LOCUS       NM_001025723            1236 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Rattus norvegicus mitochondrial translation release factor 1 like
            (Mtrf1l), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001025723 XM_341751
VERSION     NM_001025723.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1236)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Mar 3, 2021 this sequence version replaced NM_001025723.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097970.1, SRR26643296.383.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760476 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG   :: upstream AUG and CDS
                                                  extension is not conserved
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-299               JAXUCZ010000001.1  44625880-44626178   c
            300-379             JAXUCZ010000001.1  44622894-44622973   c
            380-563             JAXUCZ010000001.1  44621270-44621453   c
            564-727             JAXUCZ010000001.1  44619898-44620061   c
            728-845             JAXUCZ010000001.1  44618334-44618451   c
            846-982             JAXUCZ010000001.1  44616777-44616913   c
            983-1236            JAXUCZ010000001.1  44615921-44616174   c
FEATURES             Location/Qualifiers
     source          1..1236
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q11"
     gene            1..1236
                     /gene="Mtrf1l"
                     /note="mitochondrial translation release factor 1 like"
                     /db_xref="GeneID:361473"
                     /db_xref="RGD:1598312"
     exon            1..299
                     /gene="Mtrf1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             62..1183
                     /gene="Mtrf1l"
                     /note="peptide chain release factor 1-like, mitochondrial;
                     mitochondrial translational release factor 1-like"
                     /codon_start=1
                     /product="peptide chain release factor 1-like,
                     mitochondrial precursor"
                     /protein_id="NP_001020894.1"
                     /db_xref="GeneID:361473"
                     /db_xref="RGD:1598312"
                     /translation="MRSGFLRSARRLWARRAISRMPPPSEELLARGGPLRAFLERRVG
                     SEAGGLDAGSPQLAAAARLLNEKERELRDTESLLHDENEDLKKLAESEIALCQKEIAE
                     LKHRIISLLVPSEDMDGSDLILEVTAGVGGQEAMLFTSEMFDMYQQYAAFKRWHFETL
                     EYFPSELGGLRHASASIGGPEAYRHMKFEGGVHRVQRVPKTERQGRIHTSTMTVAILP
                     QPTEIKLVINPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGIISECQQERSQLKN
                     RELAMKKLRARLYSMRLEEETAKRYSARKIQVGTKGRSEKIRTYNFPQNRVTDHRINK
                     SLHDLESFMQGDCLLDDLIQSLKDYSDYESLVEMISRKD"
     exon            300..379
                     /gene="Mtrf1l"
                     /inference="alignment:Splign:2.1.0"
     exon            380..563
                     /gene="Mtrf1l"
                     /inference="alignment:Splign:2.1.0"
     exon            564..727
                     /gene="Mtrf1l"
                     /inference="alignment:Splign:2.1.0"
     exon            728..845
                     /gene="Mtrf1l"
                     /inference="alignment:Splign:2.1.0"
     exon            846..982
                     /gene="Mtrf1l"
                     /inference="alignment:Splign:2.1.0"
     exon            983..1236
                     /gene="Mtrf1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcatagttct tcctggagtg ttctctgtat gtttttggct acggtgggcg gctgggccag
       61 catgcggagc gggtttctgc gcagtgcccg gcgcctgtgg gcccgccgcg ccatcagccg
      121 catgccaccg ccttccgagg agctcctcgc ccgcggcggg cccctgcgag ccttcctgga
      181 gcgccgcgtg ggctcggagg ccggcggtct ggacgctggg agtccccagc ttgccgcggc
      241 ggcccggctg ctgaacgaga aggagcggga gctacgggac actgaatcct tgctgcacga
      301 tgagaatgaa gatttgaaga aactcgcaga gagtgagata gctttgtgtc aaaaagaaat
      361 agccgagctg aagcatcgga tcatctccct tttggttcct tcagaagaca tggatggcag
      421 tgacctgatc ctggaggtga ctgcgggtgt gggtggtcag gaagccatgc ttttcacttc
      481 tgagatgttt gacatgtacc agcaatacgc tgcatttaaa agatggcatt ttgaaacact
      541 ggaatatttc ccaagtgaac taggtggcct cagacatgca tcagccagca tcggaggtcc
      601 agaagcctac agacacatga aatttgaagg aggagtacat agagtacaga gagtaccaaa
      661 gacagagagg caaggccgca tccacaccag caccatgacg gtggcaattc tgccccagcc
      721 tactgagatt aaactggtga ttaaccctaa agatttgaga attgatacga agagagcaag
      781 tggagctgga ggtcagcacg taaataccac agacagtgct gttcggatag ttcatcttcc
      841 cacaggtatt atttctgaat gccagcaaga aagatctcag ctgaagaaca gggagctggc
      901 tatgaaaaag ttacgtgcaa ggttatacag catgcgtcta gaggaagaaa ctgctaaaag
      961 atacagcgct cgaaagatcc aggttggaac taaaggaaga tcagagaaaa taagaacata
     1021 caactttcca caaaataggg tcacagatca cagaataaac aaatcactac atgaccttga
     1081 gagcttcatg caaggagact gtcttctgga tgacctgata cagtcactga aggactattc
     1141 agattatgaa tctctagtag aaatgatttc cagaaaagac taagcttctt tgtaaagata
     1201 tatgttttta atatacactg ggaaaattct agtgca
//
