LOCUS       XM_574098               1659 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mature T-cell proliferation 1 (Mtcp1),
            transcript variant X2, mRNA.
ACCESSION   XM_574098
VERSION     XM_574098.6
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_574098.7.
            
            On Jan 21, 2021 this sequence version replaced XM_574098.5.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1659
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1659
                     /gene="Mtcp1"
                     /note="mature T-cell proliferation 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     ESTs, 5 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 67 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:498814"
                     /db_xref="RGD:1561352"
     CDS             617..940
                     /gene="Mtcp1"
                     /codon_start=1
                     /product="protein p13 MTCP-1"
                     /protein_id="XP_574098.2"
                     /db_xref="GeneID:498814"
                     /db_xref="RGD:1561352"
                     /translation="MAREDTGAPPTRLWVHCEGVYRDEHQRTWVAAAEEDTATLKARV
                     RRVPVPLGDASKPRDLLTSPLPLMWQLYPEGRYMDNKSRLWQIRRHSVVRGAQELLLQ
                     LLPET"
ORIGIN      
        1 cggttcgtcc cgggatccct gcgcactcgt tgcttgagtg tccggtgtgg ggcgggggcg
       61 gcggcggtcg tgcgacccgg aagttttagc cgcgctgcgc cggaggcgga ggaatcactt
      121 ccggaaacgt cgtcttcctg ctggagaatc ctgacatgcg tgaacaaaca ccatgcgcca
      181 gaaaacgtgt tctgctcaca tacatgtagg acgggtgtga ggatcacgtg cgcagagacg
      241 acgacggtgc acccaacccg ggttacagcc tctaggggtc acagcgtcta ggggtcaccg
      301 taattcggaa tatccggggt agcagaggga gtgtagctca gtggtcggcc atggacagca
      361 gagcaccccg cgctgtctgc cccctcgcct accccagttt cgtttcccga caccgtaagc
      421 tgtcacgtga tgcgcccagg tcacgcgatc gatgcgcgtg aggcttgatt ccgccgcgcg
      481 gtcgcccatc ccgggtcgtg tgactcaata gggagttcat cctgacgtct cccagtcacc
      541 cccgtgtccc gcgcgcgcgg atgctgcagg ctcgggtgca ggagagcagg gcccggactc
      601 gaacccccag cccgggatgg cccgagagga cacgggggcc ccgcccaccc gactctgggt
      661 tcactgtgag ggtgtctacc gcgacgagca ccagcgcacg tgggtcgctg ctgcagaaga
      721 ggacacagcc accctaaagg ctcgggtccg gcgagttcca gttcctctgg gtgacgcttc
      781 gaagccccgt gacctcctga cctcaccgct gcctctcatg tggcagctct accccgaggg
      841 gcggtacatg gacaacaagt cccgcctctg gcagatccgg cgtcattcag tggtcagggg
      901 ggcgcaggag ctgctcctac aacttctgcc agaaacctga cccgctacac ggtttcactt
      961 ccgcttcctg gaacacgcgc gattgtactt ccgcttcaag ctgccgccca ccctgggcct
     1021 ccgggatggg gggaagggtg gggggaggag ggcaagagcg gagcttcgag ggaagggctg
     1081 tggagagcgc ggcgtcatca tcaccgggac aggttagcgc catgcgaggg caggggcaga
     1141 gtcagggccc ggaagtgacg cctttgggag cagccaccaa accctcaatg gacgccgatg
     1201 gcccaactcg cagcacctgg gacccggtcg tgattgacat ggaagagagc ggcatctgca
     1261 gggcccacgc gggtttccca ctcctggcgc cgagcgctca agggattctg ggagggaaag
     1321 acgagtcgca cctctgattg gcacctctct ttgattgaca cctctctcgt gaggccgtag
     1381 ccaccaacgt tgctgatcac tgggcaccgt ccgtgggaac tgtgaggaat ttcgggggtg
     1441 aaaacatgca cagcggttca ttcacatcga agtcgggttt tgctttttgg gataagtgtg
     1501 gggcccagag caatggtgcg gacctgaaat tccagctgtg tgggagacca ttgtgtgcac
     1561 tttgtatgtt gtgtgcactt tgtatgttgt gtgtactttg tatgttgtgt gtactttgta
     1621 tgttgtgtgc tatttgacta cactgaattt ttccatgaa
//
