LOCUS       NM_001037209            1303 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus mitochondrial transcription termination factor 4
            (Mterf4), mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001037209 XM_343631
VERSION     NM_001037209.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1303)
  AUTHORS   Camara,Y., Asin-Cayuela,J., Park,C.B., Metodiev,M.D., Shi,Y.,
            Ruzzenente,B., Kukat,C., Habermann,B., Wibom,R., Hultenby,K.,
            Franz,T., Erdjument-Bromage,H., Tempst,P., Hallberg,B.M.,
            Gustafsson,C.M. and Larsson,N.G.
  TITLE     MTERF4 regulates translation by targeting the methyltransferase
            NSUN4 to the mammalian mitochondrial ribosome
  JOURNAL   Cell Metab 13 (5), 527-539 (2011)
   PUBMED   21531335
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001037209.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098676.1, FQ218478.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760400,
                                           SAMN12840106 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-22                JAXUCZ010000009.1  101286215-101286236 c
            23-521              JAXUCZ010000009.1  101284990-101285488 c
            522-706             JAXUCZ010000009.1  101283113-101283297 c
            707-1303            JAXUCZ010000009.1  101281560-101282156 c
FEATURES             Location/Qualifiers
     source          1..1303
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q36"
     gene            1..1303
                     /gene="Mterf4"
                     /gene_synonym="Mterfd2"
                     /note="mitochondrial transcription termination factor 4"
                     /db_xref="GeneID:363289"
                     /db_xref="RGD:1562440"
     exon            1..22
                     /gene="Mterf4"
                     /gene_synonym="Mterfd2"
                     /inference="alignment:Splign:2.1.0"
     CDS             2..1045
                     /gene="Mterf4"
                     /gene_synonym="Mterfd2"
                     /note="mTERF domain-containing protein 2; MTERF domain
                     containing 2"
                     /codon_start=1
                     /product="transcription termination factor 4,
                     mitochondrial"
                     /protein_id="NP_001032286.1"
                     /db_xref="GeneID:363289"
                     /db_xref="RGD:1562440"
                     /translation="MASLGRQVPEWHRLMALSWACLARQTCHFRKEKKMSPSLFCKLT
                     TVPSRGNFQEFSSVRPKKYMQEPEHRTRLVPCLHEEQRTCMGSESLELERAISSLQDM
                     GFAEAHIDSLLNIQPSVHPQQLLDIISELLLLGLNPEPVFMALKKNPQLLKLSATQMK
                     RRSSYLRKLGLGEGKLKRVLSVCPKVFTMRQQDIDNIVKVLKEKCLFTVQHITDILHR
                     CPAVLQEDPSELEYKFQYAYFRMGLTHLDIVRTDFLQYSIAKVKQRHIYLERLGRYQT
                     PDKKGQTQIPNPSLKNILRVSEAEFLARTACSSAEEFEVFKKLLDQEEEESESHMSEE
                     EEEEEEEEEEELP"
     exon            23..521
                     /gene="Mterf4"
                     /gene_synonym="Mterfd2"
                     /inference="alignment:Splign:2.1.0"
     exon            522..706
                     /gene="Mterf4"
                     /gene_synonym="Mterfd2"
                     /inference="alignment:Splign:2.1.0"
     exon            707..1303
                     /gene="Mterf4"
                     /gene_synonym="Mterfd2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 catggcttcg ctgggaaggc aggttcctga atggcatcgt ctaatggccc tttcctgggc
       61 ctgtttggct aggcagacct gtcatttcag aaaagagaaa aagatgagtc cttctttgtt
      121 ttgtaaactg actacagtac ccagtagagg gaactttcaa gagttttcca gcgttagacc
      181 caaaaagtac atgcaggaac cagaacacag gacacgtctt gttccgtgtc ttcatgagga
      241 acagaggaca tgtatgggtt ctgagtcctt ggagcttgaa agggccatca gttccctcca
      301 ggacatgggt tttgctgaag cccatattga cagcttgctc aatatacaac caagtgtcca
      361 tcctcaacag ttgctggaca taatttcaga acttctactc ttggggttga acccagagcc
      421 tgtatttatg gccttgaaga aaaatcccca gttgctgaaa ctgtctgcca cgcaaatgaa
      481 gaggcgttcc agttaccttc ggaagctcgg ccttggagaa gggaaactga agcgggtgct
      541 ttctgtttgc cctaaggttt tcaccatgcg tcagcaggac attgataata ttgtaaaagt
      601 cctcaaggag aagtgcttgt tcacagtaca gcacatcact gacattctgc acagatgccc
      661 agctgttttg caggaggacc ccagtgagct agaatacaaa ttccagtatg catatttcag
      721 gatgggactg acacatctag acatcgtcag gaccgatttc ctacagtatt caatagccaa
      781 ggtcaagcag agacacattt acttggagcg ccttggacgg taccaaaccc ctgataagaa
      841 ggggcagaca cagatcccta atccctcact gaagaacatt ctcagagttt ctgaagctga
      901 gtttttggcc aggacagcct gttcctctgc tgaggagttt gaagttttta aaaagctctt
      961 ggatcaagag gaggaggagt ctgagagcca tatgtctgag gaggaggagg aggaagagga
     1021 agaagaggag gaggagctgc cgtgacagag cactgggatg tcagaggtca ttctcatgtt
     1081 cctgaagcac tggggagctt cacctggatc ttctcaagca cttttgatcc caacactgtt
     1141 tgataaagga aaaaacaaaa aaacaaaaca aaacaaaaaa aaccccagcc aacctgcagt
     1201 gatctactgg agattcaggt aaatccacca aagcaaatga ggggcttttt gagttctgtg
     1261 gggggcccta ctccatccta aataaaggac tcagctgtca aaa
//
