LOCUS       XM_226743               6027 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NLR family, apoptosis inhibitory
            protein 5 (Naip5), transcript variant X1, mRNA.
ACCESSION   XM_226743
VERSION     XM_226743.8
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_226743.9.
            
            On Jan 21, 2021 this sequence version replaced XM_226743.7.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6027
                     /gene="Naip5"
                     /note="NLR family, apoptosis inhibitory protein 5; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 1 EST, 37 Proteins, and 97% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     47 samples with support for all annotated introns"
                     /db_xref="GeneID:294691"
                     /db_xref="RGD:1559914"
     CDS             234..4442
                     /gene="Naip5"
                     /codon_start=1
                     /product="baculoviral IAP repeat-containing protein 1e
                     isoform X1"
                     /protein_id="XP_226743.4"
                     /db_xref="GeneID:294691"
                     /db_xref="RGD:1559914"
                     /translation="MAEHGEASEDQVSEFDGECLPELSALLGVDAVQLVKSQEEEENK
                     ERMKMKKGFNAQMRSEAKRLKTFVTYDAFKSWTPQEMAAAGFYYTGVRHGVQCFCCSL
                     ILFGTSLRKVPIESHRKLRPQCEFLSGKDVGNIGKYDIRVKNPETLPRGGRARYHEEE
                     ARLESFEDWPFYAHGTSPRVLSAAGFVFTGKRDTVQCFSCGGCLGNWEEGDDPWKEHA
                     KWFPKCEFLQSKKSTEEINQYIQSYTGFLHVAGEHFVNSWVRRELPVVSAYSNDSVFA
                     NEGLRMDTFKDWPHESSVAVEALVKAGLFYTGKKDIVQCFSCGGCMENWKEGDDPIED
                     HTKFFPNCVFLQTLKSSAEVIPALQSHCACPEAMETTSESNHEDPVAVHSSVAGLGQS
                     EAQWCQEARSLSEQLRGTYTKASFRHMNLPEAYSSLGTDHLLGCEVFLISKHVSRPVQ
                     VALTIPEVFANLSSVMCVEGEAGSGKTTFLKRIAFLWASGCCPLLNRFQLVFYLSLRS
                     IRADQGLADIICAQLLEAGGCISEVSLSSGIQHLQHQVLFLLDDYSGMDSLPQALDTL
                     ITKNYLSRTCLLMAVHTNRVRDIRPYLETVLQIKEFPFYNTISVLRKFFSHNTTRLLE
                     FMVYFGRNEDLQGVHKTPLFVAAVCTDWFQNPSDQPFQDVTIFKSYMQYLFLKHKATA
                     GPLQATVSSCGHLALTGLFSSSFEFSSDDLIEAGVDEDEELSTCLMSKFTAQRLRPVY
                     RFLSPLFQEFLAAMRLSELLGSDSQEDQDLGLYYLRQINSPLKAINSYGIFLKYVSDH
                     CSSKAGPKVVSHLLQLVDEKESLENMSENEDYMKLHPETFLWLHFLRGLWLNSPESFS
                     SLLSERLLNIALNFAYQSSTVAACSPVILQFLRGRTLALGVLNSQYFWDHPESLLLLG
                     SLKVSINGNEISSHVDYSFKTYFENLQPPAIDKEYTSAFEHISEWKRNFAEDEKIIKH
                     YQNIWPRVLPDISEGYWKLSPKPYKIPRLEVGVNNMGPADQALLHVLMEVFSASQSIE
                     FQLFNSSGFLESIRPALELNKTSVTKCSMSRLELSRAEQELLLTLPALQSLEVSETNQ
                     IPDQLFHNLDKFLGLKELSVRLDGTQDVLSVLPGEFPNLHHMEKLSIHTFTESDLSKL
                     VKLIQNSPNLHDIHLKCDFLSNCESLMAALASCEKLREIEFSGRCFEAMPFVTLLPNF
                     VFLKILNLKGQQFPDKETSEMFAQALGSLRKLEELHLPKGDGIHQVAKLIVQQCLQLP
                     CLRVLAFHHVLDDDSVTEVARVATSRGFQKLENLDLSMNHKITEEGYRNFFQALDNLP
                     NLQELNICRHIRECIQVQASTVKALGQCVSRLPSLTRLRMLSWLLDEEDMKVINDVKE
                     RHPQSKRLTVFWKWIVPFSPVVQE"
ORIGIN      
        1 gcagttggtg gaacctttaa gaggcagagc ctcatcaagg aagtgagtac ttagatatag
       61 cctcatgggt atttatagcc tggcccaact tcttcctttc ttttcctcac tgaggatgca
      121 atgtgaccag taggctctgc tccttctacc acagcttcct gccacgacgg aactcatccc
      181 ttcaaattga aaccacctga ggaagaagca ggagcctgac tgaactgaag aaaatggctg
      241 agcatgggga ggcctctgag gatcaagttt ctgagtttga tggtgaatgt ctccctgagc
      301 tctctgctct tctcggggtg gatgcagttc agctggtaaa gagccaagaa gaagaagaga
      361 ataaagaacg gatgaaaatg aagaaaggtt ttaatgcaca gatgcgcagt gaagccaaac
      421 ggctgaagac ttttgtgacc tatgatgcgt tcaaatcgtg gaccccacag gagatggcag
      481 ctgctgggtt ttactacacg ggtgtgagac atggggttca gtgcttctgc tgtagcttaa
      541 tcctctttgg tactagcctc aggaaagttc ccatagagag ccacaggaaa ttacgacccc
      601 aatgtgagtt cctctcgggc aaagatgttg gaaacattgg caagtacgac atacgggtga
      661 agaatccaga gacgctgccg agaggtggca gagcaaggta ccatgaggag gaggccagac
      721 tggagtcctt tgaggactgg ccgttttatg cccatgggac atcacctcgt gtactctcag
      781 ctgctggctt tgtcttcaca ggtaaaaggg acactgtgca gtgtttctcc tgtggtggat
      841 gcttgggaaa ctgggaagaa ggagatgatc cctggaagga gcatgccaag tggttcccca
      901 aatgtgaatt tcttcaaagt aagaaatcca cagaggaaat taaccagtat attcaaagct
      961 acacgggatt tcttcatgta gcgggagaac attttgtgaa ttcctgggtg agaagagaat
     1021 tacctgtggt atcagcttac agcaatgaca gtgtctttgc taatgaagga ctaagaatgg
     1081 acacgtttaa ggactggccc catgaatcat ctgtggctgt tgaagctctg gtcaaagcag
     1141 gtcttttcta cacaggcaaa aaggacatcg tccagtgttt ctcctgtgga ggatgcatgg
     1201 agaattggaa ggaaggtgat gacccaatag aagatcacac caagtttttt cccaactgtg
     1261 tatttcttca aaccctgaag tcctctgcag aagtgattcc agcccttcag agccactgtg
     1321 catgtccaga agccatggaa accacaagtg aaagcaacca tgaggatcca gtagcagtgc
     1381 attcttctgt ggcaggcttg ggtcagagtg aagcccagtg gtgtcaagag gccaggagtc
     1441 tgagtgagca gctgagaggc acctacacca aagccagttt ccgccacatg aacctgcccg
     1501 aggcgtattc cagcctcggc actgaccact tgctcggctg cgaggtgttc ctcatttcaa
     1561 agcacgtcag ccggccagtg caagtggccc tgacaatccc cgaggtcttc gccaatctta
     1621 gctctgtcat gtgtgtggag ggggaagctg gcagtgggaa gaccaccttc ctgaagagga
     1681 tagctttcct ctgggcatca ggatgctgtc ccctgttgaa caggttccag ctggtcttct
     1741 acctctccct tcgttccatc agagcagacc agggactggc cgacatcatc tgtgcccagc
     1801 tcctagaggc aggaggatgc atcagtgaag tgagcctgag cagcggcatc cagcacttac
     1861 aacaccaggt cctgttcctg ttggatgact acagtgggat ggactccctc ccccaagccc
     1921 tagacacact gattaccaaa aactacttgt cacggacctg cttactgatg gccgtccata
     1981 ccaacagggt cagggacatc cgcccatatc tagagacagt tctacagatc aaagagtttc
     2041 ccttctataa tactatctct gtattacgta agtttttctc ccataataca acacgtctgt
     2101 tagagtttat ggtttatttt ggaaggaatg aggacttaca gggagttcac aaaacccccc
     2161 tctttgtggc agcagtatgc actgactggt ttcaaaatcc atctgaccag ccctttcagg
     2221 atgtgaccat tttcaagtcc tacatgcaat acctgttctt aaagcacaaa gctacagccg
     2281 ggcctctcca ggccaccgtg tcctcctgtg ggcatctggc cttgacaggg cttttctcat
     2341 cgagctttga gttcagtagt gatgacctca tagaggcagg agttgatgaa gacgaagagc
     2401 tcagcacctg cttgatgagc aaattcaccg cccagaggct gagaccagtc taccggtttt
     2461 taagtcctct gttccaagag tttctggctg ccatgaggct ctcagaactc ctggggtcag
     2521 atagtcaaga agaccaagat ctgggactgt attatttgag acaaattaac tcacctctga
     2581 aggctataaa ctcctatggc atatttttga agtatgtctc cgaccactgt tcctcaaagg
     2641 cagggccaaa agttgtatct catttgcttc agttggtgga tgagaaagag tccctggaga
     2701 acatgtctga aaatgaggat tacatgaagc tccacccaga aacttttctg tggttgcatt
     2761 ttcttagagg gttgtggcta aattctcctg aatctttctc ttcactcctt tcagaacgtt
     2821 tactgaacat tgccctaaac tttgcttatc aaagcagcac agttgctgca tgctctccag
     2881 ttattttgca gttccttcga gggaggacac tggctttggg agtactgaat tcacagtact
     2941 tttgggacca cccagaaagc ctgttactgt tggggagttt aaaggtttct ataaatggaa
     3001 atgaaatctc atctcatgtg gattattcat tcaagacata ttttgaaaac ttacagccac
     3061 cagctataga taaggagtac acatctgcct tcgagcacat aagtgaatgg aagagaaatt
     3121 ttgctgaaga tgagaagatc ataaagcact atcaaaatat ctggcccagg gtcctaccag
     3181 acatcagtga agggtactgg aaactgtccc ccaagcctta caagatccct aggctggaag
     3241 ttggagtgaa caacatgggt ccggcagacc aggctctgct ccatgtccta atggaagtct
     3301 tctcagcctc acagagcatt gagttccagt tattcaacag cagtggcttt cttgaaagca
     3361 tccgcccagc tctggagctg aataagacct ctgtcaccaa gtgctccatg tccaggctgg
     3421 agctcagcag agcagaacag gagctgcttc tcaccctgcc tgccctgcag tctcttgagg
     3481 tctcagagac aaaccagatt ccagatcagc tcttccataa cttggacaag ttcctgggcc
     3541 tgaaagaact gtctgtgaga ctagatggca cacaggacgt gctctcagtc cttccgggag
     3601 agttcccaaa cctccatcac atggagaagt tatccatcca caccttcaca gagtctgacc
     3661 tctccaaact agttaaattg attcagaact ctccaaatct gcatgatatc cacctgaaat
     3721 gtgatttcct ttcaaactgt gagtctctca tggctgcgct tgcttcctgt gagaaactca
     3781 gagagattga gttttctgga cgatgctttg aagccatgcc atttgtcacc ttgttgccaa
     3841 attttgtttt tctgaagata ttgaatctta aaggccaaca attcccagat aaggaaacat
     3901 cagaaatgtt tgcccaggct ctgggttctc tcaggaagct ggaggaactg caccttccca
     3961 agggggacgg gatccaccaa gtggccaaac tgattgtcca gcagtgtctg cagcttccct
     4021 gtctccgagt tctcgccttt caccacgtct tggacgatga cagtgtgact gaagttgcca
     4081 gggtggcaac tagcagaggt ttccagaaac tcgagaactt agatctttca atgaatcaca
     4141 agattactga ggaaggatac agaaatttct ttcaagccct ggacaacctg ccaaacttgc
     4201 aagagctgaa catctgcagg catatccgag aatgcatcca agttcaggcc agcaccgtca
     4261 aggctctggg tcagtgtgtg tcccgactgc ccagcctcac caggctgagg atgctcagtt
     4321 ggctgctgga tgaagaggac atgaaagtga ttaatgacgt gaaggaaaga caccctcagt
     4381 ccaaacgcct gactgtcttc tggaaatgga tagtcccgtt ctctcctgtt gtccaggagt
     4441 aaaggaagct cctgaaggct accaacagtt ccaaataccc gacttcctaa aatactttac
     4501 tttagcttag catgatgata cacacctgta ctttcagcat ttaagatact gaagtgggag
     4561 aatcacgaag ttctgaccag cctgggtcac atagcaaggt cctgtctcac agataaagac
     4621 ataactaacc atcctgttaa agaatactta gcaactgtgt agactggtaa atttcccctt
     4681 ttatatggat atatgtttct gcctgcattt atagctgtgc actacataga ccatgcatag
     4741 gttgtaaaag tgtgttgagc catcctggtc ctggagttat agatagttga gagtttcctt
     4801 tcactgccgg gcaccacacc ttcgtcctca gtaaaagcag caggtgctct aaaccctgcc
     4861 aatatcctaa ggccaataat tttttttaaa aaatctgcat gctcatcact gaacttagga
     4921 gctataatga acagtgcctt atcagtcctt gtatgcttct ccttcaagtt gatacaggga
     4981 accttcttta accttggtca acaggaaagg gctggcagaa ggaaccctga tccatggaaa
     5041 gccaaagcat ggtaggaata ttgggtggag gatatgcatg gcctgtttat agatggagtc
     5101 agtcttacac atgaggaagt gggagtgaac tttatcacag ggtgcagcct actctctcca
     5161 ggagatgctc cttggtcttc gtagagtttt gctattcatt agccttggag tggctgttga
     5221 caccgttggt attgccaaca ggaggaaggt attggactta gagaaaactg cctttgattc
     5281 ctgctttgtt tatgggactt ttgagagttt ggcatgtgct gtaacagcct tctgattttt
     5341 cttaggaatt catggtcttt ggtctatgtg gttctaactc ttcacaattg aataggaatg
     5401 gctaccacag tctcatatgt gtgaatggtt ggccattagg aagtgacatt attaggaggt
     5461 gtggccttgt tggagtaggt atgaccttgt tggaggtctt gtgtcattgg tagtggcttt
     5521 gaatttcaaa tgctaaggcc aggcccaggc tctctctctc tctctcgttc tctctctctc
     5581 tgtctctctg tctctctgtc tctctctctc tctctctctc tctctctctc tctccccccc
     5641 ccctctttct ccctttcctg ctgcctgcca ctgtagcaga tgtaaaactc tcagcctcat
     5701 gcccagcacc atgtttacct gcattcagcc atgttctcca ctgtaagaaa atgtaaaact
     5761 caaaaagctc ctaacccaaa cattcaggaa atccaggacc caatgagaag atcaaactta
     5821 aggataatag gtatagaaga gagcaaagac tcccatctta aagggccagt aaatatcttc
     5881 aataaaatta tagatgaaaa cttccctaac ctaaaaaaag agatgcccat aaacatacaa
     5941 gatgcctaca gaactccaaa tagattgaac cagaaaagaa actcctccat tcacatacta
     6001 gtcaaaacac caaatacaca aaacaaa
//
