LOCUS       NP_001101546            1098 aa            linear   ROD 31-MAR-2024
DEFINITION  unconventional myosin-If [Rattus norvegicus].
ACCESSION   NP_001101546 XP_001079144 XP_234942
VERSION     NP_001101546.1
DBSOURCE    REFSEQ: accession NM_001108076.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (residues 1 to 1098)
  AUTHORS   Archambaud,C., Nahori,M.A., Soubigou,G., Becavin,C., Laval,L.,
            Lechat,P., Smokvina,T., Langella,P., Lecuit,M. and Cossart,P.
  TITLE     Impact of lactobacilli on orally acquired listeriosis
  JOURNAL   Proc Natl Acad Sci U S A 109 (41), 16684-16689 (2012)
   PUBMED   23012479
REFERENCE   2  (residues 1 to 1098)
  AUTHORS   Kim,S.V., Mehal,W.Z., Dong,X., Heinrich,V., Pypaert,M., Mellman,I.,
            Dembo,M., Mooseker,M.S., Wu,D. and Flavell,R.A.
  TITLE     Modulation of cell adhesion and motility in the immune system by
            Myo1f
  JOURNAL   Science 314 (5796), 136-139 (2006)
   PUBMED   17023661
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000007.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XP_234942.3, XP_001079144.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.25952.1,
                                           SRR26643299.29996.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1098
                     /organism="Rattus norvegicus"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11-q13"
     Protein         1..1098
                     /product="unconventional myosin-If"
                     /note="myosin-If"
                     /calculated_mol_wt=125188
     Region          31..677
                     /region_name="MYSc_Myo1"
                     /note="class I myosin, motor domain; cd01378"
                     /db_xref="CDD:276829"
     Site            order(58..61,66,110..117,157..167,386..391)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:276829"
     Site            order(58..61,66)
                     /site_type="other"
                     /note="purine-binding loop"
                     /db_xref="CDD:276829"
     Site            110..117
                     /site_type="other"
                     /note="P-loop"
                     /db_xref="CDD:276829"
     Site            157..167
                     /site_type="other"
                     /note="switch I region"
                     /db_xref="CDD:276829"
     Site            386..391
                     /site_type="other"
                     /note="switch II region"
                     /db_xref="CDD:276829"
     Site            order(415..426,429..436,438)
                     /site_type="other"
                     /note="relay loop"
                     /db_xref="CDD:276829"
     Site            609..619
                     /site_type="other"
                     /note="SH1 helix"
                     /db_xref="CDD:276829"
     Site            order(621..647,664..677)
                     /site_type="other"
                     /note="converter subdomain"
                     /db_xref="CDD:276829"
     Region          717..915
                     /region_name="Myosin_TH1"
                     /note="Unconventional myosin tail, actin- and
                     lipid-binding; pfam06017"
                     /db_xref="CDD:461801"
     Region          <924..>1044
                     /region_name="PHA03378"
                     /note="EBNA-3B; Provisional"
                     /db_xref="CDD:223065"
     Region          1045..1097
                     /region_name="SH3_MyoIe_If_like"
                     /note="Src homology 3 domain of Myosins Ie, If, and
                     similar proteins; cd11827"
                     /db_xref="CDD:212761"
     Site            order(1050,1052,1055,1059,1077..1078,1091,1093..1094)
                     /site_type="other"
                     /note="peptide ligand binding site [polypeptide binding]"
                     /db_xref="CDD:212761"
     CDS             1..1098
                     /gene="Myo1f"
                     /coded_by="NM_001108076.2:145..3441"
                     /db_xref="GeneID:314654"
                     /db_xref="RGD:1309750"
ORIGIN      
        1 mgskerfhwq shnvkqsgvd dmvllpqite daivsnlrkr fmddyiftyi gsvlisvnpf
       61 kqmpyftdre idlyqgaaqy enpphiyalt dnmyrnmlid cenqcviisg esgagktvaa
      121 kyimgyiskv sgggdkvqhv kdiilqsnpl leafgnaktv rnnnssrfgk yfeiqfsrgg
      181 epdggkisnf lleksrvvmq nenernfhiy yqllegasqe qqqnlglmtp dyyyylnqsd
      241 tykvegtddr sdfnetlnam qvigiptsvq qlvlqlvagi lhlgnisfce egnyarvesv
      301 dllafpayll gidsgrlqek ltsrkmdskw ggrsesidvt lnveqaaytr dalakglyar
      361 lfdflveain ramqkpqeey sigvldiygf eifqkngfeq fcinfvnekl qqifieltlk
      421 aeqeeyvqeg irwtpieyfn nkivcdlien klnppgimsv lddvcatmha tgggadqtll
      481 qklqaavgth ehfnswsagf vihhyagkvs ydvsgfcern rdvlfsdlie lmqssdqafl
      541 rmlfpekldv dkkgrpstag skikkqandl vstlkkctph yircikpnet krprdweesr
      601 vkhqveylgl renirvrrag fayrrqfskf lqryailtpe twprwrgder qgvqhllrav
      661 nmepdqyqmg stkvfvknpe slflleemre rkfdgfarti qkawrrhiav rkyeemreea
      721 snillnkker rrnsinrnfv gdylgleerp elrqflakre rvdfadsvtk ydrrfkpikr
      781 dliltpkcvy vigrekvkkg pekglvrevl kkkleiqalr gvslstrqdd ffilqeeaad
      841 sflesifkte fvsllckrfe eaarrplplt fsdmlqfrvk kegwgggstr nvtfsrgtgd
      901 lavlkagsra ltisigdglp kstkptrkgl aqgrprrsaq aptraapgpp rglnrngvpp
      961 ssqvrslpme itsgrssqrp prgppsstlg asrrprarpp sehnteflnv pdqgvagmqr
     1021 krsigqrpvp gvgrpkpqpr thgprcraly qyigqdvdel sfnvneviei lmedssgwwk
     1081 grlhgqeglf pgnyveki
//
