LOCUS       XM_039110252            1004 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus major urinary protein 4 (Mup4),
            transcript variant X1, mRNA.
ACCESSION   XM_039110252
VERSION     XM_039110252.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1004
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1004
                     /gene="Mup4"
                     /note="major urinary protein 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 37
                     Proteins, and 43% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:362527"
                     /db_xref="RGD:735211"
     CDS             137..826
                     /gene="Mup4"
                     /codon_start=1
                     /product="major urinary protein 4 isoform X1"
                     /protein_id="XP_038966180.1"
                     /db_xref="GeneID:362527"
                     /db_xref="RGD:735211"
                     /translation="MKLLLLLLCLGLTLVCGHAEEASSVRGNLDVDKLNGDWFSIVLA
                     SDKREKIEENGSMRVFMQHIDVLENSLGFKFHIKKNGECREVYLVAYKTPKDGEYFVE
                     HDGGNTFTILKTDYDRYVMIHLVNVKNGETFQLMLLYGRTKDLSSDIKEKFEKLCVAH
                     GITRDNIIDLTKTVELVPEHVLVLTLQIAVSRPEVEERPEPPVLSGDFSPGHQHHHFL
                     SMEYPETNSAI"
ORIGIN      
        1 aggcccatat gagaaggaaa aaaaaacact caaacccaga gagagtataa agacgagcaa
       61 agtgctggag gtggagtgtg ggcaccatca gcagagggat tgtcccgaca gagaggcaat
      121 tctattccct accaacatga agctgttgct gctgctgctg tgtctgggcc tgaccctggt
      181 ctgcggccat gcagaagaag ctagttctgt gagagggaac ctcgatgtgg acaagctcaa
      241 tggggattgg ttttctattg ttctcgcctc tgacaaaaga gaaaagatag aagagaacgg
      301 cagcatgaga gtttttatgc agcacatcga tgtcttggag aattccttag gcttcaagtt
      361 ccatattaag aaaaatggag agtgcaggga agtatatttg gttgcctaca aaacgccaaa
      421 ggatggcgaa tattttgttg agcatgacgg agggaataca tttactatac ttaagacaga
      481 ctatgacaga tatgtcatga ttcaccttgt taatgtcaag aacggggaaa ctttccagtt
      541 gatgttgctc tacggcagaa caaaggatct gagttcagac atcaaggaaa agtttgaaaa
      601 actatgtgtg gcacatggaa taactaggga caatatcatt gacctaacca agactgtgga
      661 actggtacct gaacacgttc ttgttctcac cctgcagatc gctgtctcaa ggcccgaggt
      721 tgaagaaagg cctgagcctc cagtgctgag tggagacttc tcaccaggac accagcatca
      781 ccatttcctg tccatggagt atcctgagac aaattctgcg atctgatttc cattctgttt
      841 cacagaaaag tgcaatcctg gtctctccag catcttccct agttacccag gacaacacat
      901 cgagaattaa aagctttctt aaatttctct ttgacccacc catgatcatt ccgcacaaat
      961 ttcttgctct tgcagttcaa taaatgatta cccttgcact taaa
//
