LOCUS       NM_176079               1948 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus myogenic differentiation 1 (Myod1), mRNA.
ACCESSION   NM_176079
VERSION     NM_176079.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1948)
  AUTHORS   Li,D., Zhang,C., Li,J., Che,J., Yang,X., Xian,Y., Li,X. and Cao,C.
  TITLE     Long non-coding RNA MALAT1 promotes cardiac remodeling in
            hypertensive rats by inhibiting the transcription of MyoD
  JOURNAL   Aging (Albany NY) 11 (20), 8792-8809 (2019)
   PUBMED   31619581
  REMARK    GeneRIF: Long non-coding RNA MALAT1 promotes cardiac remodeling in
            hypertensive rats by inhibiting the transcription of MyoD.
REFERENCE   2  (bases 1 to 1948)
  AUTHORS   Alves,A.N., Ribeiro,B.G., Fernandes,K.P., Souza,N.H., Rocha,L.A.,
            Nunes,F.D., Bussadori,S.K. and Mesquita-Ferrari,R.A.
  TITLE     Comparative effects of low-level laser therapy pre- and post-injury
            on mRNA expression of MyoD, myogenin, and IL-6 during the skeletal
            muscle repair
  JOURNAL   Lasers Med Sci 31 (4), 679-685 (2016)
   PUBMED   26914683
  REMARK    GeneRIF: low-level laser therapy (LLLT) administered following
            muscle injury modulates the mRNA expression of MyoD and myogenin.
            Moreover, the both forms of LLLT administration were able to
            modulate the mRNA expression of IL-6 during the muscle repair
            process.
REFERENCE   3  (bases 1 to 1948)
  AUTHORS   Zhou,L., Sun,K., Zhao,Y., Zhang,S., Wang,X., Li,Y., Lu,L., Chen,X.,
            Chen,F., Bao,X., Zhu,X., Wang,L., Tang,L.Y., Esteban,M.A.,
            Wang,C.C., Jauch,R., Sun,H. and Wang,H.
  TITLE     Linc-YY1 promotes myogenic differentiation and muscle regeneration
            through an interaction with the transcription factor YY1
  JOURNAL   Nat Commun 6, 10026 (2015)
   PUBMED   26658965
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1948)
  AUTHORS   Kodama,H., Kumai,Y., Nishimoto,K., Sanuki,T. and Yumoto,E.
  TITLE     Modulation of satellite cells activity and MyoD in rat
            thyroarytenoid muscle after reinnervation
  JOURNAL   Laryngoscope 125 (7), E245-E251 (2015)
   PUBMED   25809587
  REMARK    GeneRIF: NMJ formation following reinnervation might prompt
            recovery of M-cadherin and MyoD mRNA expression to the quiescent
            level of SCs
REFERENCE   5  (bases 1 to 1948)
  AUTHORS   Anderson,D.M., Anderson,K.M., Chang,C.L., Makarewich,C.A.,
            Nelson,B.R., McAnally,J.R., Kasaragod,P., Shelton,J.M., Liou,J.,
            Bassel-Duby,R. and Olson,E.N.
  TITLE     A micropeptide encoded by a putative long noncoding RNA regulates
            muscle performance
  JOURNAL   Cell 160 (4), 595-606 (2015)
   PUBMED   25640239
REFERENCE   6  (bases 1 to 1948)
  AUTHORS   Engert,J.C., Servaes,S., Sutrave,P., Hughes,S.H. and Rosenthal,N.
  TITLE     Activation of a muscle-specific enhancer by the Ski proto-oncogene
  JOURNAL   Nucleic Acids Res 23 (15), 2988-2994 (1995)
   PUBMED   7659522
REFERENCE   7  (bases 1 to 1948)
  AUTHORS   Weis,J.
  TITLE     Jun, Fos, MyoD1, and myogenin proteins are increased in skeletal
            muscle fiber nuclei after denervation
  JOURNAL   Acta Neuropathol 87 (1), 63-70 (1994)
   PUBMED   8140895
REFERENCE   8  (bases 1 to 1948)
  AUTHORS   Vaidya,T.B., Rhodes,S.J., Moore,J.L., Sherman,D.A., Konieczny,S.F.
            and Taparowsky,E.J.
  TITLE     Isolation and structural analysis of the rat MyoD gene
  JOURNAL   Gene 116 (2), 223-230 (1992)
   PUBMED   1321778
REFERENCE   9  (bases 1 to 1948)
  AUTHORS   Dyson,P.J., de Smet,C., Knight,A.M., Simon-Chazottes,D.,
            Guenet,J.L. and Boon,T.
  TITLE     Mapping of the genes encoding tum- transplantation antigens P91A,
            P35B, and P198
  JOURNAL   Immunogenetics 35 (5), 316-323 (1992)
   PUBMED   1348494
REFERENCE   10 (bases 1 to 1948)
  AUTHORS   Murre,C., McCaw,P.S., Vaessin,H., Caudy,M., Jan,L.Y., Jan,Y.N.,
            Cabrera,C.V., Buskin,J.N., Hauschka,S.D., Lassar,A.B. et al.
  TITLE     Interactions between heterologous helix-loop-helix proteins
            generate complexes that bind specifically to a common DNA sequence
  JOURNAL   Cell 58 (3), 537-544 (1989)
   PUBMED   2503252
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Nov 27, 2020 this sequence version replaced NM_176079.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC127480.1, SRR26643295.2365.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760386, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-837               JAXUCZ010000001.1  106021161-106021997
            838-916             JAXUCZ010000001.1  106022451-106022529
            917-1948            JAXUCZ010000001.1  106022840-106023871
FEATURES             Location/Qualifiers
     source          1..1948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..1948
                     /gene="Myod1"
                     /note="myogenic differentiation 1"
                     /db_xref="GeneID:337868"
                     /db_xref="RGD:631429"
     exon            1..837
                     /gene="Myod1"
                     /inference="alignment:Splign:2.1.0"
     exon            838..916
                     /gene="Myod1"
                     /inference="alignment:Splign:2.1.0"
     exon            917..1948
                     /gene="Myod1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 taagctaggg gccaggacac cccaggacgc gactgctttc ttcaccacac ctctgacagg
       61 acaggacagg gagggaaggt agaggacagc aggtgtgcat tccaaccgtc agaaccattg
      121 tcattgtact attggggttc aggagtgaca gaaagttaag acgactcttc aggcttgggt
      181 tgagcgagaa gcaggaccca gaactgggac atggagctac tatcgccgcc actccgggac
      241 acagacttgc taggccccga cggctctctc tgctcctttg cgacagccga tgacttctat
      301 gatgatccgt gtttcgactc accagacctg cgcttttttg aggacctgga cccgcgcctg
      361 gtgcacgtgg gagccctcct gaagccggag gagcacgcac acttccccac tacggtgcac
      421 ccaggcccag gcgctcgcga ggatgagcat gtgcgcgcgc ccagcgggca ccaccaggcg
      481 ggtcgctgct tgctgtgggc ctgcaaggcg tgcaagcgca agaccactaa cgctgatcgc
      541 cgcaaggcag ccaccatgcg tgagcggcgc cgcctgagca aagtgaacga ggccttcgag
      601 acccttaagc gctgcacgtc cagcaacccg aaccagcggc tacccaaggt ggagatcctg
      661 cgcaacgcca tccgctacat tgaaggtctg caggctctgc tgcgcgacca ggacgccgct
      721 ccccctggcg ccgctgcctt ctacgcacct ggcccgctgc ccccaggccg tggcagtgag
      781 cactacagcg gcgactcaga cgcgtccagc ccgcgctcca actgctctga tggcatgatg
      841 gattacagcg gccccccaag cggcccccgg cggcagaatg gctacgacgc cgcctactac
      901 agtgaggcgt ccagcgagcc cagaccaggg aagagtgcgg ccgtgtcgag cctcgactgc
      961 ctgtccagca tagtggagcg catctccaca gacagccccg ctgcgccttc gctgcttttg
     1021 ccagatgcgc caccagagtc gcctccgggt ccgccagagg agacatcctc aagcgatgca
     1081 gaacagggga cccagacccc gtctcccgac tccacccctc agtgtcctgc aggctcaaag
     1141 cccaatccga tttaccaggt gctctgagag gttggctgca gcagcagagg gcgcccggtc
     1201 tgcactcatg gggatggtgc ccctgggtcc ttcatgcccc cccaaaaatg aagcttaaat
     1261 gacactcctc ccaattgtcc tttcaaagcc attcttccag agggaaggga agagcagaag
     1321 tttgttgtcc tacatccggc cccaaggaaa agacgaagtc tggttgttgt tgctgctgct
     1381 gttgttgttg ttgttgttgt tgttgttgta gtcatggggt tttttgtttg tttgttttgt
     1441 ttttcatgcg actcacagcg aaggccactt gctgtccctc actgggccag agctgatctt
     1501 tgagtggcca ggacctcttt cctttcctca cagtccctag cacagggtga gcctcgcaca
     1561 cttaagccct gccttccaca tccctgttgt ttgtggagac actgttccca ctttctggag
     1621 cccccccccg acacccactc tttcccacag cttgcggagg ccactcagat ctcgggtgta
     1681 acaggtgtaa caaccatacc ccactctctc ccttcccatg gttcaggacc acttattttt
     1741 tttatattaa gacttttgta atctattcgt gtaaataaga gttgcttggc cagagctgga
     1801 gccccgtggg ctgtatttat ctccgaggca tgctgtgtag tgcaacaaaa tctttgtatg
     1861 tttattcctc aagcgggcga gcctcgaggc tcattcgctc aggtgttgga aataaagatg
     1921 ctaatttata caacagtggc tctggctt
//
