LOCUS       XM_039080631             625 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mucin-like 1 (Mucl1), mRNA.
ACCESSION   XM_039080631
VERSION     XM_039080631.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039080631.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..625
                     /gene="Mucl1"
                     /note="mucin-like 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 3 ESTs, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:100912361"
                     /db_xref="RGD:1596126"
     CDS             77..490
                     /gene="Mucl1"
                     /codon_start=1
                     /product="mucin-like protein 2"
                     /protein_id="XP_038936559.1"
                     /db_xref="GeneID:100912361"
                     /db_xref="RGD:1596126"
                     /translation="MKFLALLVLLGVSTILVSCQDAGTDTADTSDTADGTTDSGTQAD
                     ATDGQQDAESSDGTNDGTEGTSDGGDGDAPADQDQEQTDDENTTADESSDDDDVEEEG
                     DDDDEEEEKEEDKKPNPILALIELAKKLKEKYKLG"
ORIGIN      
        1 ccggtatcga cagtcttcct tgtctccaag tattggagcc tgaccttctg tgtctgctgc
       61 tcttctactt gtcaccatga agttcctggc actcctggtg ttgcttggtg tttccactat
      121 tctagtctct tgccaggacg cagggacaga cactgctgac acttctgata ctgctgatgg
      181 aaccactgac tctggaactc aggcagacgc tactgatgga cagcaagatg ctgagtcctc
      241 tgatggaacc aacgatggta ctgagggcac tagtgatggc ggtgatggtg atgcgcctgc
      301 tgaccaggat caggaacaga cagatgatga gaacactact gcagatgaat cctccgatga
      361 tgatgatgtc gaggaagaag gggatgatga tgacgaggaa gaagagaaag aagaggacaa
      421 aaagcccaac ccaatactcg cattgattga attggctaag aaactgaaag aaaaatataa
      481 gttgggataa gttttgatct tcctggacca gattaaaaca tccttgaatt gatttcctgc
      541 aattatttac cctgactatt ctctctccct cctctctaac ttttatcttc tatgaaataa
      601 acgatagtca caagcagcat caaaa
//
