LOCUS       XM_002727815            2478 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus N-acetyl-alpha-glucosaminidase
            (Naglu), transcript variant X1, mRNA.
ACCESSION   XM_002727815
VERSION     XM_002727815.7
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 9, 2024 this sequence was replaced by
            NM_001427043.1.
            
            On Jan 21, 2021 this sequence version replaced XM_002727815.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2478
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2478
                     /gene="Naglu"
                     /note="N-acetyl-alpha-glucosaminidase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 22 ESTs, 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     204 samples with support for all annotated introns"
                     /db_xref="GeneID:360630"
                     /db_xref="RGD:1564228"
     CDS             49..2268
                     /gene="Naglu"
                     /codon_start=1
                     /product="alpha-N-acetylglucosaminidase isoform X1"
                     /protein_id="XP_002727861.2"
                     /db_xref="GeneID:360630"
                     /db_xref="RGD:1564228"
                     /translation="MGAAGLAAILGFLLLARDLVGDEAQEAEAVRELVVRLLGPGPAA
                     DFLVSVERALANESGLDTYSLSGGGGVPVLVRGSSGVAAAAGLHRYLRDFCGCHIAWS
                     SSQLHLPSPLPAVPDGLTEATPNRYRYYQNVCTHSYSFVWWDWARWEQEIDWMALNGI
                     NLALAWNGQEAIWQRVYLALGLTQSEIDNYFTGPAFLAWGRMGNLHTWDGPLPRSWHL
                     KQLYLQHRILDRMRSFGMTPVLPAFAGHVPKAITRVFPQVNVIQLGNWGHFNCSYSCS
                     FLLAPGDPLFPLIGTLFLRELTKEFGTDHIYGADTFNEMQPPFSDPSYLAAATAAVYE
                     AMVTVDPDAVWLLQGWLFQHQPQFWGPSQIKAVLEAVPRGRLLVLDLFAETQPVYSRT
                     ASFHGQPFIWCMLHNFGGNHGLFGALEDVNQGPQAARLFPNSTMVGTGIAPEGIGQNE
                     VVYALMAELGWRKDPVPDLVAWVSSFASRRYGVSQPDAVAAWRLLLRSVYNCSGEACS
                     GHNRSPLVKRPSLQMSTAVWYNRSDVFEAWRLLLRAAPNLTASPAFRYDLLDVTRQAV
                     QELVSSCYEEARTAFLNQDLDLLLRAGGLLTYKLLPSLDELLASNSHFLLGTWLDQAR
                     EVAVSESEAQFYEQNSRYQITLWGPEGNILDYANKQLAGLVADYYQPRWCLFLGTLAH
                     SLARGIPFQQHQFEKSVFPLEQAFINNKKRYPIQPQGDTVDLSKKIFLKFHPQPDSL"
ORIGIN      
        1 ggatcttggt attggttgtg agccggccag agccgcgcgg ttggcatcat gggagccgcg
       61 gggctggcgg cgattctggg gttcttactc ctggcccggg acttggtggg tgatgaggct
      121 caggaggcag aggctgtacg ggagctggtg gtccggctac tgggacccgg gccggcggcc
      181 gatttcttgg tgtccgtgga gcgcgcgctg gcgaacgagt cgggcctgga cacctacagt
      241 ctgagcggag gtggaggggt gccagtgctt gtgcgtggct cctcgggcgt ggcggccgcc
      301 gcggggctgc accgctacct gcgtgacttc tgtggctgtc acatagcctg gtccagctct
      361 cagctgcacc tgccgtcgcc gctgcctgca gtgccggatg ggctgaccga agccacgccc
      421 aacaggtacc gctattacca gaatgtgtgc acgcacagct actccttcgt gtggtgggac
      481 tgggcccgtt gggagcaaga gattgactgg atggcgctga atggcatcaa cctggcacta
      541 gcttggaatg gccaggaggc catctggcaa cgggtatacc tggccttggg cctgacccag
      601 tcagagatcg ataactactt caccggtcct gccttcctgg cctggggacg catgggtaac
      661 ctgcacacct gggatggccc cctgccccgt tcctggcacc tcaagcaact ctacctgcag
      721 caccgaatcc tggaccggat gcgctccttt ggcatgaccc cagtgctgcc tgccttcgca
      781 gggcatgtcc ccaaggccat caccagggtg ttcccacagg tcaatgtcat ccagttgggg
      841 aactggggac atttcaactg ctcctacagc tgctccttcc ttttggctcc aggagacccc
      901 ctgttccccc tcattgggac cctcttccta cgggagctga ccaaagagtt cggcacggat
      961 cacatctacg gggctgacac cttcaatgag atgcagcctc ccttctccga tccctcctac
     1021 ctcgccgcag ccaccgcagc tgtctatgaa gccatggtca ctgtggaccc tgatgctgta
     1081 tggctgctcc aaggctggct cttccagcac cagccccagt tctggggccc ctctcaaatc
     1141 aaggctgtgc tggaggccgt gccccgtggt cgtctcctgg ttctagacct gttcgctgag
     1201 acccagcctg tttacagccg cacagcctcc ttccatggcc agcccttcat ctggtgcatg
     1261 ctccacaact ttgggggcaa ccatggcctg ttcggagccc tcgaggatgt gaaccagggt
     1321 ccccaggcag cccgcctctt ccccaactcc accatggtcg gcactggcat agcccctgag
     1381 ggcattggcc agaatgaagt ggtctatgct ctcatggctg agctgggctg gcgcaaggat
     1441 cctgtgccgg atttggtagc ctgggtgagc agttttgcca gccgccggta cggggtctcc
     1501 cagccggatg cagtggcagc ctggaggctc ctactcagga gtgtctacaa ctgctctggg
     1561 gaggcgtgca gcgggcacaa tcgaagccca ctggtcaagc ggccatccct acagatgagt
     1621 accgctgtct ggtacaacag atcagatgtg tttgaggctt ggcgactgct gttaagagct
     1681 gctccaaacc tgaccgccag cccagccttc cgctacgacc tgctggatgt cacccgtcaa
     1741 gcggtgcagg agctggtcag ctcgtgctat gaggaggcaa ggaccgcctt cctgaatcag
     1801 gatcttgatc tcctgctcag ggctggaggc ctcctgacct ataagcttct gccttcacta
     1861 gatgaactgc tggctagcaa cagccacttc ttgctgggga cctggttaga tcaggcccgg
     1921 gaagtggctg tgagtgagtc tgaggcccag ttctatgaac aaaacagccg ctaccagatt
     1981 accctttggg ggcctgaggg taacattttg gactatgcca ataagcaact ggcaggactg
     2041 gtggctgatt actaccagcc acgttggtgt ctcttcttgg ggaccctggc tcacagccta
     2101 gccagaggga tccccttcca acagcaccag tttgagaaga gtgttttccc actagagcag
     2161 gctttcatta acaacaagaa gaggtatccc attcagcccc aaggggatac tgtggacctc
     2221 tccaagaaga tcttcctcaa atttcacccc cagcctgact ctttgtgaca gatcagccat
     2281 ctcgaggacc tgctggaata ggtcctcaaa tccaaacatg cacaggatgc ttcccacgat
     2341 ttggaggaga cagggtctga cagtgacagt aatggcttgg agggaaatgg ggtgctttct
     2401 tccaccccag acttgggggt taaagtacca ttttctgtta acaataaacc actgaatccg
     2461 cctgggtcta ttaaagta
//
