LOCUS       XM_039098940            4097 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MYB proto-oncogene, transcription
            factor (Myb), transcript variant X1, mRNA.
ACCESSION   XM_039098940
VERSION     XM_039098940.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Jan 22, 2024 this sequence was replaced by
            NM_001427409.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4097
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4097
                     /gene="Myb"
                     /note="MYB proto-oncogene, transcription factor; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     32 samples with support for all annotated introns"
                     /db_xref="GeneID:498982"
                     /db_xref="RGD:1560020"
     CDS             593..2836
                     /gene="Myb"
                     /codon_start=1
                     /product="transcriptional activator Myb isoform X1"
                     /protein_id="XP_038954868.1"
                     /db_xref="GeneID:498982"
                     /db_xref="RGD:1560020"
                     /translation="MARRPRHSIYSSDEDDEDIEMCDHDYDGLLPKSGKRHLGKTRWT
                     REEDEKLKKLVEQNGTDDWKVIANYLPNRTDVQCQHRWQKVLNPELIKGPWTKEEDQR
                     VIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEDEDRIIYQAHK
                     RLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEGYLQEPSKASQTPVVSSFQKNN
                     HLMGFAHASPPPTSQSSVNGEYPYYHIAEAQNISSHVPYPVALHVNIVNVPQPAAAAI
                     QRHYNDEDPEKEKRIKELELLLMSTENELKGQQALPTQNHTCSYPGWHSTSIVDQTRP
                     HGDSAPVSCLGENHATPSLPADPGSLPEESASPARCMIVHQGTILDNVKNLLEFAETL
                     QFIDSDSSRCDLSSFEFSEEAAAFSPSQQHTGKTFQLQEREGHGTRSAGEPSLRVTRR
                     VLSEASLRQAKASPLVFLRKRRGQASPTAAGDSSSSLFADVSSSTPKRSPVKSLPFSP
                     SQFLNTSSNHENSGLDTPTLPSTPLIGHKLTPCHRDQTVKTQKENSIFRTPAIKRSIL
                     ESSPRTPTPFKHALAAQEIKYGPLKMLPQTPSHVVEDLQDVIKQESDESGIVAEFHEN
                     GPPLLKKIKQEVDSPTEKAGNFFCSNHWEETNLSTQLFAQASPVADAPNILTSSVLMT
                     PVSEDEDNVLKAFTVPKNRPLVGPLQPCVGAWEPTPSCGKTEDQMTASGQARKYVNTF
                     SARTLVM"
ORIGIN      
        1 tcgggctcgg gagcccggga gcctacggag aggagcgacc gcgtttcggc tgcagtaagc
       61 ggcaacagcc ggaccccgtg tgaccggcgc cacccgggcc aaggagcggg atttgctccg
      121 gaaaaggcgc cgccgcggcc ggggccgccc ctccccagcc cgggctcccg gcccgcccgc
      181 cgtcccggcc tcgctgcgcg ccaggagcag ctcggcggcg cgagaggcga ctgggagcgg
      241 cggccaggcg ggctgcagct cgggcgaccg cggaggcggc gggcagggcg cgtgcgcact
      301 gcaggggcgc cagatttggc gggaggggga gtgtccaaac ctctttgttt gatggcatct
      361 gtttacagag ttacacttta atatcaacct gtttcctcct cctccttctc ctccttctcc
      421 tcctcctcct ccgtgacctc cttctcctcc cctttctccg gagaaacttc gccccggtgg
      481 tgcggagcgc cgctgcgcag ccgggggagg acgcaagcaa ggcggagggc agcaggaggc
      541 ggcaaccggt gcggtccccg gggctcttgg cggagccccg gcccgcctcg ccatggcccg
      601 gagaccccgg cacagcatat acagcagcga tgaagatgat gaagacattg agatgtgtga
      661 ccatgactac gatgggctgc ttcccaaatc tggaaaacgt cacttgggga aaactaggtg
      721 gaccagggaa gaggatgaaa agctgaagaa actggtggag cagaatggaa cagacgactg
      781 gaaagtcatt gccaattatc tgcctaaccg gacagatgtc cagtgccaac accggtggca
      841 gaaagtgctg aaccctgagc tcatcaaagg tccctggacc aaagaagaag atcaaagagt
      901 gatagagctt gtccagaaat acggtccgaa gcgctggtct gttattgcca agcacttaaa
      961 agggagaatt ggaaaacaat gtcgggagag gtggcacaac catttgaatc cagaagttaa
     1021 gaaaacctca tggacagaag acgaagacag aatcatttat caggcacaca agagactggg
     1081 aaacagatgg gcagaaatcg caaaactgct gccaggacgg actgataatg ctatcaagaa
     1141 ccactggaat tccaccatgc gtcgcaaggt ggaacaggaa ggctacctgc aggagccttc
     1201 caaagccagc cagacaccgg tggtctctag cttccagaag aacaatcatt tgatgggctt
     1261 tgctcatgcc tcacctcctc caactagcca gtcctcagtc aacggcgaat atccctatta
     1321 tcacatcgct gaggcacaaa acatctccag tcacgttcca taccctgtcg cgttgcatgt
     1381 aaatatcgtc aatgtccctc agccagctgc tgcagccatc cagagacatt ataacgatga
     1441 agatcctgag aaggaaaagc gaataaagga attggagttg ctcctgatgt caacagagaa
     1501 cgaactgaag ggacagcagg cattaccaac acagaaccat acttgcagct atcccgggtg
     1561 gcacagcacc tccattgtgg accagaccag acctcatgga gacagtgcac ctgtttcctg
     1621 tttgggagaa aaccatgcca ctccgtctct gcctgcagat cctggctctc tacctgaaga
     1681 aagtgcctcg ccagcaaggt gcatgatcgt ccaccagggc accattctcg acaatgttaa
     1741 gaacctctta gaatttgcag aaacactcca gtttatagat tctgattctt cacggtgtga
     1801 tctcagcagt tttgaattct ctgaagaagc ggcagctttt tcacctagcc agcagcacac
     1861 aggcaaaacc ttccagcttc aggaaagaga gggccatggg actagatctg ctggagagcc
     1921 tagcctgagg gtcacccggc gagtgctgag cgaggcttcc ctccgccaag ccaaagcctc
     1981 accgctggtc tttcttcgaa aaaggcgggg gcaggccagc cccacagccg ctggagactc
     2041 tagctcctcc ctctttgctg acgtcagcag ctcgactccc aagcgttccc ctgtcaaaag
     2101 cctacccttc tctccctcgc agttcttgaa cacttccagc aaccatgaaa actcgggctt
     2161 agatacgcct actttaccct ccacgcctct cattggtcac aaactgacac cgtgtcaccg
     2221 agaccagact gtgaaaactc aaaaggaaaa ctccatcttt agaactccag ctatcaaaag
     2281 gtcaatcctc gaaagctctc ccagaactcc cacaccattc aaacatgccc tggcagctca
     2341 agaaattaaa tacggtcccc tgaagatgct acctcagacc ccctctcatg tagtggaaga
     2401 cctacaagat gtgatcaagc aggaatctga tgaatccgga attgttgctg agtttcatga
     2461 gaatggacca ccgttactga agaaaatcaa gcaggaggtg gactcaccca ctgagaaagc
     2521 gggaaatttc ttctgctcaa accactggga agagaccaat ctgagcaccc agctgttcgc
     2581 tcaggcgtct cctgtggcag atgccccaaa tattcttacg agctctgttt taatgacacc
     2641 cgtatcagaa gatgaagaca acgttctcaa agcctttacc gtacctaaaa acaggcccct
     2701 ggtgggtccc ttgcagccct gcgttggagc ctgggaacca acaccatcct gtgggaagac
     2761 agaggaccag atgacggcct ccggtcaggc tcggaaatac gtgaacacgt tctcagctcg
     2821 gactctggtc atgtgagaca tttccagaaa agcattatgg ttttcagaac actcaaagtt
     2881 gacttttgac tatcattctt cagcatggag ccctccgtga ctgaggggag attctatttt
     2941 tttgttgtgg tacaacagtt gagagaagca ccaagtgcgt tttagtcgcg cgaaatctga
     3001 ctggatttca cccgactaaa aaggattttt aaaaaaaaaa aatttatgaa taacagtctt
     3061 acctaaatta ttaggtagtg gattgtaacc acttgttaat atcataatca gattttttaa
     3121 aaaagaaatg atttatttgt atttagaaga tccaacagat cagtattttt gactgtggtg
     3181 aatttttaaa aaaaaaaaat ttacaaaaag aaaatcccag tattccatgt atctcaatca
     3241 ctaaacacac gcagagatat tttttaaaaa ccagtaaaag cattattatg aatgttagct
     3301 aaataccaag taatacttaa cagaacctat aagaactcat ttgtggttaa taattcggga
     3361 aatacattta ttgtactaaa ccatctcatg aggagaattt tgttgttagc ttgcttgaaa
     3421 aattattact gtatgaaata gttttattaa aagattatat ttttattcag taatttaatt
     3481 ttgtaaatgc caaatggaaa aaaaaatgtg tttcgctgct atggttttag cctgtagaca
     3541 tgctgctagt gtcaaaaggt tggtagagct tagatgaaaa aaaagaaaga aaaagaaact
     3601 tggtgttaga taatggacta tgcactagta ttccagactt ttttattttt ataaatatat
     3661 atatatatat atatatatac ctttttcctt ttgtaattgg aaaacttatt tgggagaatt
     3721 ttgcatttgt tgtacatttt cgttttttag aaaaaaaatt ttttttttgt tactgtcagt
     3781 ttataaaagc attgcacttc ttttcctttt tctttgggag attttgtgtt gtttatgtcg
     3841 aatgttgtgt tttgagttcg gcctgaatgt ccgtccgttt gggcactttc tgagtttgat
     3901 cagcattccc tgtagatttc taagtgtatg gctctggaac tgccccgtgg ctcctgttta
     3961 caggaaagac tgcgcgtgga agtcaatagc cagtttctgc cttgaggaca tttgcaagaa
     4021 ggctggcctt gaacttctga aaatgacggt gtacctactg ccttgtagga aaataaagct
     4081 atccccttat ttacgta
//
