLSNCESLMAALASCKKLREIEFSGRCFEAVPFVNILSN
                     FASLKILNLRNQQFPDKETSEKFAQALGSLRNLEELHLPTGDGIHQVAKPIVRRCLQL
                     PCLRVLVFAETLDDDSVLEIAKGATSGGFQNLENLDLTLNHKITEEGYRNFFQALDNL
                     PNLQNLDISRHIPECIQVQASTVKALGQCVSRLPSLTRLGMLSWLLDEEDMKVINDVK
                     ERHPQSKRLTVHWRWVVPFSPVIQK"
ORIGIN      
        1 tgttaaagaa tacttagcaa ctgtgtagac tgcattcctg aaccttgttt gaggcaacag
       61 gaaagccatg ccacttacgg ctcagcgctc aattgtggga cttctggctg ggtgttttcc
      121 acagagatct cggccctggg tgtctgtgag gggctgcagt tacgtgaacc cttgatctcc
      181 tgggaggctg ggaatgcgcc tgccatccct tttagggtct ctggagattc gacctatctt
      241 ggccaggaat caagatcata gctcctggac aggtgcacat gcatgcaact caacaggaac
      301 agaaagtggg tcgacaaaac cgcatgctag agtggtttct actccagggt gtatgaccta
      361 cctccccagc catgaactgt gcatgaggat tacaaaacca ggaaattccc ttccatagat
      421 tggcctcaaa tctggtttcc tgctcctgtc aagccttctg tgccaccatg aaatacagat
      481 cttcaaactg gtagaatggg ctacatgcaa gatgctaaaa taagtactca atcaggataa
      541 aggacacttg caagatttca tggatggatt caggaccctg tgactcactg ccaggccttg
      601 aggcccagct cactgcttga cacacagtga atgtcagagg tcgatataca agattatttg
      661 tctccaacct accctgaaag acctgggcaa caaactgaag acatcaggct tggggcaagc
      721 ctctttacac actgagccat ctttctggcc tgagacacag ttctttacat ataataacaa
      781 aaacactaca aacaccagcc ctctgctttc ctttctcatt tagaaaatgg cagcccaggg
      841 agaagccttt gaggagagaa tttgtgagtt tgatgatgac ttggtctctg agttctctac
      901 tcttctccga gtggatgcac ttcaagtctt aaagagacaa caagaagaag accataaaac
      961 acgaatgaaa atgaagaaag gttttaatgc acagatgcgc agtgaagcca aacggctgaa
     1021 gacttttgtg acctatgaca cattcagatc atggacccca caggagatgg cagctgctgg
     1081 gttttactac acgggtgtga gacatggggt tcagtgcttc tgctgtagct taatcctttt
     1141 tgccaccaga ctcaggaaag ttcccataga agttcaccgg aaattacaac cagaatgtga
     1201 gttcctctcg ggcaaagatg ttggaaacat tggcaagtac gacatacggg tgaagagtcc
     1261 agagacgctg ccgagaggtg gcagagcaag gtaccatgag gaggaggcca gactggagtc
     1321 ctttgaggac tggccgtttt atgcccatgg gacatcacct cgtgtactct cagctgctgg
     1381 ctttgtcttc acaggtaaaa gggacactgt gcagtgtttc tcctgtggcg gatgcttggg
     1441 aaactgggaa gaaggagatg atccctggaa ggagcatgcc aagtggttcc ccaaatgtga
     1501 atttcttcaa agcaagaagt ccgcagagga aattgccaag tacatacaaa cctacgaggg
     1561 atttcttcat gtaacgggag aacattttgt gaattcctgg gtcagaagag aattacctgt
     1621 agtatcagct tacagcaatg acagtgtctt tgctaatgaa ggactaagaa tggacacgtt
     1681 taaggactgg ccccacgaat cacctatggc tgttgaagct ctggtcaaag caggtctttt
     1741 ctacacaggc aaaaaggaca tcgtccagtg tttctcctgt ggaggatgca tggagaattg
     1801 gaaggaaggt gatgacccaa tagaagatca caccaagttt tttcccaact gtgtatttct
     1861 tcaaaccctg aagtcctctg cagaagtgat tccagccctt cagagccact gtgcacgtcc
     1921 agaagccatg gaaaccacaa gtgaaagcaa ccatgaggat ggagtggcag ttcattcttc
     1981 tgtagcggac ttgggtcaga gtgaagccca gtggtgtcaa gaggccagga gtctgagtga
     2041 gcagctgaga ggcacctaca ccaaagccag tttccgacac atgaacctgc ccgaggcgta
     2101 ttccagcctc ggcactgacc acttgctcgg ctgcgaggtg ttcctcattt caaagcacgt
     2161 cagccggcca gtgcaagtgg ccctgacaat ccccgaggtc ttcgccaatc ttagctctgt
     2221 catgtgtgtg gagggggaag ctggcagtgg gaagaccacc ttcctgaaga ggatagcttt
     2281 cctctgggca tcaggatgct gtcccctgtt gaacaggttc cagctggtct tctacctctc
     2341 ccttcgttcc atcagagcag accagggact ggccgacatc atctgtgccc agctcctaga
     2401 ggcaggagga tgcatcagtg aagtgagcct gagcagcggc atccagcact tacaacacca
     2461 ggtcctgttt ctgttggatg actacagtgg gatggactcc ctcccccaag ccctagacac
     2521 actgattacc aaaaactact tgtcacggac ctgcttactg atggccgtcc ataccaacag
     2581 ggtcagggac atccgcccat atctagagac agttctacag atcaaagagt ttccctttta
     2641 taatactgtc tatatattaa agaagatctt ctcacatgac ataattcgtg tgcgaagatt
     2701 tataaattac tttggatttc atgaatattt acagggaatt cacaaaaccc ccctctttgt
     2761 ggcaggagta tgcgctgact ggcttcaaaa tccatctgac cagccctttc aggatgtgac
     2821 cattttcaag tcctacatgc aatacctgtt cttaaagcac aaagctacag ccgggcctct
     2881 ccaggccacc gtgtcctcct gtgggcatct ggccttgaca gggcttttct catcgagctt
     2941 tgagttcagt agtgatgacc tcatagaggc aggagttgat gaagacgaag agctcagcac
     3001 ctgcttgatg agcaaattca ccgcccagag gctgagacca gtctaccggt ttttaagtcc
     3061 tctgttccaa gagtttcttg ctgccatgag gctctcagaa ctcctggggt cagatagtca
     3121 agaagaccaa gatctgggac tgtattattt gagacaaatt aactcacctc tgaaggccat
     3181 gagcatctac cacacttttt tgaggtatgt ctccaaccac ccttcatcaa aggcagggcc
     3241 aaaagttata tctcatttgc ttcagttggt ggatgagaaa gagtccccgg agaacacgtc
     3301 tgaaaatgag gattacatga agctccatcc agaaactttg ctgtggagtc agtgtcttag
     3361 agggctgttg cagctgtctc ctgaatcttt ctctttgttc atttcagaac gtttactgaa
     3421 cattgcccta aactttgctt atcaaagcaa cacagttgct gcatgctctc cagttatttt
     3481 gcagttcctt caagggagga cactggattt gaaagtactg aatttacagt acttttggga
     3541 ccacccagaa accctgttac tattgaagag tattcaggtc ttatttaatg ggaataacag
     3601 ggtacagaga attgattttt ctctcatgga caaatctttt gaaaaaatac agccaccaac
     3661 tatagatcag gactatgcct ttgcctttca acctatgagt gaatgccaga gaaatttagc
     3721 tgaaaaggaa aacataataa agaactatga tgatatgaaa tatcaggatc cactaaatat
     3781 tagtagtggc tattggaaac tgtcccccaa gccttacaag atccctaggc tggaagttgg
     3841 agtgaacaac atgggtccgg cagaccaggc tctgctccat gtcctaatgg aagtcttctc
     3901 agcctcacag agtattgagt tccatttatt caacagcagt ggctttcttg aaagcatccg
     3961 cccagctctg gagctgaata agacctctgt caccaagtgt tccatgtcca ggctggagct
     4021 cagcagagca gaacaggagc tgcttctcac cctgcctgcc ctgcagtctc ttgaggtctc
     4081 aggaacaagc cagattccag atcagctctt ccataacttg gacaagttcc tgggcctgaa
     4141 agaactgtct gtgagactag atggcacaca ggacatgctc tcagtccttc cgggagagtt
     4201 cccaaacctc catcacatgg agaagttatc catccacacc tccacggagt ctgacctctc
     4261 caaactagtt aaattgattc agaactctcc aaatctgcat gatttccacc tgaaatgtga
     4321 tttcctttcg aattgtgagt ctctcatggc tgcgcttgct tcctgcaaga aactcagaga
     4381 gattgagttt tctgggcgat gctttgaagc cgtgcccttt gtcaacattt tgtcaaattt
     4441 tgcttctttg aagatattga atcttagaaa ccaacaattc ccagataagg aaacatcaga
     4501 aaagtttgcc caggctctgg gttctctcag gaacctggag gaactgcacc ttcccactgg
     4561 ggatgggatc caccaagtgg ccaaaccgat tgtccggcgg tgtctgcagc ttccctgtct
     4621 ccgagttctc gtctttgcag agacattgga tgatgacagt gtgctggaaa ttgccaaggg
     4681 agcaaccagt ggaggcttcc aaaatctgga gaacttagac ctcacactga atcacaagat
     4741 tactgaggaa ggctacagga atttctttca agccctggac aacctgccaa acctgcaaaa
     4801 tctggacatc tccaggcata tcccagaatg catccaagtt caggccagca ccgtcaaggc
     4861 tctgggtcag tgtgtgtccc gactgcccag cctcaccagg ctggggatgc tcagttggct
     4921 gctggatgaa gaggacatga aagtgattaa tgacgtgaag gaaagacacc ctcagtccaa
     4981 acgcctgact gtgcactgga ggtgggtggt gccgttctct cctgtcattc agaagtgaag
     5041 gatgcagggg cagcctactg gcaggtctaa aaccctgttt tcaaatacat ttcactctag
     5101 acaggcatgg cgtaatccta gtacttagac tgagcaggag ggtcaagagt ttgggtccag
     5161 cctgggctat gtgacaatac tttagacccc aatcaaaacc aaatcgttta ctattcatat
     5221 acaaaatatt cttgaactgt atcaggctgg taactatttg aggcctgcac gcctacacca
     5281 agctatgatg ccttggcagt cctcgtatgg tccctcttgt acaaagacta gagcttcagg
     5341 caagttcaca cagagaaccc tccattatcc agatcaatag aagggggctg tggaaagaaa
     5401 cattgatcta tgtcaagact acattgtgga aggaatgatc cacataagta agaaacggcc
     5461 agtttaagga ttgaatcagt tccacatctg atgagacggg agttgacttc accacaggat
     5521 gcagcgaact ctctccggga ggtgatcttt ggtttttgta agacttctgt gtgttcacca
     5581 gtcttggtgt ggccatgttt gtttacaccg tctcttacct atttgaaaac atgggcttag
     5641 agaaaactgc ctttgttcca ggggctttgg ggagttattt ttgttaggat agctttataa
     5701 ttttgttgga aacccagtct gttcagggta tatgatttaa tcttgtaagg atttctgggt
     5761 atattaactt gggtgtgaga attgtcattt cataactgtc acctctctag aagcaggggg
     5821 acctgggaga atggagccaa taaatgcagt ggacgaaagt ctca
//
