LOCUS       NM_001417572            2738 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus Myb/SANT DNA binding domain containing 7
            (Msantd7), mRNA.
ACCESSION   NM_001417572
VERSION     NM_001417572.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643299.61585.1,
                                           SRR26643298.69907.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760389, SAMEA5760400
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-142               JAXUCZ010000017.1  79638088-79638229
            143-223             JAXUCZ010000017.1  79639634-79639714
            224-306             JAXUCZ010000017.1  79639798-79639880
            307-1034            JAXUCZ010000017.1  79641699-79642426
            1035-2738           JAXUCZ010000017.1  79642985-79644688
FEATURES             Location/Qualifiers
     source          1..2738
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17q12.3"
     gene            1..2738
                     /gene="Msantd7"
                     /note="Myb/SANT DNA binding domain containing 7"
                     /db_xref="GeneID:102547897"
                     /db_xref="RGD:7640129"
     exon            1..142
                     /gene="Msantd7"
                     /inference="alignment:Splign:2.1.0"
     exon            143..223
                     /gene="Msantd7"
                     /inference="alignment:Splign:2.1.0"
     exon            224..306
                     /gene="Msantd7"
                     /inference="alignment:Splign:2.1.0"
     exon            307..1034
                     /gene="Msantd7"
                     /inference="alignment:Splign:2.1.0"
     CDS             473..1558
                     /gene="Msantd7"
                     /codon_start=1
                     /product="zinc finger and SCAN domain containing 29"
                     /protein_id="NP_001404501.1"
                     /db_xref="GeneID:102547897"
                     /db_xref="RGD:7640129"
                     /translation="MATANSSAGIRWSRQETRTLLSILGEAEYIQRLQTVHHNADVYR
                     AVSKRMQQEGFRRTERQCRSKFKVLKAMYLKACVAQATSLGGPPHCPFYDILDQLLRN
                     QTVTDPDNLMEATAWAKHCDRDLVASDKPGDEGASVQEAKRTQAACHRRVLQTVKESD
                     EDCQLRISDGMDEASDIEDSWDESSGAGCSQGTLNYSSSHHLFKGAVAPCQSRPMTRL
                     AVSRESSPCTSTSRIPLGAASTPHPPGSSSRVAFLSGEDRPLISEPSPRCTRQRKRSV
                     ARTIATELAENRRLARELSSREEEKLDRLIAIGEEASAQQDTANELRRDAVTAVRRLA
                     TAVEEATGAFQLGLEKLLQRLISNTKS"
     exon            1035..2738
                     /gene="Msantd7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcagtgcctg atgggcttgt tccaggccgg ctagctacgg ctgctgaagg gcccgtcgtt
       61 gagctgcctt ggtcaccgcc gccttatggc ggcgatcggc gtgcacctgg gctgcacatc
      121 agcctgtgtg gctgtctaca aggatggccg ggccgatgtg gttgcaaatg atgcggggga
      181 cagagtcacg ccagccgtcg ttgcttactc ggaacgtgaa caggtggttg gactggcggc
      241 aaaacaaagt aggataagga atatctcaag cacggtagtg aaagtaaaac agatccttgg
      301 cagaagccag aagtgtggtc ctcggacccg tcttctcagc agtgagccct gggagggaag
      361 aacccgctgg ctcctagaaa tttgctgaga acacgcagac ctcccccacg ccttcaaaac
      421 tgtgccctgc tgcccaggag cctatttcag tagcctccct tccctgcctg atatggccac
      481 cgccaatagc agtgcaggca tccgttggtc cagacaggag actcgaactc ttctctccat
      541 actgggcgag gcggagtata tccagcgcct ccagactgtg catcacaatg cggacgttta
      601 tcgggctgtg tctaagcgaa tgcagcagga gggcttccgc cgcaccgaac gccagtgccg
      661 ctccaagttt aaagttctga aggcaatgta tttaaaggcc tgtgtggccc aggccacaag
      721 tctggggggt ccaccgcact gcccgtttta tgatatattg gatcagcttc ttcgaaatca
      781 gacggtaact gacccagaca acttaatgga ggccaccgct tgggccaagc actgtgatcg
      841 ggatttagtg gcctctgaca agccagggga tgagggagcc agcgttcagg aagcgaaaag
      901 gactcaggca gcttgtcatc ggcgtgtttt gcaaacagtg aaggagtcgg atgaggattg
      961 ccaactgagg atcagtgatg ggatggacga agccagtgac attgaggact cctgggatga
     1021 atcctcaggt gcagggtgct ctcaagggac cctcaactac agcagctccc accacctttt
     1081 caaaggtgca gtagctccct gtcagagccg ccccatgacc agactggctg tgtcgaggga
     1141 atccagtccc tgcaccagca ccagccgaat cccccttggg gcagcctcca caccacatcc
     1201 tcccggttcc tcctcaaggg ttgcttttct ctctggtgag gatagacctc tgatcagcga
     1261 gccctctcca aggtgcacaa ggcagagaaa gcgctcggtg gccagaacca ttgccactga
     1321 actggcagaa aacaggaggt tggcacgaga actctccagc agagaggaag agaagctgga
     1381 caggttgatt gccattggcg aggaggccag tgcccagcaa gacaccgcca atgagctgcg
     1441 cagggatgct gtcacggctg tcagacgcct ggcgacagcg gtggaagaag caacgggtgc
     1501 tttccagcta gggcttgaga agttgcttca gagactgatc tcaaatacca aaagctagga
     1561 gctgggagtg gatacatttc ccaaactggt acaaggctat ttctaacaag ctccttctgg
     1621 aaccctggct ccttgtctgt gtcttcagga gagaaagaac agatgagctg ttaatacgca
     1681 gaagagttcc ttgtcctcag gttctccact aatggaaagg tttcgttcca aagagcagac
     1741 cagtagaaac cagaaggaac cgaatccatg agctagcttg tcctggcttc ctcaccgggt
     1801 ggggcaattt tctttacctc tatcatggtc tcctcatctc tcgaggcaga cctgccctgc
     1861 ctacctcaca gggttgttgt gaggatcaag tggcttatag atgtgaaaag gttttaaagt
     1921 ttgaaagcac tatacacatg taagttatta atgcattgcc cttggctacg gggagctggg
     1981 gcaagcacgt tcgtttataa cacacacaag tgtagcggtg cccccgacct cattgcctga
     2041 acctttacat gtttaattta ctgtcttttt aggttgaggt ctcagcttct tacacctctc
     2101 tgtggctcac tagtctggtc acgactgcgt ttgtgtcttt gtgtcttaca gttccactgc
     2161 tctatccctg acctgcctac taacaagccc tcgtagtcca accagctaac ccccttcatt
     2221 ttactacttc ctggcctctg tagagatgag cttctagttg agtgctgtgg gcggtagatc
     2281 ttgatgaggt aaaacagtga cagttttatg aagtagaaag gacgagtaag ttctttgcag
     2341 ttcatataac tgaggctctt gaaatgccta aattgtgtgt ttacactgtg gttgccattt
     2401 gaacatggaa ataacctgga ttaacgcatt tgcatcaatc catctccaat ctgcttgtgg
     2461 ctgatggcct ttgtttgtac tagccggtgt ttcgtttggg cactgacatg ttactaaggg
     2521 caagcctagg tccagagtgg taactttatt taagtgatga aaacgggagt tggtagggtc
     2581 agtggctatg atcaaagaga gcagctagcc tttgccctta agcctggaga actgtagagg
     2641 cctctaccca gagatagttc tctttaagca caagccccaa gcaagcacac tcccttgact
     2701 gaggcacacg tccttgcggg gaggtggtga cactaaac
//
