LOCUS       NM_001408781             704 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus membrane spanning 4-domains A5 (Ms4a5), mRNA.
ACCESSION   NM_001408781 XM_003749066
VERSION     NM_001408781.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 704)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Jun 27, 2022 this sequence version replaced XM_003749066.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: MK364793.1, SRR26643293.8008.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-229               JAXUCZ010000001.1  217359510-217359738 c
            230-358             JAXUCZ010000001.1  217357852-217357980 c
            359-415             JAXUCZ010000001.1  217356466-217356522 c
            416-568             JAXUCZ010000001.1  217354283-217354435 c
            569-704             JAXUCZ010000001.1  217351959-217352094 c
FEATURES             Location/Qualifiers
     source          1..704
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..704
                     /gene="Ms4a5"
                     /note="membrane spanning 4-domains A5"
                     /db_xref="GeneID:686680"
                     /db_xref="RGD:1594968"
     exon            1..229
                     /gene="Ms4a5"
                     /inference="alignment:Splign:2.1.0"
     CDS             77..673
                     /gene="Ms4a5"
                     /note="membrane-spanning 4-domains, subfamily A, member 5"
                     /codon_start=1
                     /product="membrane spanning 4-domains A5"
                     /protein_id="NP_001395710.1"
                     /db_xref="GeneID:686680"
                     /db_xref="RGD:1594968"
                     /translation="MDSKNVHSPVFLVFPPEIITSEYRTAEFTATAYDSQNQVQKILI
                     RKLKILGTTQILFGIMNFSFGVVFLFTLVNPYPRFPFIFLSGYPFWGSALFINSGAFL
                     IALKRKTTDTLIKMSQAMNLLSALGAAAGIILLIFAFLLDGEFICGYSPDGIQCGAIT
                     TLFVGILIMLMIFSVAELFISLFSSILGCYSEESGGCC"
     exon            230..358
                     /gene="Ms4a5"
                     /inference="alignment:Splign:2.1.0"
     exon            359..415
                     /gene="Ms4a5"
                     /inference="alignment:Splign:2.1.0"
     exon            416..568
                     /gene="Ms4a5"
                     /inference="alignment:Splign:2.1.0"
     exon            569..704
                     /gene="Ms4a5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caggaaacga agatgattta aatgggagta ccagctacat ccttttcttc cacttgaaaa
       61 aaccaactat accatcatgg attcaaaaaa tgtgcatagt cccgttttcc tggtgtttcc
      121 tccagagatc atcacttcag agtaccgaac agcagaattt acagccacag cctacgattc
      181 ccaaaaccaa gtgcagaaaa tccttatcag aaaattgaag atcttaggga ccacccagat
      241 cctgtttgga atcatgaact tctcatttgg agttgttttc cttttcacct tggtaaaccc
      301 atacccaagg ttccctttta tatttctctc aggatatcct ttctggggct ctgctttgtt
      361 cattaactct ggggcctttc tgattgctct gaaaagaaaa actacagaca ctctgataaa
      421 aatgagccag gcgatgaatt tacttagtgc cctgggagca gcagctggaa tcattctcct
      481 catatttgct ttccttctag atggagaatt catctgtggc tattctccag atggtattca
      541 gtgtggtgct attaccactc tatttgttgg gattttgatt atgttgatga tcttcagcgt
      601 tgctgaactg ttcatttccc tcttttcctc gattttgggg tgctactcag aagaaagtgg
      661 gggatgctgt tgaatagcac tgtacaagta aaactgcaaa atga
//
