LOCUS       XM_039098095            2043 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus membrane spanning 4-domains A18
            (Ms4a18), mRNA.
ACCESSION   XM_039098095
VERSION     XM_039098095.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098095.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 2% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2043
                     /gene="Ms4a18"
                     /note="membrane spanning 4-domains A18; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 2 Proteins, and 89% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:100359485"
                     /db_xref="RGD:2323808"
     CDS             48..1121
                     /gene="Ms4a18"
                     /codon_start=1
                     /product="membrane-spanning 4-domains subfamily A member
                     18"
                     /protein_id="XP_038954023.1"
                     /db_xref="GeneID:100359485"
                     /db_xref="RGD:2323808"
                     /translation="MSNQENVSAVTVTVPGNVRAIQPTYAVVSGGQEQPLQKATMHPA
                     SATVLQCNPGSANFQNPHVVIQNPAGMTGLQARPTGLQYPAGMASVQTAPGVIQYSPE
                     MTSVQILPGDPQNPLNTVPGPTQTSSHPQWNMSFMSFPEFNPKKFINEEVRTLGAIQI
                     LIGLFHVFSAFNPHIYWNFSVLGASGYLIWGGLSFIISGSLSVLAEKDTNSCVVNSSI
                     GMNVISSIFSLTGILVIIIDLCFPTPGISFLMSTLKTEMPPFPLCSMKVTSGILLPFA
                     LLEFILTCVVSHFGCQAVCWPHFENMTVFPTMFGGNTVNTTTGPVSTTSPNSATNIPV
                     QPTLPSDVPPEQLYHDVADHAQK"
ORIGIN      
        1 ttttcagtgg aaattgtatc ttgtgtgttt tgtagcagct gtgcgtcatg agcaaccaag
       61 agaatgtgtc tgctgtcact gtcactgtcc caggcaatgt ccgtgccatc cagcctacat
      121 atgctgtggt ctctggagga caggaacagc ctttgcaaaa ggccaccatg cacccagcct
      181 cagcaacagt gctccagtgt aacccaggga gtgcaaactt ccagaaccca cacgttgtga
      241 tccagaatcc agctggaatg acaggcctgc aggctagacc cactggacta cagtatccag
      301 caggaatggc tagtgtgcag actgccccag gagtaatcca atactcacca gaaatgacaa
      361 gtgtccagat cctacctgga gaccctcaga atcccctgaa cactgtccct gggccaacac
      421 agacctcaag ccatccccag tggaacatgt cctttatgtc ctttcctgaa tttaatccca
      481 agaaattcat aaatgaagag gtcagaacgt taggggccat ccagatcctc attggtctat
      541 ttcatgtatt ctctgcattc aaccctcaca tatactggaa tttttctgtg ctgggggcat
      601 caggatacct gatctgggga ggcctgtctt ttatcatctc tggatctttg tcagtcttgg
      661 ctgaaaagga taccaacagt tgcgtggtga acagcagcat tggcatgaac gtcatcagtt
      721 ccatcttctc cttgactgga atcctcgtta tcatcataga tttgtgtttt cccacccccg
      781 gtattagttt tctgatgtca accctgaaga ctgaaatgcc tccatttcct ctctgttcta
      841 tgaaggtaac ctctggtatt ctccttcctt tcgccctcct ggaattcatc ctcacctgtg
      901 tggtctcaca ttttggatgc caggctgttt gctggcccca ttttgagaac atgacagtgt
      961 tcccaaccat gtttggtggc aacacagtca acacaaccac tggacctgtc agcaccacca
     1021 gcccaaacag tgccaccaac atcccagtcc agcccaccct gcccagtgat gttccccctg
     1081 aacagttata ccacgatgta gctgatcatg cccagaaata gttgacagaa tcgctgatag
     1141 aatgctcatt tcaatgacaa ggaagccctg ctataacagt atctttgttt caccatgaaa
     1201 cacctgtgac cttgaccttg gcattgcctc taggccaaga tgaacatcca ttttttgcac
     1261 ctcttcactc ataggcttcc ctttggtttg ttattgattg tgctttttta attcataacc
     1321 gtttttccct ttgactcttg gtatctttta actttttaag gaactgtgta caatgttgcg
     1381 tcctgtgttc agttgcttct gttgaatgct tattgttgga agccaattct aaactaatag
     1441 gccaactgtg ggttcagcct ctaatttccc tcccccaact ctaatcctgt aaggtaattc
     1501 cccttaccca tggaacatga ggagaagcac aaaaagtatg gactgcctaa ccctggtgtg
     1561 tgtccccagc acttctgggt gtgtgtgagt gggaccccaa atggacacca gacagcctgc
     1621 tggagctgga acaaaaaagc cactcaagcc caaggaaaag agctgtctga gtcgggcaat
     1681 ggtagagatg caaacttcac agggcaaata ggaagggacc tctcaagggt gagagcagga
     1741 tgagagcaac tccattaagt acccgggaca ctatgtattt cccagcaaag tgttacaaac
     1801 aattgtatga gcagaattga cagattcggc catatccaaa gaacaggcaa agacaaggat
     1861 catttagcaa gagggagatc tgaccgtact ggccaaatca ctggcttatg ggctacatga
     1921 acctgcagag gatctgggag gtaaggctgg gtactgtgaa cactccagca tctccagcat
     1981 ctccagcttc tcctgttctc ctgttgtttg ttttgttgaa gtaaaggtaa ttttagagga
     2041 caa
//
