LOCUS       XM_006231110            1007 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus membrane-spanning 4-domains, subfamily
            A, member 6B (Ms4a6b), transcript variant X1, mRNA.
ACCESSION   XM_006231110
VERSION     XM_006231110.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231110.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006231110.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1007
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1007
                     /gene="Ms4a6b"
                     /note="membrane-spanning 4-domains, subfamily A, member
                     6B; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 89 ESTs, 1 long SRA read, 11 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 118 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:293750"
                     /db_xref="RGD:1311761"
     CDS             174..917
                     /gene="Ms4a6b"
                     /codon_start=1
                     /product="membrane-spanning 4-domains subfamily A member
                     6B isoform X1"
                     /protein_id="XP_006231172.1"
                     /db_xref="GeneID:293750"
                     /db_xref="RGD:1311761"
                     /translation="MIPQVVTNETITVISPNRINFPQTEEPQSTHQRQDSLKKLLKAE
                     IKVMAAIQIMCAVMVLALGIILASVPSVPLFTSVFSVLLKSGYPFVGPLFFIVSGILS
                     IITETKSTKTLVDGSLTLNILSVSFAFMGIIIMSASLAGLHPASEQCKLSKEGIRNEH
                     DYYELSYDSDKKKCSTDKSILTGVFSLMLISTVLELGLAVLSALLWWKQSRSDSPGNV
                     IFLSHNSNDESNVESKALCNSAYEEQMVC"
ORIGIN      
        1 accacttcct gtgcagtgag acagaaggaa gggctgggga cagttagaag ttcacaagta
       61 gcaaacaaag atcagactga aagaagccag agttaagctg ttagggttcc tcggagctca
      121 gctggaagtg actggatgac aaggcgcgca aactcagctg tgggaatgcc atcatgattc
      181 cacaagtagt gaccaatgag accatcacag tgatttcgcc aaatagaatc aactttcccc
      241 aaacagagga accccagtct acccaccaga ggcaagacag cctgaagaaa cttctaaagg
      301 cagagatcaa agtgatggcg gcaatccaga tcatgtgtgc tgtgatggtg ttggctctgg
      361 gaatcattct ggcatcagtt ccctctgtcc cactttttac gtcagtgttt tctgtcctgt
      421 taaaatctgg atacccattt gtaggacctt tgttttttat tgtttctgga attctgtcca
      481 tcatcacgga gacaaagtca acaaaaactt tggtagatgg cagcctgact ctgaacatcc
      541 tgagtgtttc atttgctttc atgggcatca ttatcatgtc tgccagcctg gctggtttgc
      601 atcctgcctc agagcagtgc aagctgagca aggaaggtat acgaaatgaa catgattact
      661 acgaactttc ctatgactca gacaagaaaa agtgctccac tgacaaatct attctgactg
      721 gggtcttttc actgatgctg atcagtactg tattggagct tggcctggcg gtcctcagtg
      781 ctctgctttg gtggaaacag agtcgctctg actcccctgg gaatgtgatt ttcctgtctc
      841 ataactcaaa tgatgaatcc aatgtggaat caaaggcact ctgtaactct gcatatgagg
      901 aacaaatggt ttgttaagaa aaacaaaaca gaacaaaatt ccccaaaaca agtgggaact
      961 aaacagcaga gggtatgtct tcttgataat gcagaaaata caatcat
//
