LOCUS       XP_038942937            1111 aa            linear   ROD 22-FEB-2024
DEFINITION  myocardin-related transcription factor B isoform X1 [Rattus
            norvegicus].
ACCESSION   XP_038942937
VERSION     XP_038942937.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_039087009.2
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086028) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1111
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..1111
                     /product="myocardin-related transcription factor B isoform
                     X1"
                     /calculated_mol_wt=120341
     Region          73..97
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          117..140
                     /region_name="RPEL"
                     /note="RPEL repeat; pfam02755"
                     /db_xref="CDD:460677"
     Region          160..185
                     /region_name="RPEL"
                     /note="Repeat in Drosophila CG10860, human KIAA0680 and C.
                     elegans F26H9.2; smart00707"
                     /db_xref="CDD:128947"
     Region          209..>282
                     /region_name="NDFIP-like"
                     /note="NEDD4 family-interacting protein; cl10870"
                     /db_xref="CDD:415965"
     Region          415..448
                     /region_name="SAP"
                     /note="SAP domain; pfam02037"
                     /db_xref="CDD:460424"
     Region          583..>624
                     /region_name="DUF2130"
                     /note="Uncharacterized protein conserved in bacteria
                     (DUF2130); pfam09903"
                     /db_xref="CDD:430914"
     CDS             1..1111
                     /gene="Mrtfb"
                     /gene_synonym="Mkl2; RGD1560833"
                     /coded_by="XM_039087009.2:399..3734"
                     /db_xref="GeneID:100362470"
                     /db_xref="RGD:1560833"
ORIGIN      
        1 mdhrgaldte eelgplahla pspqseavah efqelslqss qhlptlnerk ngsivfgesg
       61 lqlplpaqsv stvlqlklqq rrtreqlvdq gimpplkspa afheqiksle rartenflkh
      121 kirsrpdrse lvrmhileet faepslqatq mklkrarlad dlnekiaqrp gpmelvekni
      181 lpvdssvkea iigvvkedyp hthgefsfde dssdalspdq pasqesqgsa aspsepkvsa
      241 spppvtastp vqftsvspav peflkspvdq pptrstasvl ptntvssaks gptlvkqshp
      301 knpndkhrnk kckdpkprvk klkyhqyipp nqkgekseph mdsnyarllq qqqlflqlqi
      361 lsqqqqqqqq qhynyqtilp apvktdknss ssssssssss tgvparrpgp lpsslddlkv
      421 selktelklr glpvsgtkpd lierlkpyqe vtsnnlatgs ivavssaaiv tsnpevtvtl
      481 pvttlhnavt nsvstfkadl ppsgsssvph venahsplpi spspseqssl stddtnmtdt
      541 fteimtmmsp sqflcssplr vashedslsp tsstlstlel daaekdrklq ekekqieelk
      601 rkleqeqklv evlkmqleee krgqqrppgp qpngsthpft sdlklgnvrs svkdetslpd
      661 csspqqsipv pghsvgqpis tgsqtlvakk avvvkqevpm aqteqqnvvs qfylssqgqp
      721 pafvaqpqal lttqttqlll pvsiqgsnvt svqlpvgslq lqtpaqggvq aqpqvaaatq
      781 vpaaalpsal asalpqkqea fpqhvlvqpq pvrkvftnsa pntvlqyqrq pgpatpqpfv
      841 sktsnpavqs rstplvplqn gpgpaskpss ppppqqfvvq hslfatpvtk tkdppryeea
      901 ikqtrstqsa lpevssvhsq qmddlfdili ksgeisfpik ekpspiskmk pvtasittmp
      961 vntvvsrppp qvqiappvsl epvnslsasl enqleafldg alpsandiap lqgssedrep
     1021 lsliedlqnd llshssmlyq shspmetsea qfvsgtpcls ldlsdpnldn mewlditmpt
     1081 tssgltplst tspsmfstdf ldpqdlplpw d
//
