LOCUS       NM_001106783            2055 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus myogenic factor 5 (Myf5), mRNA.
ACCESSION   NM_001106783 XM_001080763 XM_235101
VERSION     NM_001106783.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2055)
  AUTHORS   Bowlin KM, Embree LJ, Garry MG, Garry DJ and Shi X.
  TITLE     Kbtbd5 is regulated by MyoD and restricted to the myogenic lineage
  JOURNAL   Differentiation 86 (4-5), 184-191 (2013)
   PUBMED   24361185
REFERENCE   2  (bases 1 to 2055)
  AUTHORS   Yeung F, Chung E, Guess MG, Bell ML and Leinwand LA.
  TITLE     Myh7b/miR-499 gene expression is transcriptionally regulated by
            MRFs and Eos
  JOURNAL   Nucleic Acids Res 40 (15), 7303-7318 (2012)
   PUBMED   22638570
REFERENCE   3  (bases 1 to 2055)
  AUTHORS   Rajan S, Chu Pham Dang H, Djambazian H, Zuzan H, Fedyshyn Y, Ketela
            T, Moffat J, Hudson TJ and Sladek R.
  TITLE     Analysis of early C2C12 myogenesis identifies stably and
            differentially expressed transcriptional regulators whose
            knock-down inhibits myoblast differentiation
  JOURNAL   Physiol Genomics 44 (2), 183-197 (2012)
   PUBMED   22147266
REFERENCE   4  (bases 1 to 2055)
  AUTHORS   Dingemann J, Doi T, Ruttenstock E and Puri P.
  TITLE     The role of primary myogenic regulatory factors in the developing
            diaphragmatic muscle in the nitrofen-induced diaphragmatic hernia
  JOURNAL   Pediatr Surg Int 27 (6), 579-582 (2011)
   PUBMED   21258934
  REMARK    GeneRIF: Myf 5 mRNA and protein expression were not altered in the
            CDH group.
REFERENCE   5  (bases 1 to 2055)
  AUTHORS   Sambasivan R, Gayraud-Morel B, Dumas G, Cimper C, Paisant S, Kelly
            RG and Tajbakhsh S.
  TITLE     Distinct regulatory cascades govern extraocular and pharyngeal arch
            muscle progenitor cell fates
  JOURNAL   Dev Cell 16 (6), 810-821 (2009)
   PUBMED   19531352
  REMARK    Erratum:[Dev Cell. 2009 Jul;17(1):150. Kelly, Robert [corrected to
            Kelly, Robert G]]
REFERENCE   6  (bases 1 to 2055)
  AUTHORS   Brent AE, Braun T and Tabin CJ.
  TITLE     Genetic analysis of interactions between the somitic muscle,
            cartilage and tendon cell lineages during mouse development
  JOURNAL   Development 132 (3), 515-528 (2005)
   PUBMED   15634692
REFERENCE   7  (bases 1 to 2055)
  AUTHORS   Kaul A, Koster M, Neuhaus H and Braun T.
  TITLE     Myf-5 revisited: loss of early myotome formation does not lead to a
            rib phenotype in homozygous Myf-5 mutant mice
  JOURNAL   Cell 102 (1), 17-19 (2000)
   PUBMED   10929709
REFERENCE   8  (bases 1 to 2055)
  AUTHORS   Wang Y, Schnegelsberg PN, Dausman J and Jaenisch R.
  TITLE     Functional redundancy of the muscle-specific transcription factors
            Myf5 and myogenin
  JOURNAL   Nature 379 (6568), 823-825 (1996)
   PUBMED   8587605
REFERENCE   9  (bases 1 to 2055)
  AUTHORS   Grass S, Arnold HH and Braun T.
  TITLE     Alterations in somite patterning of Myf-5-deficient mice: a
            possible role for FGF-4 and FGF-6
  JOURNAL   Development 122 (1), 141-150 (1996)
   PUBMED   8565825
REFERENCE   10 (bases 1 to 2055)
  AUTHORS   Rudnicki MA, Schnegelsberg PN, Stead RH, Braun T, Arnold HH and
            Jaenisch R.
  TITLE     MyoD or Myf-5 is required for the formation of skeletal muscle
  JOURNAL   Cell 75 (7), 1351-1359 (1993)
   PUBMED   8269513
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473960.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_235101.4, XM_001080763.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760384,
                              SAMEA5760386 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2055
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q21"
     gene            1..2055
                     /gene="Myf5"
                     /note="myogenic factor 5"
                     /db_xref="GeneID:299766"
                     /db_xref="RGD:1308322"
     exon            1..730
                     /gene="Myf5"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..997
                     /gene="Myf5"
                     /codon_start=1
                     /product="myogenic factor 5"
                     /protein_id="NP_001100253.1"
                     /db_xref="GeneID:299766"
                     /db_xref="RGD:1308322"
                     /translation="MDMTDSCQFSPSEYFYDGSCIPSPEDEFGDQFEPRVAAFGAHKA
                     KLQGSDDEEHVRAPTGHHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQA
                     FETLKRCTTTNPNQRLPKVEILRNAIRYIESLQELLREQVENYYSLPGQSCSQPTSPT
                     SNCSDGMPECNSPVWSRKNSSFDSIYCPDVSNACASDKSSLSSLDCLSSIVDRITSAE
                     PSELALQDTASLSPAASTNSQPATPGSSSSRLIYHVL"
     exon            731..806
                     /gene="Myf5"
                     /inference="alignment:Splign:2.1.0"
     exon            807..2055
                     /gene="Myf5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccttcccat cccccaggaa tatataaaga gccccaacct cagccactga ccgaccctgg
       61 ccaacaggcg tctgtccttg ttaattacag agaaacaatc ccaaacccgg agcaatccca
      121 aacccggagc tccgagctcc gcctgggatt tgctggcctg cagcagccag ggactggcgt
      181 ttctccctct ctgctgaaac caggtatccc acctgcatct ctgaagaaca tggacatgac
      241 ggacagctgc cagttctcgc cttccgagta cttctatgac ggctcctgta tcccctcccc
      301 tgaggatgag tttggggacc agtttgagcc aagagtcgca gccttcggag cacacaaagc
      361 taagctgcag ggttcagacg atgaggagca cgtgcgtgca cctactggcc accaccaggc
      421 tggtcactgc ctcatgtggg cctgcaaagc ttgcaagagg aagtccacta ccatggatcg
      481 acgcaaggcc gccaccatgc gcgagcgcag acgcctgaag aaggtcaatc aagctttcga
      541 gacgctcaag cggtgcacca caaccaaccc taaccagaga cttcccaagg tggagatcct
      601 caggaatgca atccgctaca ttgagagtct tcaggagctg ctgagggagc aggtagagaa
      661 ctattacagc ctgcccggac agagctgctc ccagcccacc agccccacct ccaactgctc
      721 tgatggcatg cctgaatgta acagccctgt ctggtcccga aagaacagta gctttgacag
      781 catctactgc cctgatgtat caaacgcatg tgcttcagat aagagctcct tgtccagctt
      841 ggattgcttg tccagcatag tggatcggat cacgtctgca gagccatccg agttggctct
      901 tcaggacaca gcttctctct ctccagctgc cagcaccaat tcacagcctg caacccccgg
      961 gtcctccagt tccagactta tctatcacgt attatgaact atctcctggt gatcagtcct
     1021 gctaggaggg tctactacat gggagaaagg aagccccggg tcggaaggga agacaagcag
     1081 cacacaatat gtgcttttcc gttgtaaata ctgtcctgcc actttataag aaaatgtatt
     1141 taactcaaag tcccatctgc aataatgact tctcctctgc ctgttctttt tgctttgaat
     1201 tttagctttt gtttgcttta gatacatggt tccaaaaata tttttccaat ggaggcaatt
     1261 aattgacagt tactcatagt aatttttaac ttaaacatat attttgtaaa tattgctcat
     1321 caaaataact ttggtattta gagctctatt tttttcttca aaaagcattt taatagcttg
     1381 gaatccatta cagggaatta aatatatatt taacttttgc tgttctcttt aatcttttgt
     1441 taatagtata tcaaatgaaa atataacaat tctgcctaat gatatatatt ttcatctttt
     1501 tcttataaga aagacttctt tcaatgtaag caataaataa tacattgtgg ataatttcaa
     1561 aatataaaaa atttgtaaat ttcactataa ataaaattgt ttactgaaat aactaatttg
     1621 tttcttggct tttaaaaata acgtccccaa tgagattagc aaatcatgag catgaaacat
     1681 ttaagtatgt gttaattatg attatacagt tggccttata gataagtatg aaaataattt
     1741 acaaatttct tttagacttt ttgatgtcac cgtaaaaata ccctttttta ttttaaactt
     1801 atttcaagaa tgcccagtaa gtgaagcccc cttttccttg tttttattcc atacagtgtc
     1861 gagttgtata tgaaaaaata tagtaaaaat ttacaggaca atatcacttg tttaagcaaa
     1921 aaaatcttaa aacatattat gtcattttac tatatatagt acattgtcaa tcatgagcca
     1981 ggttttatta actttcatat atgcctgaac ttgataaata tagtattatt cacaataaaa
     2041 tgcttaaagg aggtg
//
