LOCUS       XM_017600120            2363 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus microtubule associated scaffold
            protein 1 (Mtus1), transcript variant X5, mRNA.
ACCESSION   XM_017600120
VERSION     XM_017600120.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051351.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017600120.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017600120.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2363
                     /gene="Mtus1"
                     /gene_synonym="Atip3b; ATIP4; Mtsg1"
                     /note="microtubule associated scaffold protein 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 42 ESTs, 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:306487"
                     /db_xref="RGD:631381"
     CDS             42..1523
                     /gene="Mtus1"
                     /gene_synonym="Atip3b; ATIP4; Mtsg1"
                     /codon_start=1
                     /product="microtubule-associated tumor suppressor 1
                     homolog isoform X3"
                     /protein_id="XP_017455609.1"
                     /db_xref="GeneID:306487"
                     /db_xref="RGD:631381"
                     /translation="MPVCVSRGRSIVLHSILLLRSSWSQPEMMLTPYIRRGSNASINK
                     FEEKPPKQAFQNGSGPLYLKPLGPRAHAHLLKTPPKGPSRKSLFTAFNSVEKGRQKNP
                     RSLCIQTQTAPDVLSTERTLELADYKTKCENQSGFILHLKQLLSCGNTKFEALTVVIQ
                     HLLSEREEALKQHKTLSQELVSLRGELVAASSTCEKLEKARNDLQTAYEGFVQKLNQQ
                     HQTDQTELENRLKEFYTAECEKLQSIYIEEAEKYKTQLQEQFDNLNAAHETTKLEIEA
                     SHSEKVELLKKTYETSLSEIKKSHEMEKKLLENLLNEKQESLEKQINDLKSENDALNE
                     RLKSEEQKQLSREKANSKNPQVMYLEQELESLKAVLEIKNEKLHQQDLKLMKMEKLVD
                     NNTTLVDKLTRFQQENEELKARMDRHMAISRQLSTEQAALQESLEKESKVNKRLSMEN
                     EELLWKLHNGDLCSPKRSPTSSAIPFQSPRNSGSFSSPSISPR"
ORIGIN      
        1 agccaagggc agtcagtgtc tagggtagtg gctgtcttca catgcctgtc tgtgtttctc
       61 ggggaagaag catagttctc cacagtattc ttcttctgag atcttcttgg tcccaaccag
      121 agatgatgct cactccttac atcagaagag gtagtaatgc ttccatcaac aaatttgaag
      181 agaaaccccc caaacaagcc tttcagaatg gctcgggacc cttatatctg aagcctttgg
      241 gacccagagc tcatgcacac ttgctcaaaa ctcctccaaa aggtccttcg agaaagagtc
      301 tgtttacagc ttttaattca gttgaaaaag gcaggcagaa aaaccccaga agcctgtgca
      361 tccagacgca gacagctcca gatgtgctgt ccaccgaaag gacccttgag ttggctgatt
      421 acaagacaaa atgtgaaaat caaagtggat ttatcttgca cctcaagcag cttctctcct
      481 gtggtaatac caagtttgaa gcactcacag tcgtgatcca gcacctcctg tctgagcggg
      541 aggaagcact gaagcaacac aaaaccctct ctcaagaact tgtcagcctc cggggagagc
      601 tagttgctgc ttccagcacc tgtgagaagc tagaaaaggc caggaatgac ttgcaaacag
      661 cgtatgaagg cttcgtccag aaactaaacc agcagcatca gacggaccag acggaactgg
      721 agaaccggct gaaggagttt tacacggcag agtgtgagaa gctccagagc atttacattg
      781 aggaggcaga aaaatacaaa actcaactgc aagagcagtt tgacaactta aatgccgccc
      841 atgaaaccac gaagttggag attgaagcta gccactcaga gaaagtggag ttactgaaga
      901 agacctatga aacctccctt tcagaaatca agaaaagcca tgaaatggaa aagaagttac
      961 tggagaatct acttaatgag aagcaggaat cactagagaa acaaatcaat gatctgaaga
     1021 gtgagaacga tgctttaaac gaaaggttga aatcagagga acaaaagcaa ctgtcaagag
     1081 agaaggcaaa ctcaaaaaac cctcaggtca tgtatctgga gcaagaacta gaaagcctga
     1141 aagctgtgtt ggagatcaag aatgagaagc tgcatcagca ggacctgaag ctaatgaaga
     1201 tggaaaagct ggtggacaac aacacaacat tggttgacaa gctgacgaga ttccagcagg
     1261 aaaacgagga gctgaaagct cgcatggaca gacacatggc aatttcaaga caactttcca
     1321 cagagcaggc agcgctgcaa gagtcccttg agaaggagtc aaaggtcaac aagaggttgt
     1381 ccatggagaa tgaggagctg ctgtggaaac tgcacaacgg agacctctgc agccccaaga
     1441 gatcccccac atcctcggcc atccctttcc agtcccccag gaattctggt tccttctcca
     1501 gccccagcat ctcacccaga tgacggtttc tgaacacagg agactctcgg aaggcactga
     1561 ggtgtggttc tgcaggactg accctctcgt gggaactagg cctgtgttag ctttctgggc
     1621 tgtccacagg ataactggag agcagccacc aaccgtatca gctccttaca catcgagagc
     1681 tccagaggat gacttttaac ttggtccaaa agcctcctcc aaagacagat ttcggaactg
     1741 aagtggacat agttgcacaa agcacttatg gaacgaggga accttgttct ttgccttcct
     1801 tcacctaagc ataaggggaa aactctcagg ggcctattaa gataaagatt tataaccttt
     1861 ataatgttct tcaccagaga caccttcttg tgatttttat ttcggtctga ctgtgggcag
     1921 gggtgtgtgt gtgtgagtga attgggtgta ctggtgtgtc acatgactgt caaccctgcc
     1981 ccccactgct gtgtattaaa agttaacagc tggatacagc tgtgcctgta ttaatcaagt
     2041 catcatcagc atacacgtgt caacaaaagc catagaagag agagcaatag tgcttgaatt
     2101 tctccccact cgtctcagcg ctatgacatg gcagggctag ggtaagacaa ggaaaagcct
     2161 ttggttcatt gatgtctgta catttctctg ttagtttttc tgtgtttagc attatccatt
     2221 gatagcagtt tgattttttt ttccccctgt agatttctat gagcctaatg actgtactct
     2281 gattcatttt ctcaggctac gagcaaatgt accctaattt ttctaaacac aaatctgtat
     2341 aaagaataag agggcagtac caa
//
