LOCUS       XP_038938731            7226 aa            linear   ROD 11-JUN-2023
DEFINITION  mucin-16 [Rattus norvegicus].
ACCESSION   XP_038938731
VERSION     XP_038938731.1
DBLINK      BioProject: PRJNA677964
DBSOURCE    REFSEQ: accession XM_039082803.1
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..7226
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     Protein         1..7226
                     /product="mucin-16"
                     /calculated_mol_wt=777782
     CDS             1..7226
                     /gene="Muc16"
                     /coded_by="XM_039082803.1:1..21681"
                     /db_xref="GeneID:315451"
                     /db_xref="RGD:1308422"
ORIGIN      
        1 msqltdltte eavkaettat alkvtsifns ntkmstansr psthlktsek ttnintaemi
       61 itasdtsqnl leiapsfstg lrentsmisr rssppysrep eitipyitsl ktktipnvyt
      121 ltapssesdt iswithdlei tsavaktttn asqvesdsmv siatnprgeh ssnistaavf
      181 paipdlasie qvsrlfdpti aisssisemk nvdshssked trtskpiltn spsepyntis
      241 lisyaggktg spmstitvsp dvreimrplf pssgntnhtr nqpisqgqsk tttswithpg
      301 tevtsrvltt tispniqemv tsksvnptak lqtttsliid geehpslats travplgvie
      361 emppplinms teknartstl dfflyqpett tswttnpeke tilgihttny spsvtdrmts
      421 inlnytpsep esiksldihv egnpstsmsi qtvlpsirem misqatnygr ekhistsalp
      481 vslgqrqtta slvnhaenea tsealpttis tiqgmssttr mtsephttas lvthngeqhs
      541 sdmstlpass gitkmkqple tstgkenqsv ftilavslgv pktksintts nildmiiska
      601 qnhtssdght itslvthagt qsslsmstea psssitklta slftdmgked vaitslpiss
      661 gemgrrapsv tkpekevtse dqsitisnsi qqimtsptvi ptephtivlv dthfgdqpss
      721 amstlpvtsd ltkiipslst rpgteshsvt stmgisegql etttlgdtht gregnsltls
      781 avistsapdi misttknett sdtqtitsli tlveehhsls vptqgdspgi mketsslftd
      841 lgtesytmts tlpvfsgqpn irktwvkhse tevtagilpt tiltsipeim asptsllsep
      901 httvslishv ggepslamst lpvsgtlten ipsevnypgi eghsmtsald gtrdhidstd
      961 qwvshhskeg tsmvlyttis tsapdmvvsi nknqissdth tvtsfitqak gqpslsgstq
     1021 dispaikevp qsifndsdte syavtstlpa sshepetrtk wipntkmedk lgvlsttiss
     1081 stpemmispt pitseihstv slfthvgeqd niamssltvs psitkftatq qthtdtesht
     1141 etsalnvstg qaestttwlt qsakkettqv lsttsptvsd vmtsatlyst spgtqtitsf
     1201 isndgeqssl ptstqgispg itkgipslft nlntesysmt stmpvysgqp dtmtlwdtns
     1261 ekevtagdla ttisssvlem ktskttflte shttipsish vveqhnpvms tlpvstgike
     1321 iipsqgthsd tenhsltsal nvsagqaest ttwltqtakr etsgvlsrtm sptvpdmmts
     1381 aplnntspst qtitsfishd geqpslsmst qdisagmteg tpslftalnt ksnamtsnmp
     1441 assgqtesrt pwdtnsemka tsgtlsntis ynvpemkilp tvlpsetysa kvplvtevvg
     1501 qhssvmstlp fspgrtesip slettsgten ysvtstldms idqagsttpw gthtgrknnl
     1561 vgtstiistt alemmtsisk nqassetqti tsfinhaagq pslsgstqgi ssgikemtps
     1621 lftdldtdsn vmtstmpass gqaetrtplg ttsemkvtsg tlsttisytv pqmmasatfl
     1681 psephttvpl vthvvgqpss vmstlpfspg rtesipslei ssqienysvt stldmsidqa
     1741 gsttpwatht ekegtsgtps siistsapdr mtsitknqts setqtissli shdegqhnfs
     1801 vyshnispgi revtqslftd lgknsyamns tlpasssqae irtpwdsnte mkdtsgtlst
     1861 tisytlpqvm tsvtvipsep qtatvslvth avgqpssvms tlsfspgrte sqsslvissd
     1921 ienysvistl dmsidegstt pwgthtgreg tsgtpssiis tsvtemmpsi tknqtssktq
     1981 titsfishdd gqpsisvstk gispgieett pslftdlgpd snvmtsampa ssgqaesrtp
     2041 wdttsemkst sgtlsttish tvpemmtsat fppsethitn pividivgqp ssvkstlpss
     2101 psrtesmpsm dtsshtenys vtstfdksid qagstnpwnt htdkgstsgt lssiistsap
     2161 emmssitkdq tssetqtits fishddgqps isvsnkgisp gieetisslf tdlgpdsnvm
     2221 tsampassgq aesrtpwdtt semkstsgtl sttishtvpe kmtsatfpps ethitnpivi
     2281 divgqpssvk stlpfspsrt esmpsmdtss htenysvtst fdksidqags tnpwnthtgk
     2341 gstsgtlssi istsapemms sipknqtssa tqsittfish ddeqpslsms tqgispgtkq
     2401 mtpspftdlg pgsyamastl passvlaetr tpwdttsemk gtsgtlsttv sysvpemtts
     2461 atflpsepht tipivthvvg qpssvmstlp lspsrtesmp smdtsshten ysmtstldms
     2521 idqagstnpw nthtdkests gtlpsiists apemmssipk nqtssatqti tsfishddgq
     2581 sslsvstkgi spgikemtps sftdlgpgsy amastllafs gqaetrtpwd ttsekkstsg
     2641 tlsttisytv pemvtsatfl psethttipi vthvvgqpss vmstlplsps rtesmpsmdt
     2701 sshtenysmt stldmsidqa gstnpwntht dkestsgtlp siistsapem mssipknqts
     2761 satqtitsfi shddgqssls vstkgispgi kemtpssftd lgpgsyamas tllassgqve
     2821 artpwdttse mkstygtlft tvsysvpemt tsatflpsep httipivthv vgqpssvmst
     2881 lplspsrtes mpsmdtssht enysmtstld msidqagstn pwnthtdkes tsgtlpsiis
     2941 tsapemmssi pknqtssatq titsfishdd gqsslsvstk gispgikemt pssftdlgpg
     3001 syamastlla fsgqaetrtp wdttsekkst sgtlsttisy tvpemvtsat flpsethtti
     3061 pivthlvgqp ssvmstlpls psrtesmpsl dtsshtenys vtstldmsid qagsttawai
     3121 htekestsgt pstiistsap drmtsttknq tssetqtiss fishdegqps lsmstpsisp
     3181 lmtevtqslf tdlgtdsyam tstlptssgq ahssppwdtn semkttsatl sttilstlpe
     3241 mmtsaslips ephstvplft hvegqpssvl stllispgit evmsslvtss atetnsvtyn
     3301 mdisteqpgf ttpwgthsgk estsrtlsti istsapdrmt sitqnhfssd tqtteslnth
     3361 gggyhsllls spniisditr vtpelfttls tesytvtsil paspdqgett aqllnqpvke
     3421 spsvvlptti stsvsevmts plselhtids lvthvggqls smsnftvspg iteiissqdt
     3481 syvteshsvt svlalspspl attspwethp sreaiseilt intspsaids mtskskihss
     3541 setqsiistv thgevqpsms vstqasspsi tevtqllstd lgtgnysias tlpaslgqte
     3601 tkapsvtnle tevtsgalst iistivsemm tsstvsphtt aslvshvgeq psstittlpa
     3661 spdrteiips lvthpgttsh ivsspldisp gqaestapwv thsgnegysg vlsttilssv
     3721 pgmmtsktqn htsfdtqtit sfithaeeqd slslstqgvs psitevtpsl fteldteksa
     3781 fpstlpvsvf ppgskttsvt hpqtevtsgs siiitanvpd mmssptlips dphttvslvt
     3841 hvaeqpssam silpvspstt etisplvths gteshsvtst lavssshset tpqwithtgh
     3901 egtsgtlptt tsssipdimt sttlnhtlsk sqtvkslfth vggqpslnmt tmafspsipk
     3961 lttspstkfi teshpttval ssslskttas lvtpqmestl sfltttipst ilemitppsl
     4021 ltselhttis latplegqlt sststlaiss gvtekipllv tsstteiysv sstldtspgl
     4081 espdsmdttp kieatsnils tdispsvpdl msspthipfe phatlslaty vgeqsssnis
     4141 tlthfpgikn ivtplattsl vephttvptl svpadqrett alsvthsgke vmstvsspst
     4201 lpgdpertet wvilsaktst phpttnfpfs ysdttssase vetssvttll sgaseeatsl
     4261 svhigtttst ttltvnpssi lpgstgfwps spsteytltv ssllpgfsdh pttsksstat
     4321 sqniemspsl stirhsdfvs dvisptvtll psessthalt dlettneath sattssrpte
     4381 aeitttlhgs sfallttsrt stlspenvts rpttsihpel vpfifnltit nlpyttemgh
     4441 pnsllfnrte aalklllqsl fintsigagy sgckltlirs eqngtatgvd tictyhsdpm
     4501 shpldrekly qevtqltngi trlgpctldk dslyingynh rywipttstt spslvhftln
     4561 ftitnlhhse gmgsqgsdif nnterilnhl lkpmfkissi gslysrcrli slrpekdgta
     4621 tgvdavctlh sdplgfqldr eklywelsnn tqggtklgsf tlekdslyin gftykrisas
     4681 tlntpvtssl flmetstakp ilstgpgssl vpftinftit nlkyeegmny pgswkynate
     4741 rilqrllrpl fnktsiglly sdcklallrp grdgtatatg vdaictyhad ptapgldner
     4801 vfrelsnltn dvtqlgpytl dknslyingy tqqilsstat ptspsllhft lnftitnlhh
     4861 tegmgsqgse ifnnteriln rllkpifkns sighlysgcr lislrpekee tatgvdavct
     4921 lhsdtlglql dreklyweln hntqsvtklg sftleknsly ingftyvrts dstlntpvts
     4981 smfftetsta kpifstvsys plvpftinft itnlkyeegm shpgswkfka terilqrllr
     5041 pllnktsisl lysdcklall rpgrdgtata tgvdaictyh adptapgldn ervfrelsnl
     5101 tndvtqlgpy tldknslyin gytqqilsst sppgpvlehf tinftiinlk feedmrnpgs
     5161 rkfnitqrtl qsllrtlikk ssigalyssc rlsllrpend gtgtgvdavc thypdptghg
     5221 ldrkmvywei srltygvnrl gpytldeksl yvdgytrqiv atttqtsmmt iasmgmisns
     5281 snptagpvlv pftinftvtn leyvedmghp gsrkfnater vlqkllralf sktsisslys
     5341 gcrltllrle hngtatgvda vctyhsnvsn qgldrerlyg elkrlnimel gpytldqnrl
     5401 yvngykqkil atthrpsvla tvsegtpnis saptaaspvl vpftinftit nlefekdmry
     5461 pgsrkfnite rilqsllrll fnktsagrly sgcrlvllrp eknraatgvd victyhlips
     5521 gnklvsehiy gelssltqgv tqlgpytldq nslyvngytn hilattprvs mlsnvssnta
     5581 npisnptass salqlctlnf titnlpymnd mwvpgsakfn kvekilklll kplfqnatgg
     5641 pldsgcrlts lrpkedgeat rvdmvctyhp nstgtaldsk qlyleleqlt hnitqlgpyt
     5701 ldqnslyvng ythqtavtsp sksslelftf nftitnlqyt knmqpagskk fnimekilqg
     5761 llgplfknts igplyagcrl twlssrkdgk atgidtvcty ypdhmghgla teqlylelsn
     5821 lthgvtqlgp ytldqdslyv ngyiysasgi vlntttsfpa fslapsstnn stdngtvmvp
     5881 itlnftitnl hyteemghpg slkfnstkwi lhywlgtlln ktsiapvysg crlsslrsen
     5941 hrattgvdii cnfhsysmsp rvnqdqlfwe lshgthgitr lgpytldqds lyingysfga
     6001 aalntttgel seelftvnft innlrysadm sqigspkfni tdtlmqhlls slfqrsslgp
     6061 lytgcrvdtl ksvkngaqtq vdvlctyhqv fnsrglpaks ifydlswqth gitklgpysl
     6121 dkdslfingy nepgpdvppt tpepattilp sstsslqpes ntamwhnlet ftinftisnv
     6181 pysadmisgs amfnstenvl qhllgplfqn dsfnsscrlt slrpekngts tgvvttctyq
     6241 hdpgqagmdt qglyselshl shgftqmgny tleahslyvn gyhvlgpdil tttpepstti
     6301 lpftltsmqp esttarehhl eiftinftis nlpysadmdy ssalfnstes tlqhmlrplf
     6361 qnisfnssck laslrprknq nstrvniics yqndsahpal hiqelysels hlthgftqlg
     6421 nytldkdsly vnedslyvng ynetgtkept inpdtaptll tssstfvqte sttvvghhlk
     6481 tvtvsltisn lpysahmnnd savfnstetv lkhllepllr nmsfnsscrl dslrpkkngt
     6541 ataveaicty fhdpanpgid tqrlytelsh ftygitqlgn ytldneslqv ngysethpee
     6601 spttpepatt lqpspstslh pepttehhlk iltinftisn lpyssnmsng samfsstesi
     6661 vqqllghlfq ndsfnsscrl dslrskkngt atgvdvicty hrdpahpemd iqglylemnn
     6721 ltygitqlgn ysleknslyi ngyndhsted lytaaesptt ilpspstfvq geptmamgyl
     6781 ktftlnftis nlpysadmnt gsatfnster ilqylirplv qneslysdcr laslrpkkng
     6841 tatgvnaics yhlspehpel dtqelftklt qltqgvtqlg symldqhsly vngyphqtae
     6901 itpsgyvpln vtiqgkyqin fciinwnlnn tdptsseyim lerdiedkvt tlytgsqlke
     6961 vflsclvtnm tsgstvvtie alfssyldpn lvkqiflnkt lnassywlga tyqltdlhvi
     7021 dmktsillpt eipttssnaq hfnlnftitn lpysqdiaqp gttkhqqskr sieyalnqlf
     7081 rnstiksyfs dcqvlafrsv snnnhtgvds lcnfsplarr vdrvaiyeef lrmtqngtql
     7141 lnftldrksv fvdgysqnrd ddvmknsglp fwaiilicla vllvlitclm ccflvticrk
     7201 kkegdyqvqr hrlayylshl dlrklq
//
