LOCUS       NM_001106339            1104 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus membrane-spanning 4-domains, subfamily A, member
            4C (Ms4a4c), mRNA.
ACCESSION   NM_001106339 XM_001075351 XM_219594
VERSION     NM_001106339.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1104)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000046.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001106339.3.
            
            On Oct 13, 2022 this sequence version replaced NM_001106339.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMN06680422,
                              SAMN06680423 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               JACYVU010000046.1  1951916-1952022
            108-267             JACYVU010000046.1  1961526-1961685
            268-387             JACYVU010000046.1  1963451-1963570
            388-444             JACYVU010000046.1  1966978-1967034
            445-570             JACYVU010000046.1  1968311-1968436
            571-672             JACYVU010000046.1  1970228-1970329
            673-1104            JACYVU010000046.1  1972744-1973175
FEATURES             Location/Qualifiers
     source          1..1104
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1104
                     /gene="Ms4a4c"
                     /note="membrane-spanning 4-domains, subfamily A, member
                     4C"
                     /db_xref="GeneID:293746"
                     /db_xref="RGD:1583863"
     exon            1..107
                     /gene="Ms4a4c"
                     /inference="alignment:Splign:2.1.0"
     exon            108..267
                     /gene="Ms4a4c"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..804
                     /gene="Ms4a4c"
                     /codon_start=1
                     /product="membrane-spanning 4-domains, subfamily A, member
                     4C"
                     /protein_id="NP_001099809.1"
                     /db_xref="GeneID:293746"
                     /db_xref="RGD:1583863"
                     /translation="MQGLAQSTTAVVPGGTQPSEPSVIKSQRWNENKEKFLKGEPKVL
                     GVVQVMIALINLSLGVIVMKTMGFGSLISVALQAPIWGPVMFIVSGSLSIAAGVKTTK
                     SLVISSLSLNTISSVLAAAASIMGVVSVVLSTYSFLYGSDPITRALDVLMLILNILEF
                     CIAVSISAFGCKASCCNSSEVLVVLPSNPPVTVMAPSIPLQPLLPPECQGKNVPENVY
                     PGEIV"
     exon            268..387
                     /gene="Ms4a4c"
                     /inference="alignment:Splign:2.1.0"
     exon            388..444
                     /gene="Ms4a4c"
                     /inference="alignment:Splign:2.1.0"
     exon            445..570
                     /gene="Ms4a4c"
                     /inference="alignment:Splign:2.1.0"
     exon            571..672
                     /gene="Ms4a4c"
                     /inference="alignment:Splign:2.1.0"
     exon            673..1104
                     /gene="Ms4a4c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aatcgactta tctgacatct acaaaggtgg atcagcatcc tgtgaaaaca cacaagcaaa
       61 gcttctcctg ggataaatca tctgacatca gatccttcca ttgtctgtac tgtgtctgct
      121 gccctggaaa ccatgcaagg actggcacag agcaccacag cagtggttcc tggaggaact
      181 cagccctcgg agccatctgt tataaaatca caaaggtgga acgagaacaa agagaagttc
      241 ttgaaggggg aacccaaagt cttaggggtg gtacaagtta tgattgctct cataaacctc
      301 agcttaggag taatagtaat gaaaactatg ggttttggat cactcatttc agttgcctta
      361 caagccccaa tttggggacc agtaatgttc attgtctccg gatccctgtc aattgcagca
      421 ggagtgaaaa cgacaaagag cctggtcatc agcagtctaa gtctgaacac tatcagctct
      481 gtgttggctg cagctgcaag cataatgggt gttgtcagtg tggttttgag tacatattct
      541 ttcttatatg gtagcgatcc aatcaccagg gctttggatg ttttgatgct aattttaaat
      601 atactagaat tctgcattgc tgtgtccatc tctgcatttg gatgtaaagc ttcctgttgt
      661 aactctagtg aggttcttgt agtgctacca tcaaatcctc ctgtgacagt gatggcgccc
      721 tccataccac ttcaaccatt gctaccacca gagtgccaag gaaaaaatgt tccagaaaat
      781 gtatacccag gagaaatagt ctaattttga tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
      841 tgtgtgtgtg cgcatgtgtg tgtgtatgca tttctctagg aaattaacac ttcattgtac
      901 tgaattttgg aggaatatca gacatggtat aaacatgaaa gtcaaacatt attatgtcaa
      961 caaaacttta acatcctcta ttcattgtag gtacaagggg caatgcattg gcaaagaagt
     1021 tttgaaagca aaactgaaaa aacaaagacc tgtgttagtc aaatgagata cctttgcaaa
     1081 gaataaagac tggagtttac tttt
//
