LOCUS       XM_006231105            1371 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus membrane spanning 4-domains A13,
            pseudogene 1 (Ms4a13-ps1), transcript variant X2, mRNA.
ACCESSION   XM_006231105
VERSION     XM_006231105.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006231105.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006231105.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1371
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1371
                     /gene="Ms4a13-ps1"
                     /note="membrane spanning 4-domains A13, pseudogene 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:499319"
                     /db_xref="RGD:1564175"
     CDS             323..847
                     /gene="Ms4a13-ps1"
                     /codon_start=1
                     /product="membrane-spanning 4-domains subfamily A member
                     13 isoform X1"
                     /protein_id="XP_006231167.1"
                     /db_xref="GeneID:499319"
                     /db_xref="RGD:1564175"
                     /translation="MGCRNSKISSANTAVLGVIQIMIGIYHVLMWYFLLLLYMGQIKG
                     VFGTYEPLTYKMGTSLWGLTFVLSGAFTIKAAKYRSRFMLLCTMSLNILCIIVTIIAA
                     SLTIVELSHFRSVSYRNYGQAKLGREVSRILLCSYPLEFVVALTYSISGCAYLMETQD
                     ENSESVTEVVEDNF"
ORIGIN      
        1 gagggctgtt gcccttgaca acccggaagg cttgaggagc ttgacaacca cctgggagct
       61 agactgggtg ctgctgcctc tgatggcaat gcagccaggt ctagcgctga gaacaccatc
      121 caccgtgatc cttctcttca gcctagacct gggcctgata gggtgaacct ggatccttgg
      181 gactggtgaa atgcgaggtg acagcgtgcc tctttacttt tgctaagcaa agaaatggac
      241 actctttgga gaaagggaag tttggtaata aagatatcac cgaagattag aaacaaaatc
      301 aaccagagga aattctgaaa gtatgggatg tagaaattca aaaatatctt cagcaaacac
      361 cgctgtttta ggggttatcc agattatgat tggtatctat catgtactca tgtggtattt
      421 cctattgctg ttgtatatgg gacaaattaa aggagtattt ggaacttacg aacctttaac
      481 ttacaaaatg ggaacttctt tatggggact tacttttgtc ctttcaggag ccttcacaat
      541 aaaagcagca aaatatcgaa gtagatttat gcttctctgt actatgtccc tgaacattct
      601 ctgcataatt gttacgatca ttgcagccag cctaacaata gtggaattgt ctcatttccg
      661 ttctgtgtca tatagaaatt atggacaagc aaagctggga agggaagtct cccgcatttt
      721 gctgtgctct taccccctgg aatttgtggt cgccctcaca tattccatct ctggttgtgc
      781 atatttgatg gaaacacaag atgaaaattc agaaagtgtt actgaagtag tagaggacaa
      841 cttctgaaaa cagaagacgt gagcaagttt catgaccact aacacctgat gtaggtgccc
      901 atgatattcc catataacag ggctactgca caccccatac attttgtgca aaaggaaatt
      961 cacagcaagg tgaaagttac cccttggtat ttaagaagtg tctatgcaca tatattctag
     1021 gttccagagg agaaagctca tccctatgta agtatgaggc catcgcaaga aagcatttgc
     1081 tagctagcca ctccgaagag ctgtcaactc tccccagcag atcatctgca gttgaccaga
     1141 aaaaccactt gaaacctgta gagtgcaggc tatgagattt ggggtacaat gtgcaattca
     1201 gaggaaaact aatttctttc cctgtgagtg aaaagcacat tccatgttct gcattcttct
     1261 gctcaagcta gcttctacct ccacaaagca aggctcaaag ggtcaccaat ttaatgcctt
     1321 tattgtccca aggcattctc tgtcctcatt aaagttcctt tctgccctgc a
//
