LOCUS       NM_001395062            3596 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus myosin binding protein C2 (Mybpc2), mRNA.
ACCESSION   NM_001395062 XM_006229002
VERSION     NM_001395062.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3596)
  AUTHORS   Schiaffino,S. and Reggiani,C.
  TITLE     Molecular diversity of myofibrillar proteins: gene regulation and
            functional significance
  JOURNAL   Physiol Rev 76 (2), 371-423 (1996)
   PUBMED   8618961
  REMARK    Review article
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jun 1, 2021 this sequence version replaced XM_006229002.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643296.1298.1,
                                           SRR26643295.2075.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                JAXUCZ010000001.1  104154016-104154101 c
            87-170              JAXUCZ010000001.1  104152184-104152267 c
            171-257             JAXUCZ010000001.1  104151693-104151779 c
            258-406             JAXUCZ010000001.1  104151357-104151505 c
            407-524             JAXUCZ010000001.1  104151048-104151165 c
            525-573             JAXUCZ010000001.1  104149973-104150021 c
            574-633             JAXUCZ010000001.1  104149769-104149828 c
            634-827             JAXUCZ010000001.1  104145855-104146048 c
            828-960             JAXUCZ010000001.1  104145421-104145553 c
            961-1085            JAXUCZ010000001.1  104145181-104145305 c
            1086-1191           JAXUCZ010000001.1  104144846-104144951 c
            1192-1364           JAXUCZ010000001.1  104143765-104143937 c
            1365-1530           JAXUCZ010000001.1  104142635-104142800 c
            1531-1637           JAXUCZ010000001.1  104141253-104141359 c
            1638-1667           JAXUCZ010000001.1  104140882-104140911 c
            1668-1807           JAXUCZ010000001.1  104140609-104140748 c
            1808-1967           JAXUCZ010000001.1  104138437-104138596 c
            1968-2072           JAXUCZ010000001.1  104138240-104138344 c
            2073-2261           JAXUCZ010000001.1  104137642-104137830 c
            2262-2396           JAXUCZ010000001.1  104136941-104137075 c
            2397-2564           JAXUCZ010000001.1  104135714-104135881 c
            2565-2653           JAXUCZ010000001.1  104135490-104135578 c
            2654-2849           JAXUCZ010000001.1  104134865-104135060 c
            2850-2989           JAXUCZ010000001.1  104134340-104134479 c
            2990-3149           JAXUCZ010000001.1  104134002-104134161 c
            3150-3286           JAXUCZ010000001.1  104133780-104133916 c
            3287-3473           JAXUCZ010000001.1  104132350-104132536 c
            3474-3596           JAXUCZ010000001.1  104130642-104130764 c
FEATURES             Location/Qualifiers
     source          1..3596
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q22"
     gene            1..3596
                     /gene="Mybpc2"
                     /note="myosin binding protein C2"
                     /db_xref="GeneID:292879"
                     /db_xref="RGD:1311596"
     exon            1..86
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     CDS             68..3484
                     /gene="Mybpc2"
                     /note="myosin binding protein C, fast-type"
                     /codon_start=1
                     /product="myosin-binding protein C, fast-type"
                     /protein_id="NP_001381991.1"
                     /db_xref="GeneID:292879"
                     /db_xref="RGD:1311596"
                     /translation="MPEAKPAAKKAPKGKDAPKEAPAAKQTPPAEPPKEAPPEDQSPT
                     VEEPTGLFLKKPDSVSVETGKDTVILAKVNGKELPGKPSIKWFKGKWQELGSKSGARF
                     TFKESHDSASNVYTVELHIGKVVLGDRGDYRLEVKAKDVCDSCPFNVDVEAPRQDSSG
                     QSLESFKRSGDGKSEDAGELDFSGLLKKREVVEEEKKKKKDDDDLGIPPEIWELLKGA
                     KKSEYEKIAFQYGITDLRGMLKRLKKAKVEVKKSAAFTKKLDPAYQVDRGNKIKLVVE
                     ISDPDLPLKWFKNGQEIKPSSKYVFENVGKKRILTINKCTLADDAAYEVAVKDEKCFT
                     ELFVKEPPVLIVTPLEDQQVFVGDRVEMSVEVSEEGAQVMWMKDGVEMTREDSYKARY
                     RFKKDGKRHILIYSDVAQEDGGRYQVITNGGQCEAELIVEEKQLEVLQDIADLTVKAS
                     EQAVFKCEVSDEKVTGKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFV
                     PDGYALSLSAKLNFLEIKVEYVPKQEPPKIHLDCSGKTSDNSIVVVAGNKLRLDVAIT
                     GEPPPTATWLKGDEVFTVSEGRTRIEQRPDCSSFVIESAERSDEGRYTIKVTNPAGED
                     VASIFLRVVDVPDPPEAVRVTSVGEDWAILVWEPPKYDGGQPVTGYLMERKKKGSHRW
                     MKLNFEVFTDTTYESTKMIEGVLYEMRVFAVNAIGVSQPSMNTKPFMPIAPTSAPQHL
                     TVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVSANKEPVERCGFTVKDL
                     PTGARILFRVVGVNIAGRSEPATLLQPVTIREIVEQPKIRLPRHLRQTYIRKVGEALN
                     LVIPFQGKPRPQVVWTKGGAPLDTSRVNVRTSDFDTVFFVRQAARSDSGEYELSVQIE
                     NMKDTATIRIRVVEKAGPAENVMVKEVWGTNALVEWQPPKDDGNSEITGYFVQKADKK
                     TMEWFNVYEHNRHTSCTVSDLIVGNEYYFRVFSENICGLSDSPGVSKNTARILKTGIT
                     LKPMEYKEHDFRTAPKFLTPLMDRVVVAGYAAALNCAVRGHPKPKVVWMKNKMEIHED
                     PKFLITNYQGILTLNIRRPSPFDAGTYSCRAFNELGEALAECKLDVRVPQ"
     exon            87..170
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            171..257
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            258..406
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            407..524
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            525..573
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            574..633
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            634..827
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            828..960
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            961..1085
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1086..1191
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1192..1364
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1365..1530
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1531..1637
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1638..1667
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1668..1807
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1808..1967
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            1968..2072
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            2073..2261
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            2262..2396
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            2397..2564
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            2565..2653
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            2654..2849
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            2850..2989
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            2990..3149
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            3150..3286
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            3287..3473
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
     exon            3474..3596
                     /gene="Mybpc2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtccctgcta gggcctggct agagccactg cggtcccaag tcctaggagc ggaagaaggt
       61 cgccgacatg cctgaggcta aaccagcggc caaaaaggct cccaaaggca aggatgcccc
      121 gaaggaagcc cccgcagcaa agcagactcc tcctgcagag ccccccaaag aggccccacc
      181 ggaagaccaa tccccaactg tggaggagcc tacaggcctc ttcctgaaaa agccggattc
      241 tgtgtcagtg gagactggga aggacacagt gattctggcc aaggtgaacg gaaaggagct
      301 cccaggcaag cccagcatca agtggttcaa ggggaagtgg caggagctgg gtagcaagag
      361 cggagcccgg ttcaccttca aggaatccca tgactcagcc agcaatgtgt acaccgtgga
      421 gctccacatt gggaaggtgg tcctagggga ccgcggggat taccgtctag aggtcaaagc
      481 caaggatgtc tgcgacagct gcccgttcaa cgtggatgtg gaggcacccc gtcaggactc
      541 atccggtcag agccttgaga gcttcaagcg ttcgggtgac gggaagtcag aagatgcagg
      601 tgaactggat ttcagtggct tgctgaagaa gagggaagta gttgaggagg aaaagaagaa
      661 gaagaaagat gatgatgatc tgggcatacc cccggagatt tgggagctcc tgaaaggggc
      721 caagaagagc gagtatgaga agattgcctt ccagtatggc atcactgacc ttcgtggcat
      781 gctgaagcgg ctcaagaagg ccaaggtgga ggtcaagaag agtgcagcct tcactaagaa
      841 gttggaccca gcctaccaag tagacagggg caacaagatc aagttggtgg tggagatcag
      901 tgacccagac cttcctctca agtggttcaa gaatggccag gagatcaagc caagcagcaa
      961 gtatgtgttt gagaatgtgg ggaagaaacg aattcttacg atcaacaagt gcacgctggc
     1021 agatgatgct gcatatgagg tggcagtcaa agatgagaag tgcttcactg aactctttgt
     1081 caaagagcct ccagtcctga ttgtcacccc actggaggac cagcaggtgt ttgtgggtga
     1141 ccgagtggaa atgtcagtag aggtatctga agagggtgca caggtcatgt ggatgaaaga
     1201 tggtgtggag atgacgcggg aggattccta caaggcacgc taccgcttca agaaggacgg
     1261 gaagcggcac atcctcatct actctgatgt ggcccaggag gatgggggac gctatcaggt
     1321 cataaccaat ggtggccagt gtgaggctga actcattgtg gaagagaagc aactggaggt
     1381 cctgcaggac attgcggacc tgacggtgaa ggcctcagaa caggccgtgt tcaagtgtga
     1441 agtgtctgat gagaaggtaa cgggcaagtg gtacaagaac ggggtggagg tacggcccag
     1501 caagaggatc accatctccc atgtgggcag attccacaag ctggtgatcg atgatgtccg
     1561 ccccgaggat gagggagact acacattcgt gcctgatggc tatgccctat ccctctcagc
     1621 caagctcaac tttttggaaa tcaaagtgga gtatgtacct aagcaagagc ccccaaagat
     1681 ccacctggat tgctcaggga agacctcaga taactcaatt gtcgtggtgg ctggaaacaa
     1741 gctgcgactg gatgtggcca tcacagggga gccacctccc actgctacct ggctaaaggg
     1801 agatgaggtg ttcacagtct cagaaggcag gacacgcatt gagcagaggc cagactgcag
     1861 cagctttgtg atcgagagtg cagaacggtc agatgagggc cgttacacca tcaaagtcac
     1921 taatcctgcg ggcgaggacg tggcctccat tttccttcga gttgtggatg ttcctgaccc
     1981 tccagaggct gtccgtgtca cctcagttgg agaagactgg gccattctgg tctgggagcc
     2041 acccaagtat gatggaggac agccagtaac tgggtacttg atggagcgga agaagaaagg
     2101 ctcccaccgc tggatgaagc tcaactttga ggtcttcact gacacaacct acgagtcaac
     2161 aaagatgatc gagggtgtcc tctatgagat gcgagtcttt gctgtcaacg ccattggtgt
     2221 ctcacagccc agcatgaaca ccaagccctt catgcccatt gcccccacga gtgcaccaca
     2281 acacctcaca gtggaggatg tgacagacac caccactaca ctcaagtggc ggcctccaga
     2341 tcggattggc gctggcggca ttgacggcta cctcgtggag tactgcctgg agggctctga
     2401 ggaatgggtc tcagctaaca aggaaccagt ggaacggtgt ggcttcactg tcaaggatct
     2461 cccaactgga gccaggattc tcttccgggt tgttggggtc aacattgcgg ggcgcagtga
     2521 accagccacc ctccttcagc cggtcactat cagggagatt gttgagcaac ccaagatccg
     2581 cctcccccgc catctgcgtc agacttacat acgaaaggtt ggggaagccc tcaacctcgt
     2641 catccccttc cagggcaagc cccggcctca ggtggtgtgg accaagggtg gggctccctt
     2701 ggatacctcc cgtgtgaatg tgcggactag tgatttcgac acagtgttct tcgtgcgcca
     2761 ggcggcccgc tctgactcgg gagagtatga gctgagtgtg cagattgaga acatgaagga
     2821 cactgccacc atccgtatcc gggtcgtgga gaaggcaggg ccagcagaga atgtgatggt
     2881 gaaggaggtg tggggcacga atgcactggt ggagtggcag ccgcccaagg acgacgggaa
     2941 cagtgagatc acaggctact ttgtccagaa ggctgacaaa aagaccatgg agtggttcaa
     3001 tgtctacgag cacaatcgcc acaccagctg tacggtgtct gacctcattg tgggtaatga
     3061 gtactacttc cgtgtcttca gcgagaacat ctgtggcctc agtgactcgc caggtgtctc
     3121 caagaacaca gctcggatcc tcaagacagg aatcacctta aaacccatgg aatacaaaga
     3181 gcatgatttc cggacagccc ctaagttcct gacccccctg atggaccggg tagtggtggc
     3241 aggatatgcc gcagctctca actgtgcagt cagaggccac cctaagccca aggtggtgtg
     3301 gatgaagaac aagatggaga tccacgaaga tcccaaattc ctcataacca actaccaggg
     3361 catcctgacc ctgaacattc gccgaccttc acccttcgat gcagggacct attcctgccg
     3421 tgccttcaat gaacttgggg aggccctggc tgaatgcaaa ctggatgtcc gagtgccaca
     3481 gtgacagctc atcacctgtt aagtcatcag aacctggaca ccagtcctgg aacccttggg
     3541 atgacagtca tctttctaga atgatcattg tgataaagta ctgttgctca aattat
//
