LOCUS       XM_003749167            6693 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus metaxin 3 (Mtx3), transcript variant
            X1, mRNA.
ACCESSION   XM_003749167
VERSION     XM_003749167.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003749167.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003749167.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6693
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6693
                     /gene="Mtx3"
                     /note="metaxin 3; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 36 ESTs, 2 long SRA
                     reads, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 112
                     samples with support for all annotated introns"
                     /db_xref="GeneID:688905"
                     /db_xref="RGD:1583002"
     CDS             54..989
                     /gene="Mtx3"
                     /codon_start=1
                     /product="metaxin-3 isoform X1"
                     /protein_id="XP_003749215.1"
                     /db_xref="GeneID:688905"
                     /db_xref="RGD:1583002"
                     /translation="MAAPMELSCWGGGWGLPSVHSESLVVLAYAKFSGAPLKVNIIDN
                     TWRGPRGDVPILTTEDSIVSKPEKILNFLRKQKFNADCELSAKQGADTLAYIALLEEK
                     LLPGVLHTFWVENDNYFTVTKPWFASRIPFPLSLILPGRMSRGALNRILLTRGVPPLY
                     HVQDVEAQIYRDAKECLNLLSNRLGTSQFFFGDTPSTLDAYVFGFLAPLYKVRFPKVH
                     LQEHLKQLPNLCRLCDDILDSYFRHGAGGISPAGQEVDANLQKLTQLVNKESNLIEKM
                     DGNLRQSPQLLPRKLPTLKLTPAEEESNSSQLLSP"
ORIGIN      
        1 ctgagagtgg gcggtagtag tacttccggg tgacggaggt cagccccggc aagatggcgg
       61 cccccatgga gcttagctgc tggggaggag gctgggggct cccttcggtc cacagcgagt
      121 ccctggtggt gttggcttat gccaaatttt ctggcgcgcc cttgaaagtc aatattatag
      181 ataacacctg gagaggtcca agaggtgatg taccaatttt gacaactgaa gacagcattg
      241 tttctaagcc tgaaaaaatt ctaaactttt taagaaaaca gaaatttaat gctgattgtg
      301 agctctcagc aaaacaaggg gcagatacac tggcgtacat cgctctcttg gaggagaagc
      361 ttctccctgg tgtgcttcac accttctggg ttgagaatga taattacttc actgtgacaa
      421 agccatggtt tgcctctcgt atccctttcc ctctgagttt aatcctgccg ggaaggatgt
      481 ctagaggagc cctgaatagg attctcttga cgaggggagt acctcccctc taccatgtcc
      541 aagatgtgga agcccagata tacagagatg ccaaggagtg cctcaatctc ctgtcgaaca
      601 gactgggaac atctcagttt ttctttggtg acacgccttc caccttagac gcatatgtgt
      661 ttggcttcct tgcacctctt tataaagtgc gttttcccaa agttcactta caagagcatc
      721 tgaaacagct ccccaacctg tgtcgcctct gcgatgacat cctggacagc tacttcaggc
      781 acggtgctgg aggcatctct ccagctggac aagaagtgga tgcaaacctg cagaaactca
      841 cccagcttgt aaataaggag tccaacctaa ttgagaagat ggatggcaac ctccgccaga
      901 gccctcagct tcttcctcgg aagctgccaa ccctcaagct gaccccagca gaagaagaga
      961 gtaactcctc acagctgctg tcgccctgac agtcacagcc agagtcttgg tgactgtggg
     1021 agtagctgct ggggccaagt gtacggagac ccgaagaaca cagtaatggg tttaagacta
     1081 aagcagaggg agctgtgtgc gaccatttta aattatgaaa gctgtgattt tagccgggca
     1141 gtgcatttta aatagaggcg aatgctaagt gacctggggg gcaagcgcga ggcactgtgt
     1201 atgaaacccc gccttaaccg gggccggcct ttgcctttgg gtcaggtgtt gcggaccaaa
     1261 gctgcaatgc ttttctgaat gtgcgctttt taatttattt aagttaattt attaacttag
     1321 tttttcttag actgtctcag tacataatat gtggtatttg gctgagatct tattcttcct
     1381 tttagaagtc tgatgcctat tttaggaacc aggaaaaata gggattattt caatagaaaa
     1441 gcctgtattt aattttaaaa agcaatgagg aatgtgcttc ttaattattc tctcttaagt
     1501 ctgctccttt ggcactttag taccacatat acaagtgcta aaggtggttt atgtaatacc
     1561 gcgatgacgc agctcgctcg cacgcacgca cgcacgcacg cacgcacgca cgcacgcacg
     1621 catggaggac taagtacttg acgataggtt tgctctgagc tagggaaggt gaacgtggca
     1681 gcatcaggcc tgtgtgtgtt gcctgctcgt ctcacgttta tgtcagttcc agagctggag
     1741 tctggctcac ctgactgtgt tcgctgaaac ccttgttgaa gtgtgccgag ttgactgtta
     1801 agcctccgtg agatgagcca tgctgagggt ccgggagctc tcccatgtgt caggtctctg
     1861 cctccttgac tcagcagctt gtttcataag catatcatgt agtcacactc actgacaaac
     1921 tatcatttcc tgttattttt aattacaggt gaaggatcca aagggaggag tcagaaatag
     1981 caggtttcta agacaattta cagttactgg ttgtaaacga gcccttcaag gatttgctgt
     2041 gtagtgaatt tacatacaac agaaacttgc tcattatagt ggctgaggtg cttctgttgt
     2101 tgtaaagact acttctgggg ttttttaaat tggaccatgt ttgggattag tgtcttacaa
     2161 gattaccatg gtgctcagaa cattttacgg agttctgtag aaatcaggct agagactcgg
     2221 ctactgtgag cagagtggag ctcagctgca tttgacctgc atctccagat tgctttgctt
     2281 ttcggtacac aaaagtctta agtcactgta aatactcttt cttgaaagct ttaaatgaga
     2341 cccaaggtta tcctcacagt cttgtccacc tctatgagtg tatttgcatt taagacacat
     2401 aatcaatgag tttcacaata cttctttaac aaagggtgtg tgtgtgtgtg tgtgtgtgtg
     2461 tgtgtgtgtg tgtgtgtgcg tgcgcatgtg aggaagtgca tgtgatgtgg gatggatgtg
     2521 tgctagtgag tgtgggttta tgcatgtgtg tgtgagtgaa ttagtgcagg gtaagtgtat
     2581 gtatgtgtgg tgtacatgtg tatgtatgag tatatgtatg tatgtaatct tctaaggcaa
     2641 gttacgacaa tctgaaatct gagtatatca gtattgtgtt ttaaaattaa tgatcgagag
     2701 gctttatagt ctctaggatt ggttttgtat tgaaggatga ttgacacatt aatcatatat
     2761 ctgtttatgc tttaatcggg gttagtcatt ttcaattatt agtagtaagc cttccagaaa
     2821 gtatttgaag tagtttataa ttgtaaaatg catgtaaaaa taggattatt tttgaaagat
     2881 gtctattcct aagagggaga accatatcca cagcactaga ttgtaaagtc tccctcggcg
     2941 ggggaaggca gagggtagca ctgaggtagt actgctactg cctatgagca ttgcttacgt
     3001 gggagatgaa cgcagcgggc tgtgttcaga agactctgga cttcaaggag tgcactgtac
     3061 cctttgtgca ctgaacgcct tgtaatcatt ttagaacaac aagcatttgt tctttttagt
     3121 ggagaggatg tctgtaaagt gagtgtttgt tttatggtca ccctgctctg aactgccttt
     3181 agccttatgt tctgtagccc atgtgcttca agaccacatt tctgagatgc agaaccttgg
     3241 ttaactgagt aagaacttag acatcagtta cttaatcagc ctcgttgtct aggcgaatgg
     3301 gacactcggg agctgtaact gagcacagga tacgtcaggg acagagaagc tcttagaagg
     3361 acaaagggcc tgtggtggct atcaggacgt ctgtgcatgt gtctgtagga aaagtggttc
     3421 acggctttga ccagacactg tgatgttgtg ctttggaggt ggtgatcaag gacaggatga
     3481 aagcagactg ctcaccttta tttttgttaa ttgtacagag ctagaaaaaa atggcttgct
     3541 ggttcccaca ggaaaacatc ctcagtgacc actgtggtca cagtggtgac ctaacactgg
     3601 agaaactgca gacaaggagg atggggctct gtagaacttg acttcacaaa aggctcacag
     3661 gaacagattt caacttaggg gtactagagg accatatact ttttagaagc aaccattttt
     3721 atttccaatt ataatcctta aaattttata attgatttat acagtaacac agggaacaaa
     3781 gatacttaag ttaaagctaa gttaacagag gcaggaagat gtagagtatt ttaagaaaac
     3841 actccgttca ggcagctcca tgtgataaag tggaattgaa tttggttggt ggggctccac
     3901 agtttttcaa cagacacaac cataaccact caaaggcaga atataaatat ttaaatatgc
     3961 tggggagctg aaaggatggc tcagtactta ggagaacgta ctgctcttgc tgagggcctg
     4021 gtttcagtgc ccaggaccta cagcgggtgg tttacgacct tctggactcc agcctcttct
     4081 gggatccatg agcccctgtg ctcacaatgt gtatgtatgc cacgcacgca catgcacaca
     4141 cacacacaca cacacacaca cacacacaca cacacacaca cacacacaga gttaacagta
     4201 aaatacattc acataggcac aggaagctgg atgatgggcc atggcatact gcacatctat
     4261 ttttataatg ccgtaagagt ctatacttac ttcaaaataa aggctttaaa aaagcaaacc
     4321 caagagagta agattatcac tatgtatcta taccttaaaa tttatcactg ctgacctagt
     4381 atttccaaat gagaactata ttattattga taatttttta tttcactctt gagttcacag
     4441 aaaacacagc tcaggtttct aacagatgct ttcccgaaga gctctcctgc cttatgagaa
     4501 agtttctaac agcctcacag caaaactcac ttccctcaaa atatcaagat gcttatgatt
     4561 ttgtgtttct aatgtgcatt ttcccctatg gcactgggtt cataattgag gacaagatat
     4621 tttgagtcct ctcctctgtc tgagtgtgtg cattcctctt cgcctgctgt ttctctctgt
     4681 gtattcacaa tgtggaccat gtgcactgac accaccctgt gtggcagagg tattatgacc
     4741 cagccgtgca cttttgtttt tgctcagagg cagtttgtaa ttgactttgc tttgtcctgc
     4801 ctgtttttag agttgaaatc ctgagcagag ccacagagat cgactgggtt gtgatgatag
     4861 cctttgtatc cattcttgga ggtaaaagtc agatgttggt ctccccgccc gctcctgtgt
     4921 tgctcagtta tgcgaagctt acattcattt ctcagtgttt tcacgtctct taaactaatt
     4981 ttaaagaaat ccatggatac gtgaagtcac agatcagtgg gccaaccctg aaagggttaa
     5041 ctgaagtgtc attgtcacca gatctgagtg ctgctcttct tgatgaaaag gccaggaaga
     5101 cttttgctgt ctgtctttaa gtgtgtgtaa aatagtttag tgtagaagtc gctgttgggt
     5161 gttgtaatct ctgggagccc agggtgcttg ttttgcactc aggactattg tgtccaaaac
     5221 aaatgggcac tctgggaatt taagaggcta aaaaaatatt tttccagaaa aacagtcctg
     5281 aattactgaa aagaattaac attcttgaac acgtagtaaa agggcagctg gagctgatgg
     5341 cttgtgaaca gtgagggcgt gttgtggcgg ggtcgctcta acagaataag ctggcttctt
     5401 tcaaaggggg caaaggctag ttgttttgtg ccctcgttat tcttaacttg aagttggaag
     5461 gtaaaaacat tagtttatgc aagagtagat tctaagaggg tatttggcac aatatattgt
     5521 cctaataagt ttgggaaaca ctggatcatg caaagctgac ttgctgtagg cttttcagaa
     5581 cctttgatgt gtaaatgtgt ggttttggtt tccagcttca gagatgtttc attagcaaag
     5641 aggacagtga accaggctgt gtgcaggcgt gggctcatct ccctccacta agcatctccg
     5701 gttaatatgc cacttcccta acttatttta ctgaggattt tttcaaagta ggtgtttgat
     5761 gggatttgtg ttctgacaag tttacttagg agaacattga gtattttgtt ttctgtgctc
     5821 attacaaagt ttctgctttt gagtgttttt ctctggtgac aggaatggta actaagtaag
     5881 ctttatttca ccagagtata aactagctcg ccaatgaggc tatgggattc tgtcagcctt
     5941 tgtaacatat atacacagtg gcaggctggg cattccaggg tttggatgtc catttgaagc
     6001 acaacttgcc gcggggttct gagtgctagt gtcatggcga gcatccagcc acatgaaaag
     6061 ctcttgggtc ttacttagtt ctgatgcttc ggttttcctc ttgaagatta gagcaatcaa
     6121 tgcctgtaat catgtagttt acatatccca gatccttgcc aggcacagga aaggacctgc
     6181 cagagtttgc atcagccctt ggagtcactg agatggggaa ggccactctg gctgcttgtt
     6241 ctgtggtcca tgggctgctg gcgtcctgat ctgatggagg agggtgtaca cgggcctgta
     6301 agtgcataaa gatgactcgg gtttctctta tatcttactg tttgtaaaag agaaactgtc
     6361 ttgcagtgag actgaagttt tttagtttcc tggaagatca acagaggaaa ggacaagagc
     6421 tgcatatgat gcaagtggac cccgcctccc caaggagtct caggatggga aacaatgtaa
     6481 acatctgttc ctgtatgcaa atactatatc agcaatgccg gccatcgcct cgtagtctag
     6541 ccttgcctac tgtgaatgta tttttcctag agctgctgta gaaataccca gaagcggaat
     6601 tggtggtcat tgttaagaat ttattctaat aaatgagaaa ctggatataa cctcaaaata
     6661 gctatttttt caataaaatt tcaaatcacc tga
//
