LOCUS       XM_006248735            2216 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus NEDD4 binding protein 2-like 2
            (N4bp2l2), transcript variant X2, mRNA.
ACCESSION   XM_006248735
VERSION     XM_006248735.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006248735.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006248735.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2216
                     /gene="N4bp2l2"
                     /note="NEDD4 binding protein 2-like 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 1 long SRA read, 1 Protein, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 8 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:288416"
                     /db_xref="RGD:1359603"
     CDS             177..2201
                     /gene="N4bp2l2"
                     /codon_start=1
                     /product="NEDD4-binding protein 2-like 2 isoform X2"
                     /protein_id="XP_006248797.2"
                     /db_xref="GeneID:288416"
                     /db_xref="RGD:1359603"
                     /translation="MPGVSPRCCMGNPRGGGHLVYGTAPVSRLFPAPFSSYVLDGLST
                     SQRFVYSRKFFLGEDLGRKVVEVHTELWLEMPYSEIEAKFLGPGKELTREPCYKKLKS
                     AVDDGVFPHRGGPDSHRIQEKTKNNRLPVATINFRRRVCPGEDKTSTDVLKPLHKEMP
                     GDKVGGTESIGSQALQDGKPLAPARDDEIYSTSKAFIGPIYKPPEKKKCRERKNETAT
                     FNNTDSKRRQEEKQKFNSKKLEIDTELSQFYKEIEELENENEASQGSCKEPEPSQEQT
                     LSHDQACNTLKPEGESKDLSTVLQSHCGYQPYLEDESDYPCDEQLIPAFCDTSFPSFR
                     PEWQSVHPFVIPHDPLPSFNYFNIQRFGAPLHPPPSVFHARDDARLQSGCYIDSYQDG
                     WSCLTLDQNDEYANYDVPGNVHPFGNGYGVQDDSVKNGFCEIRECWQDPSMDMHNEAD
                     RFVNQCFQEDRLNKLQKLLILLRGLPGSGKTTLSRILLGQSRDGIVFSTDDYFHHQDG
                     YRYNVNQLGDAHDWNQNRAKQAIDQGRSPVIIDNTNTQAWEMKPYVEMAIGKGYRVEF
                     HEPETWWKFDPEELEKRNKHGVSRKKIAQMLDRYEFQMSISIVMNSVEPTQKSTQTPL
                     PLQGDQRSNSACLVVTLCACSHLRQEEASVMMAEQDTDLRPGSLLLEKGR"
ORIGIN      
        1 tttacaaagt tggtgtttct ttaactaact tccccaactc caggactggg aacaagactg
       61 agtctacgtt tgtggccaaa atagcacagg cgtcatgcaa tggactctgg aagactgagt
      121 ctcggtggca cgaggtaaac taggattgca gggaacgccg gacttcaatc cccataatgc
      181 ctggcgtgag cccgcggtgc tgcatgggta atccaagagg tggcggccat cttgtgtatg
      241 gaactgctcc agtctcgcgt ctctttccag ctccgtttag tagctacgtt ttggacggtc
      301 tctcgacttc ccagaggttc gtgtattcgc ggaagttctt tttgggggag gacttgggga
      361 ggaaggtggt ggaagtacat acagagctgt ggcttgagat gccttatagt gaaattgaag
      421 ctaagttttt gggacctgga aaagaactaa caagggaacc atgttataaa aagttgaaat
      481 cagctgtaga tgatggtgtt ttcccccatc gaggtggacc tgatagtcac agaatccaag
      541 agaaaactaa aaataatagg ctccctgtgg ccaccattaa cttcagaaga cgtgtttgtc
      601 ctggagaaga caaaaccagt acagatgtgt taaagccttt gcacaaggag atgcctggtg
      661 ataaagtggg tggcactgaa tccatcggtt cacaagcttt gcaggatgga aagcctttag
      721 caccagccag ggatgatgaa atctatagca caagtaaagc attcataggc cccatttaca
      781 aaccccctga aaaaaagaaa tgccgtgaga ggaagaatga gacagctact ttcaataata
      841 cagatagcaa aagaagacaa gaggaaaaac aaaaatttaa ctccaaaaaa ttggagattg
      901 acacagagtt atcgcagttt tacaaagaaa tcgaagaact ggaaaatgaa aatgaagctt
      961 cccaaggcag ttgtaaggaa ccagaacctt cccaggaaca gactctttct catgaccagg
     1021 cctgcaatac cttaaaacct gagggggaaa gtaaagatct gagcactgtt cttcagtcac
     1081 actgcggcta tcaaccatac ctggaagatg aatcagacta tccctgtgat gaacagttga
     1141 tacctgcatt ttgtgatact tcatttcctt ccttcaggcc tgagtggcag tcagtacatc
     1201 cttttgtcat accccatgat cctctgccca gttttaatta ctttaatatt caaagatttg
     1261 gtgccccact acatccacca ccaagcgttt tccatgcgcg agatgacgct cggttgcaga
     1321 gtgggtgtta catagacagt tatcaggacg gctggagctg tttgactttg gatcagaacg
     1381 atgagtatgc taactatgat gtgcctggca atgtccaccc ctttggaaat ggctatggtg
     1441 tacaagatga cagtgtgaag aatggtttct gtgaaatcag agagtgctgg caagatcctt
     1501 ccatggacat gcataatgaa gcagacaggt ttgtgaacca gtgctttcaa gaggacaggt
     1561 taaataaatt gcagaaatta cttattcttc tgcgaggcct ccccggttct ggaaaaacaa
     1621 cattgtctcg aattctgctt ggtcagagtc gtgatggcat cgtgttcagc actgatgact
     1681 actttcatca tcaagatggg tacaggtaca atgttaatca gcttggtgat gcccatgact
     1741 ggaaccagaa cagagcaaaa caagctatcg atcaggggag atctccagtt atcatagaca
     1801 acactaatac acaagcctgg gaaatgaaac cctatgtgga aatggccata ggaaaaggat
     1861 acagagtaga gtttcatgaa ccggaaactt ggtggaagtt tgaccctgaa gaattagaaa
     1921 agaggaataa acatggcgtg tctcgaaaga agattgctca gatgttagac cgttatgaat
     1981 ttcaaatgtc catctccatc gtgatgaatt cagtggaacc aacacagaaa agcacacaaa
     2041 caccccttcc tctccagggg gaccagaggt ctaactctgc gtgtctggtt gtgactctct
     2101 gcgcgtgttc ccatctgcgg caggaggaag catctgtgat gatggctgag caagacactg
     2161 atctaaggcc tggctcactg cttctagaaa aaggacggta acttgagaga gcattc
//
