LOCUS       XM_006252367            2028 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial translation release
            factor 1 (Mtrf1), transcript variant X2, mRNA.
ACCESSION   XM_006252367
VERSION     XM_006252367.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006252367.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006252367.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2028
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2028
                     /gene="Mtrf1"
                     /note="mitochondrial translation release factor 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 176
                     samples with support for all annotated introns"
                     /db_xref="GeneID:686234"
                     /db_xref="RGD:1584329"
     CDS             444..1784
                     /gene="Mtrf1"
                     /codon_start=1
                     /product="peptide chain release factor 1, mitochondrial
                     isoform X1"
                     /protein_id="XP_006252429.1"
                     /db_xref="GeneID:686234"
                     /db_xref="RGD:1584329"
                     /translation="MSFHLCVWLFRNLSSLSACSQRHVFLYGQQFRQINLDPRLWNFR
                     QNKTHVLYRLLNKSWSRGYCQGTRKLWKHKALQKYMEGLNDEYQSLDQCLQDISEDEG
                     DRRASHRRHAELAPLVAVYQEIQEAEQAIEELESMCKSLNKQDEKQLQELVSEERQII
                     DQKIHRLYSELLEHLVPKEKCDRSNVILEVTSGRTTGGDICQQFTREIFDMYQNYSYY
                     KHWRFELLNYTPADYGGLHHAAARISGDSVYKHLKYEGGIHRVQRIPEVGLSSRMQRI
                     HTGTMSVIVLPQPDEVDVKVDPRDLRVDTFRARGAGGQHVNTTDSAVRLVHIPTGLVV
                     ECQQERSQLKNKEIALRVLRARLYQQIIEKDKCQQQNARKLQVGTRAQSERIRTYNFT
                     QDRVTDHRIAYEVRDIKEFLRGEKCLDQLIERLLQSADEEAIAEFLDESLQSVK"
ORIGIN      
        1 tgttagggca ctaggaggag gtgatctgct ccctttggac ttcaaggctc ccgcgagtca
       61 gctccaaata agttccgcgc gccgtccttc cagaggagtc tccttctgac ttcatcattt
      121 cattcttgtt tacccttacg gacacctaag gaccattact ctgcgagaag tgtcaaattg
      181 gaggaggagc cgggagcgaa ccgtaacccg gaagcagtag cctggaaatg atcatgcttg
      241 cagtacctgg cgctgaaatg ttgcgggcac agaaggctca gttatcagta agaaacgaga
      301 atgtcatttt tcttctttta attaggttct cagctaagag agaagcatcc tcaagaggtg
      361 gtcacagggt tgagaatgaa aagcactgat cttggaatag acaagctgtt ataatacaaa
      421 ctctgcctct atccactgct gagatgagtt ttcacctgtg tgtttggctt tttcggaatc
      481 tgtcgtctct cagtgcgtgc tcccagagac atgtcttcct ctatggtcag caatttagac
      541 aaataaacct tgatccaagg ctgtggaatt ttagacaaaa taagactcat gttctctatc
      601 ggctcttaaa taaaagttgg tccaggggct actgtcaagg cacaaggaag ctttggaaac
      661 ataaagccct acagaagtat atggaaggcc tgaatgacga gtaccaaagc cttgaccagt
      721 gcttgcagga catctctgag gacgaaggag accgaagggc ctcacacaga aggcacgctg
      781 agttggcgcc actcgtggct gtttatcaag aaattcagga ggctgaacaa gccattgaag
      841 aattagagtc aatgtgtaaa agtctaaata aacaagatga aaagcagctg caagaacttg
      901 tgtcagaaga aaggcaaatc attgatcaga agatccacag actgtatagt gagcttttgg
      961 agcatttagt gcctaaggag aagtgtgacc ggagcaacgt tattctagaa gtgacatccg
     1021 gaagaactac tggaggtgat atctgccaac aatttacccg ggaaatattt gatatgtacc
     1081 agaattactc atactataaa cactggagat ttgagctgct aaattacaca ccagcagatt
     1141 acggtggact gcatcatgca gctgcccgca tttctggtga cagtgtctat aagcatttga
     1201 agtatgaagg tggaattcat cgagttcagc gaatcccaga ggtgggcctg tcatctcgga
     1261 tgcagcgtat tcacacgggg acgatgtcag ttattgtcct tccacagcca gatgaggtag
     1321 atgtgaaagt agatcccagg gatctgcgcg tagacacatt tcgagccaga ggagccggtg
     1381 ggcagcatgt caacacaaca gacagtgctg tgaggctcgt ccatatcccc acaggactgg
     1441 tggtagaatg ccaacaagaa cgatcacagt tgaaaaataa agaaatagct ttgcgtgtgt
     1501 tgagagctag actctaccaa cagattatcg agaaagacaa gtgtcagcag cagaatgcta
     1561 ggaaactgca ggtgggaaca agagcccagt cggagagaat tcggacatat aatttcaccc
     1621 aggatagagt cactgaccac aggatagcgt atgaagtccg tgacattaag gaatttttac
     1681 gtggtgagaa gtgcctggat cagctaattg agagactgct tcaatcagca gatgaagagg
     1741 ccattgctga atttttggat gaaagccttc aatcagtgaa ataaatgtgg tttattattg
     1801 ttatataaat gaagtggact ttaatcagga aacagacagg tgtggaaact taataaatat
     1861 tcataaagtt tggatgcgcc cacagagttt ttatagaaat cattttaatg aaagaaactc
     1921 acatttcttg acatagaggt ttattttagg tttcagtaag taatccaact ctccaagtag
     1981 aaaataagct tgtaacatca aaaagaaaaa taaaatatga aaaattga
//
