LOCUS       XM_039083849             913 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus nucleic acid binding protein 1
            (Nabp1), transcript variant X3, mRNA.
ACCESSION   XM_039083849
VERSION     XM_039083849.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039083849.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..913
                     /gene="Nabp1"
                     /gene_synonym="Obfc2a; RGD1306658"
                     /note="nucleic acid binding protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 37 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:363227"
                     /db_xref="RGD:1306658"
     CDS             485..814
                     /gene="Nabp1"
                     /gene_synonym="Obfc2a; RGD1306658"
                     /codon_start=1
                     /product="SOSS complex subunit B2 isoform X2"
                     /protein_id="XP_038939777.1"
                     /db_xref="GeneID:363227"
                     /db_xref="RGD:1306658"
                     /translation="MHGVNDPPLFIKDIKAGLKNLNVVFIVLEIGRVTKTKDGHEVRS
                     CKVADRTGSITISVWDEIGGLIQTGDIIRLTRGYASMWKGCLTLYTGRGGELQKIGEY
                     KMNRRIK"
ORIGIN      
        1 taataaagct gagggcgcat tcgccggttg ctgtttcgga cgcgggctgc gtggttggtg
       61 tacagcgttg ctgttttgct gtcacgtacc ttcccggagc ctgggactga gggggcgcgc
      121 gcgtgtgcgt gtgtttgagg gaaagcggga ctcgggcagg gccgtcccct gttccctttt
      181 cccttagcgg aggcggcagt ctgcacgctc gtttgctcgc cgcccacttg ggagcggtct
      241 cggggtgctt ttttgatttt ggaacttgtg agagtctccc ccgaccccca ctcccctctt
      301 ccattttttt ttcccccttt cggcttggcg cctctagggc tggtttcccc ggcccctgaa
      361 taaccgcttc ccgactctgg tcgccaggcc tgcctcaggt tgcccccggc tctgcccctg
      421 gcctcggagg gtgggaagcc ttgcttagag ggtctctgaa gcttagccgc acctgcctct
      481 cagtatgcat ggggtcaacg accctcctct ttttataaaa gacattaagg ccggactgaa
      541 aaacttaaat gtcgtcttta ttgtcctgga gataggacga gtgaccaaaa ccaaagacgg
      601 ccatgaagtg agatcctgca aagtagctga tagaacggga agcatcacta tttctgtgtg
      661 ggatgagatc ggagggctca tacagacagg ggatattatt cgattgacca gaggatatgc
      721 atcaatgtgg aaaggatgcc tgacacttta tactggaaga ggtggtgaac ttcaaaaaat
      781 tggagagtac aaaatgaaca gaaggataaa atgaacacca gtatattcgg gacagtggga
      841 aatggtgttc agactggccc tgaatctagg ggatatcctc ttcaatatgg cagaagcaat
      901 ggcccaggac cca
//
