LOCUS       NM_001105794             711 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus N(alpha)-acetyltransferase 38, NatC auxiliary
            subunit (Naa38), mRNA.
ACCESSION   NM_001105794 XM_001079364 XM_213347
VERSION     NM_001105794.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Starheim KK, Gromyko D, Evjenth R, Ryningen A, Varhaug JE,
            Lillehaug JR and Arnesen T.
  TITLE     Knockdown of human N alpha-terminal acetyltransferase complex C
            leads to p53-dependent apoptosis and aberrant human Arl8b
            localization
  JOURNAL   Mol Cell Biol 29 (13), 3569-3581 (2009)
   PUBMED   19398576
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000220.1.
            
            [WARNING] On Mar 25, 2024 this sequence was replaced by
            NM_001105794.3.
            
            On Dec 23, 2009 this sequence version replaced NM_001105794.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BQ211461.1, BQ190595.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-366               JACYVU010000220.1  10942694-10943059
            367-550             JACYVU010000220.1  10943268-10943451
            551-711             JACYVU010000220.1  10943611-10943771
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q24"
     gene            1..711
                     /gene="Naa38"
                     /gene_synonym="Lsmd1; RGD1559617"
                     /note="N(alpha)-acetyltransferase 38, NatC auxiliary
                     subunit"
                     /db_xref="GeneID:287429"
                     /db_xref="RGD:1559617"
     exon            1..366
                     /gene="Naa38"
                     /gene_synonym="Lsmd1; RGD1559617"
                     /inference="alignment:Splign:2.1.0"
     CDS             286..663
                     /gene="Naa38"
                     /gene_synonym="Lsmd1; RGD1559617"
                     /note="LSM domain-containing 1"
                     /codon_start=1
                     /product="N(alpha)-acetyltransferase 38, NatC auxiliary
                     subunit"
                     /protein_id="NP_001099264.2"
                     /db_xref="GeneID:287429"
                     /db_xref="RGD:1559617"
                     /translation="MAGAGPTMLLREENGCCSRRQSSSSAGDSDGEQEDSPAARARQQ
                     LEALLNKTMRIRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFSAGEPRVLGLA
                     MVPGHHIVSIEVQRESLSGGPYL"
     exon            367..550
                     /gene="Naa38"
                     /gene_synonym="Lsmd1; RGD1559617"
                     /inference="alignment:Splign:2.1.0"
     exon            551..711
                     /gene="Naa38"
                     /gene_synonym="Lsmd1; RGD1559617"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagaggaga ctagagtaga agattgttta agtcaccaaa tctccaggcg tttctaaaag
       61 ctgttttaag aaatttcagg taaagttctc gcgatatttt tttatagtct agtcggcatc
      121 taggaacctg gcatgaaaca aaatctcgcg agatctctgc agtggcggaa ccggagatga
      181 ggaattgtga tctcacgaaa gagcttggga gcactcgcga gatctgacgc gccgacccca
      241 aaacgctctt aggaagttta aggcccaaag gaggtcccag ggccaatggc cggagctggg
      301 ccgaccatgc tactacgaga ggagaatggc tgttgcagtc ggcgtcagag cagctccagc
      361 gccggggact ctgatgggga acaggaggac tcgcctgcag cgcgtgcccg gcagcagcta
      421 gaggcattgc tcaacaagac catgcgtatt cgtatgacag acggaaggac actagtcggc
      481 tgcttcctgt gcaccgatcg tgactgtaat gtcatcctgg gctctgcgca agaattcctc
      541 aagccttctg attcattttc tgcgggggaa ccccgtgtgc tgggtctcgc catggtacca
      601 ggacaccaca tcgtttctat tgaagtccaa agggagagtc tgtcgggggg cccgtatctc
      661 tgaccacgat tgcacttctc tttgagacca ttaaacccta tgaccaaagt g
//
