LOCUS       XM_006234930            2944 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus myelin expression factor 2 (Myef2),
            transcript variant X1, mRNA.
ACCESSION   XM_006234930
VERSION     XM_006234930.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234930.3.
            
            On Jan 21, 2021 this sequence version replaced XM_006234930.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2944
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2944
                     /gene="Myef2"
                     /note="myelin expression factor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 63
                     ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 240 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:679712"
                     /db_xref="RGD:1306547"
     CDS             129..1853
                     /gene="Myef2"
                     /codon_start=1
                     /product="myelin expression factor 2 isoform X1"
                     /protein_id="XP_006234992.1"
                     /db_xref="GeneID:679712"
                     /db_xref="RGD:1306547"
                     /translation="MADADKPEAAAGDDGPQQQPAEPRRDPHPGEPEKPPRSSANGVK
                     MENDESVKEEKSDLKEKSTGNKKANRFHPYSKDKNSGTGEKKGPNRNRVFISNIPYDM
                     KWQAIKDLMREKVGEVTYVELFKDAEGKSRGCGVVEFKDEEFVKKALETMNKYDLSGR
                     PLNIKEDPDGENARRALQRTGTSFQGSHASDVGSGLVNLPPSIVNNPNIPPEVINNLQ
                     AGRLGSTIFVANLDFKVGWKKLKEVFSIAGTVKRADIKEDKDGKSRGMGTVTFEQAIE
                     AVQAISMFNGQFLFDRPMHVKMDDKSVPHEDYRSHDSKTSQLPRGLGGIGMGLGPGGQ
                     PISASQLNITGVMGNLGPSGVGFGGLEAMNSMAGFGGVGRMGELYRGAMTSSMERDFG
                     RGDIGLSRGFGDSFGRLGSAMIGGFAGRIGASNMGPVGTGISGSMSGMSTVTGGMGMG
                     LDRMSSSFDRMGPGIGAILERSIDVDRGFLSGPMGSGMRDRLGSKGNQIFVRNLPFDL
                     TWQKLKEKFSQCGHVMFAEIKMENGKSKGCGTVRFESPESAEKACRIMNGIKISGREI
                     DVRLDRNA"
ORIGIN      
        1 gctctcgcga gatccgggcc gccgagcgct cggggccttt tcaaatcgcg atccgttacc
       61 gctccgccgg ccgtcgccat tgtagcgctc ggagccctaa gcgcggccga ggcggagccc
      121 gcggcgggat ggccgatgcc gacaagcccg aggcggccgc gggtgacgac ggcccgcagc
      181 agcaaccggc tgagccgcgg cgagacccgc accccggcga gccggagaaa ccgccgcgca
      241 gcagcgccaa cggcgttaaa atggagaatg atgaatcagt gaaggaagaa aaatctgatt
      301 taaaagaaaa gtctacagga aataagaagg ccaatcggtt tcatccttat tcaaaagata
      361 agaattcggg cactggagaa aagaaaggtc caaatcggaa cagagtgttc attagcaaca
      421 tcccctatga catgaaatgg caggctatta aagatttgat gagagaaaaa gttggtgagg
      481 ttacatacgt ggagctcttt aaggatgcgg aaggaaaatc aaggggttgt ggcgtggttg
      541 aattcaaaga tgaagaattt gtaaagaaag cattagaaac tatgaacaaa tatgacctta
      601 gtggaagacc tctgaatatt aaagaggatc ccgatggaga aaatgctcgc cgtgcactgc
      661 agcgaacagg aacatcattt caaggatcac atgcctctga tgtaggatct gggctggtga
      721 atttaccacc ttccattgtg aataatccaa acattcctcc tgaggttatc aacaacttgc
      781 aggctggtag acttggttcc acaatttttg ttgctaatct tgacttcaaa gttggttgga
      841 aaaaactaaa ggaagtgttc agcatagctg gaactgtgaa gcgagctgat attaaagaag
      901 acaaggacgg caagagcaga ggcatgggca cggtcacttt tgagcaggca atcgaagcag
      961 tccaagcaat ttccatgttc aatgggcagt ttttatttga tagacctatg catgtgaaaa
     1021 tggatgacaa atctgtccct catgaagact accgttcaca tgatagtaag acatcacaat
     1081 taccacgtgg tcttggaggc attggaatgg gactgggtcc aggtggacag ccaattagtg
     1141 ccagccagct gaacataact ggtgtaatgg gaaatttagg tccaagtggc gttgggtttg
     1201 gtggtctgga agcaatgaat agcatggcag gctttggtgg agttggccga atgggagagt
     1261 tgtaccgcgg tgcaatgact agtagcatgg agcgagattt cggacgtggt gatattggat
     1321 tgagtcgagg ctttggcgac tcctttggta gacttggcag tgcaatgatt ggagggtttg
     1381 caggaagaat aggagcttct aacatgggtc cagtaggaac tggaataagt ggcagcatga
     1441 gcggcatgag caccgtgacg ggaggcatgg gaatgggcct ggaccgcatg agctccagct
     1501 tcgacaggat ggggccaggc atcggagcca tactggaaag gagcattgac gtggaccgag
     1561 ggtttttatc gggtcccatg ggaagtggaa tgagagacag attaggctcc aagggcaacc
     1621 agatatttgt tagaaatctt ccttttgact tgacttggca gaaattaaaa gagaaattca
     1681 gccaatgtgg tcatgtaatg tttgcagaaa taaagatgga gaatggcaag tcaaaaggct
     1741 gtgggacagt caggtttgaa tccccagagt cagctgaaaa ggcctgcaga ataatgaacg
     1801 gcatcaagat cagtggcagg gaaatcgatg tgcgcttgga ccgtaatgca taatttcaag
     1861 catggttgga acattccctc atctgtttat tgactcctag taaaagtcat tttttagtaa
     1921 tgttgtatgc ttacaaatgc tgtaaaaaat gaacttttaa aactcccacc agcttttaac
     1981 agtataatgt tgaaaaacat actgtgattt tcgttctctc aagtttgagt ttctagaaac
     2041 agcacgtctg atcattcagt ttcaatggat ggacatacca tttgtaatga aataagccat
     2101 tttgttattt tcagtagtag agtttgtttg ttctagtttc tccaacatta ttttaagtta
     2161 acagatactt ttttttttct tttaaaatct ctgctttgta tttaattgtt aaagaaaggg
     2221 ctcagacaaa ttagggtgtg attttggttt ggtttaaatt acttttctct gcttataaag
     2281 gatagtaatt aagtgttaca ctctaaagtt gaagattttt tttttaattt gacctaaatg
     2341 aagacatgaa tttttttgcc cctctatcat tccagttgtt ccacataaca ttattaaaaa
     2401 tatcaaattc cacagcccct tactctgtta tttccaatga ttccaagttc atatagtact
     2461 gataaagtag caagtcctaa gtatgacact aggcagacca cccccaactt tcggtctagt
     2521 ttccagccgt taaaatgaac cgctaagaac agaagaaaga ttgaaatgtt gagagagatg
     2581 gttatataag tgagtccctt gctgttcact tctataggag cagatgcatt cgtaaatgca
     2641 gtcttaataa accagggaag accaaggcat agcatatcaa acacattgga tcccacgatg
     2701 ttagatatag ccatgtctcc tttacctgca gaagaatagc atgttgttaa aatgtgcaca
     2761 tcaacactat attttattaa taatcttcat aagaaaaaca ctggatactt ttgttggtta
     2821 gttttagaaa actgttgtta gagcaagagt cttattgaat ttgtatttcc ttgggttagt
     2881 attttaaagt cttaacattt atttaataat tgtctttatt tattaaacca tttttaataa
     2941 ggta
//
