LOCUS       XM_006248146            3262 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus MX dynamin like GTPase 1 (Mx1),
            transcript variant X2, mRNA.
ACCESSION   XM_006248146
VERSION     XM_006248146.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051346.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006248146.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006248146.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3262
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3262
                     /gene="Mx1"
                     /gene_synonym="IFI78"
                     /note="MX dynamin like GTPase 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     mRNAs, 117 ESTs, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     46 samples with support for all annotated introns"
                     /db_xref="GeneID:24575"
                     /db_xref="RGD:3127"
     CDS             262..2220
                     /gene="Mx1"
                     /gene_synonym="IFI78"
                     /codon_start=1
                     /product="interferon-induced GTP-binding protein Mx1
                     isoform X1"
                     /protein_id="XP_006248208.1"
                     /db_xref="GeneID:24575"
                     /db_xref="RGD:3127"
                     /translation="MKEQTSACRHQTPQKHPDTSEESQAMESVDNLCSQYEEKVRPCI
                     DLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLVLKL
                     KQLKQGEKWSGKVIYKDTEIEISHPSLVEREINKAQNLIAGEGLKISSDLISLEVSSP
                     HVPDLTLIDLPGITRVAVGDQPADIEHKIKRLITEYIQKQETINLVVVPSNVDIATTE
                     ALKMAQEVDPQGDRTIGILTKPDLVDRGTEDKVVDVVRNLVCHLKKGYMIVKCRGQQD
                     IQEQLSLAEALQKEQVFFKEHPQFRVLLEDGKATVPCLAKRLTMELTSHICKSLPILE
                     NQINVNHQIASEELQKYGADIPEDDSKRLSFLMNKINVFNKDILSLVQAQENISWEES
                     RLFTKLRNEFLAWNDYIEEHFKKTLGSSEKHSQMEKFESHYRGRELPGFVDYKAFENI
                     IKKEVKALEEPALNMLHRVTTMVKNAFTKVSSNNFGDFLNLHSTAKSKIEDIRFSQEK
                     EAEKLIRLHFQMEHIVYCQDQAYKKALKEIREKEAEKEKSTFGVFQQNSPRKELTTTE
                     MTQHLNAYYQECGRNIGRQIPLIIQYSILQTFGQEMEKAMLQLLQDTSKCNWFLTEQS
                     DSREKKKFLKRRLLRLDEAQRKLAKFSN"
ORIGIN      
        1 cttcccccgc tggtcagggg gcggagccag cactgtttaa agagctctga gctctggcag
       61 ctgcacactc agtcaccaac ccaggagctg tgagtattgc actggattct gtgggaggat
      121 agaggatacc ttgtaaggct cctttgcaga cattgtgcct gaccccagtg gcaaggcttc
      181 cagattcttc tgaatcaaac cctttatgtc caaccgaatc cacctggaaa acacgcaaga
      241 gtgagttcct agaacgtcaa aatgaaggag cagacctctg catgccgtca ccagacacca
      301 cagaaacatc ctgatacctc tgaagagagc caggcaatgg agtctgtgga taacctctgc
      361 agtcagtatg aggagaaggt gcggccctgc attgacctca tcgactccct gcgagctctg
      421 ggtgtggagc aagacctggc cctgcctgcc atcgctgtca tcggggacca gagttcaggg
      481 aagagctctg tgctggaagc actgtctgga gtggccctcc ccagaggcag tggtattgtt
      541 accaggtgtc ctctggtgct gaaattgaag caactgaagc agggagaaaa atggagcggc
      601 aaggtcattt ataaggacac cgagattgag atctcacacc cttcactggt agaaagggaa
      661 atcaataaag cccagaactt gattgctggg gaagggttga agattagctc tgatctcatt
      721 agcttggagg ttagctctcc acatgtccca gacctgactc tgattgacct tcctggtatc
      781 acaagagtgg ctgtgggtga ccagcctgca gacatcgaac acaagatcaa gagacttatc
      841 actgaataca tccagaaaca ggagaccatc aacctggtgg tggtccccag caatgtggac
      901 attgccacca cagaggccct gaaaatggct caggaggtgg accctcaagg ggatagaacc
      961 atagggatct tgaccaagcc cgatctggtg gacagaggga ctgaagacaa ggtcgtggat
     1021 gtggtgcgga acctcgtgtg ccacctgaag aagggctaca tgatagtcaa gtgcaggggt
     1081 cagcaggaca tccaggagca gctgagcctg gctgaggctc ttcagaagga gcaagtcttc
     1141 ttcaaggaac accctcaatt cagagttctt ctcgaggatg ggaaggccac agtgccctgc
     1201 ttggcaaaga gactgaccat ggagctcacc tcccacatct gtaaatcgct gccaatattg
     1261 gaaaatcaaa taaatgtgaa tcatcagatt gcgagtgagg agctgcagaa gtacggagca
     1321 gacataccag aagatgacag taagaggctg tcctttctga tgaataaaat caatgtcttc
     1381 aataaggata tcctaagttt ggtacaagca caagaaaaca tatcatggga agaaagccgg
     1441 ctgttcacca aactgcgaaa tgagtttctt gcttggaatg attatattga ggaacatttc
     1501 aaaaaaaccc taggttcttc tgagaaacac agccagatgg aaaaatttga aagtcattat
     1561 cgtggccggg aactgccagg gtttgtggac tataaggcat ttgagaacat tatcaagaag
     1621 gaagtcaagg ccctggaaga acccgctctg aacatgctgc acagggtcac taccatggtc
     1681 aaaaatgcct tcacaaaggt ttcatcaaac aattttggtg attttttaaa cctccacagt
     1741 actgccaagt ccaaaattga agacatcaga tttagccaag aaaaagaagc cgaaaaactg
     1801 atccgacttc acttccagat ggaacacatt gtctactgcc aggaccaggc ttacaagaaa
     1861 gccttgaagg agatcagaga gaaggaagct gagaaagaga agtcaacctt tggtgtcttt
     1921 caacaaaact ctcctcgaaa ggagttgact accactgaga tgacccagca cctgaatgcc
     1981 tactaccagg agtgcggaag gaacattggg agacagatcc ctctgatcat ccagtactcc
     2041 atcctgcaaa catttgggca ggaaatggag aaagcaatgc ttcagcttct acaggacacc
     2101 agtaagtgca actggttcct gactgagcag agtgacagca gagagaagaa gaagttcctg
     2161 aagaggcggc ttttaaggct ggatgaggct cagcggaagc ttgccaaatt ctccaattaa
     2221 tcaggcttgc tatgtgactt ccctggtcac agctagcgtc ccctgcacaa tgacccttta
     2281 gctgtttacc ttatgttagt atgttgcctt tagactgtgg aagcatgccc tctgcaaact
     2341 ctgaggagac gaagagagga gccatggaga gtcattctac ttcagcagta agacacgacc
     2401 ctctcaaagc acaggaggct ggcacctctc agggtccttc ctgctcctaa ctgccatttc
     2461 tttgtcagga ggatgtcctg gctgagtact tcagaaggga tgtctcctgg ctttgtactg
     2521 ctctgcctgg agtagtgcta gaggtgtgac agagtcctag caggacagct ctttgtaggc
     2581 ataaattttt tgcaacctaa ttttagcaag ggttcaacct cacttttagc ccaccaccca
     2641 tcagaggtag tgggacagaa aagttattag gatatggggg aagtgctcag caatagttct
     2701 ttgggggtga gctcaacttt ctttggcagc ataacaaaca ccaaataaga ctcagaagtt
     2761 gcagatcagt cctctaggca ggcagacacc aggcacgaac cagcagctgt agatcaatct
     2821 taaagaaagc tcgccagcca gcctgaggta aggctgtgga agcagcaaac ttcctcagca
     2881 acctcacaag tagttcttag gcaagtttct tctaatggta gtgttaccac aagttgagcc
     2941 caacaatgct atgcaaggca aaccattaca tgcacgttgt tagtgaagaa taagtaggca
     3001 gagcaaacca acgctcagtt gctcgtctcc cagtgttttg tggggccgta tttatctcct
     3061 tcatcatggg tcctttcaca tgtttgcaat attaaatcat cctttcacct gtgtccgctt
     3121 caggacaaca gtctttcaca agtttgcttc agcaagacac cctttcacct gtgtgcccca
     3181 gcaaaacatc atttgacata actttctaaa gaaactagaa gtttccactt caagttcttc
     3241 caataaaatt cttgctaaat ga
//
