LOCUS       XM_039094527            1896 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus microtubule associated scaffold
            protein 1 (Mtus1), transcript variant X8, mRNA.
ACCESSION   XM_039094527
VERSION     XM_039094527.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039094527.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1896
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1896
                     /gene="Mtus1"
                     /gene_synonym="Atip3b; ATIP4; Mtsg1"
                     /note="microtubule associated scaffold protein 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 43 ESTs, 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     43 samples with support for all annotated introns"
                     /db_xref="GeneID:306487"
                     /db_xref="RGD:631381"
     CDS             16..1056
                     /gene="Mtus1"
                     /gene_synonym="Atip3b; ATIP4; Mtsg1"
                     /codon_start=1
                     /product="microtubule-associated tumor suppressor 1
                     homolog isoform X6"
                     /protein_id="XP_038950455.1"
                     /db_xref="GeneID:306487"
                     /db_xref="RGD:631381"
                     /translation="MGCPSSKMCLSPPQAAARREEALKQHKTLSQELVSLRGELVAAS
                     STCEKLEKARNDLQTAYEGFVQKLNQQHQTDQTELENRLKEFYTAECEKLQSIYIEEA
                     EKYKTQLQEQFDNLNAAHETTKLEIEASHSEKVELLKKTYETSLSEIKKSHEMEKKLL
                     ENLLNEKQESLEKQINDLKSENDALNERLKSEEQKQLSREKANSKNPQVMYLEQELES
                     LKAVLEIKNEKLHQQDLKLMKMEKLVDNNTTLVDKLTRFQQENEELKARMDRHMAISR
                     QLSTEQAALQESLEKESKVNKRLSMENEELLWKLHNGDLCSPKRSPTSSAIPFQSPRN
                     SGSFSSPSISPR"
ORIGIN      
        1 gaccggagct ggaaaatggg ctgccctagc agcaaaatgt gcctctctcc tccacaggca
       61 gcagcaaggc gggaggaagc actgaagcaa cacaaaaccc tctctcaaga acttgtcagc
      121 ctccggggag agctagttgc tgcttccagc acctgtgaga agctagaaaa ggccaggaat
      181 gacttgcaaa cagcgtatga aggcttcgtc cagaaactaa accagcagca tcagacggac
      241 cagacggaac tggagaaccg gctgaaggag ttttacacgg cagagtgtga gaagctccag
      301 agcatttaca ttgaggaggc agaaaaatac aaaactcaac tgcaagagca gtttgacaac
      361 ttaaatgccg cccatgaaac cacgaagttg gagattgaag ctagccactc agagaaagtg
      421 gagttactga agaagaccta tgaaacctcc ctttcagaaa tcaagaaaag ccatgaaatg
      481 gaaaagaagt tactggagaa tctacttaat gagaagcagg aatcactaga gaaacaaatc
      541 aatgatctga agagtgagaa cgatgcttta aacgaaaggt tgaaatcaga ggaacaaaag
      601 caactgtcaa gagagaaggc aaactcaaaa aaccctcagg tcatgtatct ggagcaagaa
      661 ctagaaagcc tgaaagctgt gttggagatc aagaatgaga agctgcatca gcaggacctg
      721 aagctaatga agatggaaaa gctggtggac aacaacacaa cattggttga caagctgacg
      781 agattccagc aggaaaacga ggagctgaaa gctcgcatgg acagacacat ggcaatttca
      841 agacaacttt ccacagagca ggcagcgctg caagagtccc ttgagaagga gtcaaaggtc
      901 aacaagaggt tgtccatgga gaatgaggag ctgctgtgga aactgcacaa cggagacctc
      961 tgcagcccca agagatcccc cacatcctcg gccatccctt tccagtcccc caggaattct
     1021 ggttccttct ccagccccag catctcaccc agatgacggt ttctgaacac aggagactct
     1081 cggaaggcac tgaggtgtgg ttctgcagga ctgaccctct cgtgggaact aggcctgtgt
     1141 tagctttctg ggctgtccac aggataactg gagagcagcc accaaccgta tcagctcctt
     1201 acacatcgag agctccagag gatgactttt aacttggtcc aaaagcctcc tccaaagaca
     1261 gatttcggaa ctgaagtgga catagttgca caaagcactt atggaacgag ggaaccttgt
     1321 tctttgcctt ccttcaccta agcataaggg gaaaactctc aggggcctat taagataaag
     1381 atttataacc tttataatgt tcttcaccag agacaccttc ttgtgatttt tatttcggtc
     1441 tgactgtggg caggggtgtg tgtgtgtgag tgaattgggt gtactggtgt gtcacatgac
     1501 tgtcaaccct gccccccact gctgtgtatt aaaagttaac agctggatac agctgtgcct
     1561 gtattaatca agtcatcatc agcatacacg tgtcaacaaa agccatagaa gagagagcaa
     1621 tagtgcttga atttctcccc actcgtctca gcgctatgac atggcagggc tagggtaaga
     1681 caaggaaaag cctttggttc attgatgtct gtacatttct ctgttagttt ttctgtgttt
     1741 agcattatcc attgatagca gtttgatttt tttttccccc tgtagatttc tatgagccta
     1801 atgactgtac tctgattcat tttctcaggc tacgagcaaa tgtaccctaa tttttctaaa
     1861 cacaaatctg tataaagaat aagagggcag taccaa
//
