LOCUS       XM_006238884            2780 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus metal-regulatory transcription factor
            1 (Mtf1), transcript variant X1, mRNA.
ACCESSION   XM_006238884
VERSION     XM_006238884.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006238884.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006238884.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2780
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2780
                     /gene="Mtf1"
                     /note="metal-regulatory transcription factor 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 10 ESTs, 1 long SRA read, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 168 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362591"
                     /db_xref="RGD:1308956"
     CDS             194..2218
                     /gene="Mtf1"
                     /codon_start=1
                     /product="metal regulatory transcription factor 1 isoform
                     X1"
                     /protein_id="XP_006238946.1"
                     /db_xref="GeneID:362591"
                     /db_xref="RGD:1308956"
                     /translation="MGEHSPDDNIIFFKGEEDDLTPHDKMLRFVDDNGLVPSSSGTVY
                     DRTTVLIEQDPGTLEDDEDDVQCGEHLPFLVEGEEGFLIDQEAMSQGYVQHIISPDQI
                     HLTINPGSTPMPRNIEGATLTLQSECPETKRKEVKRYQCTFEGCPRTYSTAGNLRTHQ
                     KTHRGEYTFVCNQEGCGKAFLTSYSLRIHVRVHTKEKPFECDVQGCEKAFNTLYRLKA
                     HQRLHTGKTFNCESQGCSKYFTTLSDLRKHIRTHTGEKPFRCDHDGCGKAFAASHHLK
                     THVRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGHDNKGTAYSALPQHNGSEDTNHS
                     LYLSELGLLSTDSELQENSSSTQDQDLSTISPAIIFESMFQNPDDPAIQDDPLHTAAL
                     IDSFNGDAESVSDVPPPAGNSASLSLPLVLQPGISEPPQPLLPASTPSAPPPAPSLGP
                     GSQPAAFGSPPALLQPPEVPVPHSTQFAANHQEFLPHPQAPPQTIVPGLSVVAGAPAS
                     AATVASAVAAPAPPQSTTEPLPAMVQTLPLGANSVLTNNPTITITPTPNTAILQSSLV
                     MGEQNLQWILNGATSSPQNQEQIQASKVEQVYFTTAVPVASSTGSSVQQIGLSVPVII
                     IKQEEACQCQCACRDSAKERAAGRRKGCSSPPPPEPNPQPPDGPSLQLPP"
ORIGIN      
        1 ggcagcgggc gcagggatcg gccggcctct ccttcctccg gaaagcggaa gcggaagtga
       61 cgctagggac aggtgggggc aatcatggtg ccgctgggga ggggagaagc tgccgctgcc
      121 gctgttgccg ggagccgcgg agaaaggcca ttaccttttc atttctcaca attgggctga
      181 gcacaagtga accatggggg aacacagtcc agacgacaac atcatcttct ttaagggaga
      241 ggaagatgac ctaaccccgc atgacaagat gctcaggttt gtggatgaca acggactggt
      301 gccttcctca tctggaactg tttatgatag gaccactgtt ctcatagaac aggaccctgg
      361 cactttggag gatgatgaag acgatgtaca gtgtggagaa cacttgcctt ttctggtgga
      421 aggtgaagag ggcttcctaa tagatcagga agcaatgtcc cagggttacg tacaacacat
      481 tatctcacca gatcagattc atttgactat aaaccctggt tccacgccca tgccaagaaa
      541 cattgaaggt gcgactctta ctctgcagtc ggaatgtcct gaaacgaaac ggaaagaagt
      601 aaagcggtac cagtgcacct ttgagggatg cccgcgcacc tacagcacag caggcaacct
      661 acgcacccac cagaagactc accgaggaga gtacaccttt gtctgtaatc aggagggctg
      721 tggcaaggcc ttcctcacct cctacagcct caggatccat gtgcgagtgc acacaaagga
      781 gaagccattt gagtgtgacg tgcagggctg tgagaaggca ttcaacacac tgtacaggtt
      841 gaaagcacat cagaggcttc acacagggaa aacgtttaac tgtgaatctc aaggctgcag
      901 caagtacttc accacactca gtgatctgcg gaagcacatt cgaacccata caggagaaaa
      961 gccatttcga tgtgatcatg acggctgtgg aaaagcattt gcagcaagcc accaccttaa
     1021 aactcacgtc cgtacacaca ctggcgaaag acccttcttc tgccccagta acggctgtga
     1081 gaagacattt agcactcagt acagtctcaa aagtcacatg aaaggtcacg ataacaaagg
     1141 caccgcgtac agtgcacttc ctcaacacaa tggatcagag gatacaaatc actcacttta
     1201 tctgagtgag ttgggccttc tgtccacgga ttctgaattg caagaaaatt ccagttcgac
     1261 acaggaccag gacctcagca caatttcacc agcaatcatc tttgaatcaa tgttccagaa
     1321 tcctgacgac cctgcgattc aggatgaccc tctgcacaca gctgccttga ttgacagctt
     1381 caacggagat gcagaatctg tcagtgatgt cccaccgcct gcaggaaatt cagcgtcttt
     1441 atctcttcca cttgtactgc agcctggcat ctccgagcca ccccagcctc tgctgccagc
     1501 ctcaactccg tccgctcctc cacctgctcc ctccctagga cctggttccc agccagctgc
     1561 atttggcagc ccccctgctc tcttacaacc tccagaagtg cctgttcccc acagcacaca
     1621 gtttgctgct aatcatcaag agtttcttcc gcacccccag gcgccacccc agaccatcgt
     1681 accaggactc tctgttgttg ctggggctcc tgcatcagca gcaacagtgg catcagccgt
     1741 ggcagcacca gccccaccac aaagtactac tgagcccctg cctgctatgg tccagactct
     1801 gcccctgggt gccaactctg tcctaactaa taatcccacc ataaccatca ccccaactcc
     1861 taacacggca atcctgcagt ccagcctagt catgggagag cagaacttac agtggatatt
     1921 gaacggtgcc accagttcac cacaaaacca agaacaaatt caagcatcga aagtggagca
     1981 ggtgtacttt accaccgcag taccagtagc cagtagcaca gggagctctg ttcagcagat
     2041 tggcctcagt gttcctgtga tcatcatcaa acaagaggag gcctgtcagt gtcagtgtgc
     2101 gtgccgggac tctgcgaagg agcgggcggc cggccggaga aagggatgtt cttccccacc
     2161 ccctccagag ccgaaccccc agcctcctga tgggcccagc ctgcaactgc caccctagac
     2221 ttctccctca tccctgcccc cctcatcctc ctccaccgga ccctcttcct gtgagcaaag
     2281 cagacaggct gaggctcctc agaccctcca aaatgttaag tgccatggat gtgtcagagt
     2341 tcctgtccct ccagagcctg gacaccccgt ccaatccggt tcacagtgaa gcactactgc
     2401 aggggtagag gaaagagcct ggccagcagc ttctccaggg gaagggcctg tgcgcacccc
     2461 tccaggaaca gggtgagcag ggagtgccgg ccgggtgtga tgctgcctgc cgtcatgggg
     2521 tcagaaattg gaaggatgaa gaaatctgcc atctgaaagc ctcacctttc agacatattt
     2581 tctttactca taccccagga acatccattt taaggaactg atctttggag gaaaaaacaa
     2641 aaaaagaaaa aaaaaaaaag ctaagttata agtgaactgt ctggctgcac tgtatgtcac
     2701 ttttgcttat tgttatgtga acttggaaat taaggttact tgtatgcata aaagttctaa
     2761 atgaaagggt gtggtttcca
//
