LOCUS       XM_039083850            1978 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nucleic acid binding protein 1
            (Nabp1), transcript variant X4, mRNA.
ACCESSION   XM_039083850
VERSION     XM_039083850.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039083850.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1978
                     /gene="Nabp1"
                     /gene_synonym="Obfc2a; RGD1306658"
                     /note="nucleic acid binding protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 24 ESTs, 5 long SRA reads, 3 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 34 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:363227"
                     /db_xref="RGD:1306658"
     CDS             302..820
                     /gene="Nabp1"
                     /gene_synonym="Obfc2a; RGD1306658"
                     /codon_start=1
                     /product="SOSS complex subunit B2 isoform X3"
                     /protein_id="XP_038939778.1"
                     /db_xref="GeneID:363227"
                     /db_xref="RGD:1306658"
                     /translation="MPEEGRVTKTKDGHEVRSCKVADRTGSITISVWDEIGGLIQTGD
                     IIRLTRGYASMWKGCLTLYTGRGGELQKIGEFCMVYSEVPNFSEPNPDYRGQQNRVVQ
                     NEQKDKMNTSIFGTVGNGVQTGPESRGYPLQYGRSNGPGPISPQLPGEPSNQTVRTTI
                     SNARDPRRAFKR"
ORIGIN      
        1 cagaggcgtg ctagtgggcg tggtgacgtc gcgtgacgcc ataaggggcg gggcgcggct
       61 taataaagct gagggcgcat tcgccggttg ctgtttcgga cgcgggctgc gtggttggtg
      121 tacagcgttg ctgttttgct gtcacgtacc ttcccggagc ctgggactga gggggcgcgc
      181 gcgtgtaagt gaggtccgca gcccgcccca caccctcgag cgctcggact tcttccccgc
      241 ccgcgacccc acgtgctccc agctgagact cctacccggg gacagaagtc agtcacgtag
      301 catgccagag gagggacgag tgaccaaaac caaagacggc catgaagtga gatcctgcaa
      361 agtagctgat agaacgggaa gcatcactat ttctgtgtgg gatgagatcg gagggctcat
      421 acagacaggg gatattattc gattgaccag aggatatgca tcaatgtgga aaggatgcct
      481 gacactttat actggaagag gtggtgaact tcaaaaaatt ggagaatttt gtatggtgta
      541 ttcagaagtg ccaaatttca gtgagccaaa cccagattat agaggacagc agaacagagt
      601 ggtacaaaat gaacagaagg ataaaatgaa caccagtata ttcgggacag tgggaaatgg
      661 tgttcagact ggccctgaat ctaggggata tcctcttcaa tatggcagaa gcaatggccc
      721 aggacccatc agtccacagc taccaggaga acctagtaat caaacagtca ggaccacaat
      781 aagtaatgcc agagatccga ggagagcctt taaaagatga cctaagccaa agagacacat
      841 gtagttttta aactacgtga cctacttgaa cacttagtgc acttttattt attcttaact
      901 gtgaaaactt tgtctcttac gggtttcctt ttatattttt ggtttgttaa aaagagtggt
      961 tggtttttac tgaaaaactg ttacgctgct cagttccatc ctgttgaaga ataggaactc
     1021 tgaaaagcag gaacatttat ttttagagca aggacttact gggtatcact tgaaaacttg
     1081 tccctgtttc aagggcgagt tacttaagac accagcttat atatagcttc tgtgagtctg
     1141 gcttctgcat aaactttgta atgtttgcca tgaggtttag tggaaaatgt tcttttgtct
     1201 caaacttgga tattgctacc tgaagtaata aacaccccaa gccagaaact tggtcagtgc
     1261 tggcaacatt ttttgagtgt ttgtgatcca ggaatcctag agtgaccgcc tgccattaag
     1321 atttttccaa ggacagagtc atcccaaact cttgtttaat taccagataa ccagattctt
     1381 tatcagaatt atggaataaa atatgtactg taacaaataa tttttagaag aaaactgttt
     1441 aagataatgc tcttaacatt tttttttgca aacattgaag attacattga agaaaaattt
     1501 acaactgagt ccctgaatgt tttatttttg aagttaccat gttaaatgtt aaagtgtcat
     1561 tggagggatt gaaggaagct ataatacctt attggacagt ggtctcattt attaaagctg
     1621 tgcagcacaa cacaaggcta atctgattat ttaaaaaaag aacaaatact catggtagtt
     1681 attgtagtaa atacaagtca aattgaattc atatagccat gtgaccacca gttacaagta
     1741 gtcagttaga agtagacatt cctttcttcc agggctgtgt gtgtgtaaag tttctgaaca
     1801 agtcacatag ccttactagc aaaagttaaa tggctcaaga agtgatgata cctctgttaa
     1861 ggtgcaattt gtgtggtggg acttgactta tggtgggtaa ttggtaattt ttttcattgt
     1921 tagtatttgt ctctccttaa atattgtctc ttgagtaaaa accttgctct aatgatga
//
