LOCUS       XM_039086841             887 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus myosin, light chain 4 (Myl4),
            transcript variant X1, mRNA.
ACCESSION   XM_039086841
VERSION     XM_039086841.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039086841.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..887
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..887
                     /gene="Myl4"
                     /note="myosin, light chain 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 154 ESTs, 2 long SRA reads, 23 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 14 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:688228"
                     /db_xref="RGD:1591197"
     CDS             165..746
                     /gene="Myl4"
                     /codon_start=1
                     /product="myosin light chain 4 isoform X1"
                     /protein_id="XP_038942769.1"
                     /db_xref="GeneID:688228"
                     /db_xref="RGD:1591197"
                     /translation="MPPKKPEPKKETAKAAAAPAPAPAPAPEPLRDSAFDPKSVKIDF
                     SADQIEEFKEAFSLFDRTPTGEMKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEM
                     NSKTLDFEMFLPILQHISRNKEQGTYEDFVEGLRVFDKESNGTVMGAELRHVLATLGE
                     KMSEAEVEQLLTGQEDANGCINYEAFVKHVMSG"
ORIGIN      
        1 cctgtggccg gaaattatcg agtgctaccg gaaactgttg ggttgtaccc aataggaagt
       61 gtctcttctc agccacgcct ccgctcaatc agccacgcta attgggccac gcccaaagag
      121 caaccgtttt taggtcccac gtccactgga gatcctaagg cagcatgcct cccaagaagc
      181 ctgagcccaa gaaggagact gccaaggcag ccgcagcccc tgccccagct cctgccccag
      241 ctcccgagcc cctcagggac tctgcctttg atcccaagag tgtgaagata gacttcagtg
      301 ccgaccagat cgaagaattc aaagaggcct tttcattgtt tgaccggact ccaactggag
      361 agatgaaaat cacctatggg cagtgtgggg acgtgctgcg ggccctgggc cagaacccca
      421 ccaacgcaga ggtgctgcga gttttgggca aacccaagcc tgaagagatg aattccaaga
      481 cactggactt cgagatgttc ctgcccatcc tgcagcacat ctcccgcaac aaggagcagg
      541 gcacctatga ggacttcgtg gaggggctgc gggtctttga caaagaaagc aacggcacag
      601 tcatgggcgc cgagcttcgg catgtcctcg ccaccctggg agagaagatg agcgaggctg
      661 aggtggagca gctgttgact gggcaggagg atgccaacgg atgcatcaac tatgaagcct
      721 ttgtcaagca tgtcatgtcc gggtaaagac atttctccaa ggtgcttggc cccgcgtgag
      781 taagggagag agccatggtg gttgttacgg agcactggac tcatactggc ctcgcagacc
      841 cacggcctcc cctgtaaata aagaagccca gtgtggagtc tcaccaa
//
