LOCUS       NM_001419552            2256 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus male-specific lethal 3-like 2 (Msl3l2),
            transcript variant 1, mRNA.
ACCESSION   NM_001419552 XM_006256504
VERSION     NM_001419552.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            On Apr 7, 2023 this sequence version replaced XM_006256504.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643289.44161.1,
                                           SRR26643285.55864.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-165               JAXUCZ010000020.1  36011381-36011545
            166-266             JAXUCZ010000020.1  36012332-36012432
            267-2256            JAXUCZ010000020.1  36017540-36019529
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20q11"
     gene            1..2256
                     /gene="Msl3l2"
                     /gene_synonym="RGD1308699"
                     /note="male-specific lethal 3-like 2"
                     /db_xref="GeneID:309790"
                     /db_xref="RGD:1308699"
     exon            1..165
                     /gene="Msl3l2"
                     /gene_synonym="RGD1308699"
                     /inference="alignment:Splign:2.1.0"
     exon            166..266
                     /gene="Msl3l2"
                     /gene_synonym="RGD1308699"
                     /inference="alignment:Splign:2.1.0"
     exon            267..2256
                     /gene="Msl3l2"
                     /gene_synonym="RGD1308699"
                     /inference="alignment:Splign:2.1.0"
     CDS             594..1709
                     /gene="Msl3l2"
                     /gene_synonym="RGD1308699"
                     /codon_start=1
                     /product="male-specific lethal 3-like 2"
                     /protein_id="NP_001406481.1"
                     /db_xref="GeneID:309790"
                     /db_xref="RGD:1308699"
                     /translation="MATLGCAPKDDGEGKDEGGSDRGDGDPKPKGKKEVEAHTRREAD
                     ERAVRIPIPEVLQQRLADDCYYINRRRRLVRLPCQTNVGAILECYVRHFSASALASGD
                     RRPQPQRAAPERSVGLCREMADGLRITFDHALPLVLLYPQEQAQYEMVTSSTFFFPTE
                     ERASDAGRSQEAPWPGPSPPQPSESQAMAGPTAPKRRRVETDAARAPRRSTRHSTHCH
                     WQAEDRASPQAKRSVPKLFPHLQKTPVHSTALSPIALTPGKEGSAMFAGFEGTTEEIN
                     EILSWKLVPDNYPPGHQPPPPSYIYGAQHLLRLFVKLPEILGKMSFSEKNLKALLKHL
                     DLFLRFLAEYQADFFLESAYVSACEAHYSSKNPRTIC"
ORIGIN      
        1 gatgaatccg gtgaaaactg aaactggcaa gatactcaag gtccccacca ccctccaagg
       61 cttcaaaagc agtcaacaac tgggcctgag aaagaatggc ggttggctag gattcctgta
      121 gagagcggcc aggatgcagc tttcctgaat cctcaccata ctgaggtact cattttgtga
      181 tttagacgac gtgagtacat atatgaagag gagattataa atgacgaaat gggaaacact
      241 gcaattcccc agctgtggga aagcagtcat atagaggctg gtccctaaga aaaacgaact
      301 gaatttcaat tcgactcagg aagtgctgcg tttccagctt gaccgctgcc gcgttcacga
      361 gtgctgtgca gcgctgagat cgtcatatcg ttactgagga agacaaaact ggcagaaagt
      421 tccagactct ctgatccatt tgaatggctg agatgggagg tgacagcccg aaacctctgg
      481 ctccctggta caaatgaagt ctcaggttac agtgtgaacc agccagaaaa gcagcggcgc
      541 gctagagccg cccaggccag aggggcgagc ggggcccgtt gccggtgacg accatggcca
      601 cacttggctg cgctcctaag gatgacggcg agggtaagga tgaaggaggg agtgatcgag
      661 gcgatggcga cccaaagcct aaaggcaaga aagaagtgga ggcacacacg agacgggaag
      721 cggacgaacg ggccgtgcgc atccccatcc cggaagtgct ccagcagcgg ctggcggacg
      781 actgttacta catcaaccgc aggcggcggt tggtgaggct gccttgccag accaatgtgg
      841 gcgccatcct tgagtgctac gtgcgccact tctcggcaag cgcactggcc tcgggggacc
      901 gccggccgca gccccagcgc gcggcgccgg agaggagcgt gggcctgtgc cgagagatgg
      961 cggacgggct gcgcatcacc ttcgaccacg cgctcccctt ggtgctgctg taccctcagg
     1021 aacaggccca gtacgaaatg gtcacttcct ccaccttttt cttccccacc gaggaacgag
     1081 cgagcgatgc cggcaggagc caggaggcgc cctggccggg cccgtctccc ccacagccct
     1141 ccgagagcca ggccatggcg gggccaaccg cccccaagag gcgcagggtg gagaccgatg
     1201 ccgcgcgggc tcccaggcgg tccacccgcc acagcaccca ctgccactgg caggctgagg
     1261 accgggcctc gccccaggcc aagcgcagtg tgcccaagct gttcccgcac ttgcaaaaga
     1321 cacctgtgca cagcacagca ctttccccca tcgctctgac tcccgggaag gaagggagtg
     1381 ccatgtttgc tggctttgaa gggacaactg aggaaataaa cgagatcctg tcctggaagc
     1441 ttgtgccgga caactatccc ccgggacacc agccacctcc cccctcctac atttatggcg
     1501 cacagcattt acttcgactg tttgttaaac ttccagagat tcttggaaag atgtccttct
     1561 ccgagaagaa tctgaaggca ctactgaagc acttggatct ctttctgagg ttcttagcag
     1621 aataccaggc tgacttcttc ctggagtcag cttatgtctc tgcctgtgag gcgcattata
     1681 gcagcaagaa ccccaggaca atctgttaaa gttttaaagt ctctgcagtc ccacctggct
     1741 ctgtgttttg tgttctaggt tggcccacct tgggggagtg gggaccctga gagggggcag
     1801 gcttcagtat ttgagttgtt cacatactgc agttattttt gataacaagt acttcctgag
     1861 ctttgttttg ttttcttgcc tgtacggagg taaagttgct tcattagtta atttataaaa
     1921 atacatgcca ttgcactagc tgtatgtgag ggaacattca tgaaactata cataggttct
     1981 gctgttgtgg tagacatcac aagtggtcat taacgagagt tacactgttt agttttctta
     2041 gcatcaagca aaatgttttt gaagaccctt ctagtgtgat gagattgaag gactctgatc
     2101 agcatatatg agttcatatt tggacacatg gcaatctcaa attctgggga aaacaaacat
     2161 tgacagcaaa agagaatttg cagctataga atttgtaaaa gctccctttc tgtgaagcat
     2221 tatctttggt tgtctaaata aagcattttt gtctga
//
