LOCUS       NM_001410291             981 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus membrane spanning 4-domains A7 (Ms4a7), mRNA.
ACCESSION   NM_001410291 XM_008760256
VERSION     NM_001410291.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 981)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Aug 3, 2022 this sequence version replaced XM_008760256.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.558267.1,
                                           SRR26360172.1320206.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-89                JAXUCZ010000001.1  217409555-217409643 c
            90-312              JAXUCZ010000001.1  217406681-217406903 c
            313-438             JAXUCZ010000001.1  217401576-217401701 c
            439-495             JAXUCZ010000001.1  217400133-217400189 c
            496-702             JAXUCZ010000001.1  217398762-217398968 c
            703-804             JAXUCZ010000001.1  217394842-217394943 c
            805-981             JAXUCZ010000001.1  217394019-217394195 c
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..981
                     /gene="Ms4a7"
                     /note="membrane spanning 4-domains A7"
                     /db_xref="GeneID:293744"
                     /db_xref="RGD:1305549"
     exon            1..89
                     /gene="Ms4a7"
                     /inference="alignment:Splign:2.1.0"
     exon            90..312
                     /gene="Ms4a7"
                     /inference="alignment:Splign:2.1.0"
     CDS             166..843
                     /gene="Ms4a7"
                     /note="membrane-spanning 4-domains, subfamily A, member 7"
                     /codon_start=1
                     /product="membrane-spanning 4-domains subfamily A member
                     7"
                     /protein_id="NP_001397220.1"
                     /db_xref="GeneID:293744"
                     /db_xref="RGD:1305549"
                     /translation="MGLRLGTKITAWDCFPKDVIVHKREKAGHTYENGEDLLIGVPSE
                     ATVLGTIQLICALMIASFGGILVSASYSNPEASTTLMSGYLFTGSFCFAMAGILSIIS
                     EKISTKAFALSSLASSVASSVVAMIGLFFVTYCLIVLGTAFPHCNSEKKFLPLLSYLE
                     SHDWKNEDKNCRLAYVSAISTLGIMLLFIVLEVLLAVYSSIFWWKQVYSNKPGGAFFL
                     PQSQDHP"
     exon            313..438
                     /gene="Ms4a7"
                     /inference="alignment:Splign:2.1.0"
     exon            439..495
                     /gene="Ms4a7"
                     /inference="alignment:Splign:2.1.0"
     exon            496..702
                     /gene="Ms4a7"
                     /inference="alignment:Splign:2.1.0"
     exon            703..804
                     /gene="Ms4a7"
                     /inference="alignment:Splign:2.1.0"
     exon            805..981
                     /gene="Ms4a7"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctggtgaa aggttgagcc tgagttctcc caggagcaga gtgagcaggc gcaggagcta
       61 caacatacac cacagggctg tgaggacaga ctctcgtgcc tgtgagtgtc ggtgagtcaa
      121 accctgggga ctgagtccag tgcctcttct agcgtccttg gcatcatggg tcttcggctt
      181 ggcaccaaga tcactgcgtg ggactgcttt ccaaaggatg tcattgtcca caaaagagag
      241 aaagctggac acacatatga aaatggagag gacctgctga ttggtgtacc tagtgaagcc
      301 acagttcttg ggactatcca gctaatatgt gccctgatga ttgcaagctt tgggggaatt
      361 ttggtgtcag cttcctactc caacccagaa gcttccacca ctttgatgtc tggatacctg
      421 tttactggat ccttctgttt tgccatggct ggaattctct ccatcatctc tgagaaaatc
      481 tcaaccaaag cctttgcact gagcagcctg gcctccagtg tagcaagctc tgttgttgct
      541 atgatcggtc tcttcttcgt cacctattgc ctgatagtcc tggggactgc ctttccacac
      601 tgtaactcag aaaagaaatt cctgccctta ttgtcttatt tggaatccca tgattggaag
      661 aatgaagaca agaactgtcg cctggcttat gtcagtgcta taagtactct ggggatcatg
      721 ctcctcttca tcgtgctgga agttttgcta gctgtataca gttctatctt ttggtggaag
      781 caagtctact ccaacaagcc tgggggtgca tttttcttgc ctcaatcaca agatcatccc
      841 taacttgtca aaagcagttt gttgcagtaa tggatatgaa atacagaaga agaaagaaga
      901 aatctagtgc ttgtggcaga gcacagctag actttcctga aatctcaacc ttggtagatc
      961 ctaataaaca tctgaagaaa a
//
