LOCUS       NM_001008354            3602 bp    mRNA    linear   ROD 20-SEP-2024
DEFINITION  Rattus norvegicus mitochondrial ribosome recycling factor (Mrrf),
            mRNA; nuclear gene for mitochondrial product.
ACCESSION   NM_001008354 XM_231177
VERSION     NM_001008354.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3602)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 3602)
  AUTHORS   Tsuboi,M., Morita,H., Nozaki,Y., Akama,K., Ueda,T., Ito,K.,
            Nierhaus,K.H. and Takeuchi,N.
  TITLE     EF-G2mt is an exclusive recycling factor in mammalian mitochondrial
            protein synthesis
  JOURNAL   Mol Cell 35 (4), 502-510 (2009)
   PUBMED   19716793
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085779.1.
            
            On Dec 16, 2004 this sequence version replaced XM_231177.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085779.1, SRR8487230.157014.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132267
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p11"
     gene            1..3602
                     /gene="Mrrf"
                     /note="mitochondrial ribosome recycling factor"
                     /db_xref="GeneID:311903"
                     /db_xref="RGD:1305897"
     exon            1..21
                     /gene="Mrrf"
                     /inference="alignment:Splign:2.1.0"
     exon            22..233
                     /gene="Mrrf"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..838
                     /gene="Mrrf"
                     /note="ribosome-recycling factor, mitochondrial; RRF;
                     ribosome-releasing factor, mitochondrial"
                     /codon_start=1
                     /product="ribosome-recycling factor, mitochondrial
                     precursor"
                     /protein_id="NP_001008355.1"
                     /db_xref="GeneID:311903"
                     /db_xref="RGD:1305897"
                     /translation="MALGIRCFRLLHPAFSSYLADLSRPVSEVPMKTVRGRQRDHIQY
                     SAHPAVPVRQFATKKAKAKGKGQPQARVNINTALVEDIISLEEVDEDMKSVMEALKDN
                     FNKTLNIRTAPGSLDHITVVTADGKLALNQIGQISMKSPQLILVNMASFPECTAAAIK
                     AIRESGMNLNPEVEGTLIRVPIPKVTREHREMLVKLAKQNTNKAKENLRKVRTNAMNK
                     LKKSKDKTSEDTIRLIEKQISQMADDTVAELDRHLAAKTKELLG"
     exon            234..389
                     /gene="Mrrf"
                     /inference="alignment:Splign:2.1.0"
     exon            390..508
                     /gene="Mrrf"
                     /inference="alignment:Splign:2.1.0"
     exon            509..600
                     /gene="Mrrf"
                     /inference="alignment:Splign:2.1.0"
     exon            601..760
                     /gene="Mrrf"
                     /inference="alignment:Splign:2.1.0"
     exon            761..3577
                     /gene="Mrrf"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctataatccc ggctgtagct gtggctgctt ctgaggattc tctcccgtca tggccttggg
       61 aataagatgc tttcgcctac tacatcctgc ctttagcagc tacctggctg atttgagcag
      121 acctgtttca gaagttccca tgaagacagt gcgaggaaga caacgtgacc atatacagta
      181 ctcagcccac ccagcagtgc cagttcgcca gtttgcaacc aagaaggcca aagccaaagg
      241 gaaaggacag ccccaggcca gagtgaacat taacactgcc ttggttgagg acataatcag
      301 tttggaagag gtggatgaag acatgaaatc tgtgatggaa gcacttaaag ataatttcaa
      361 taagactctc aacataagga ctgcaccagg atcccttgat catattactg tggtaactgc
      421 tgatgggaag cttgctctaa accagattgg ccagatctcc atgaagtcgc cacagttgat
      481 tctggtgaat atggccagct tcccagagtg tacagctgca gctatcaagg ctataagaga
      541 aagtggaatg aatctgaacc cagaagtgga aggaacacta attcgggtac ccattcctaa
      601 agtaaccagg gaacacagag aaatgctggt gaaactggcc aaacagaaca ccaacaaagc
      661 caaagaaaat ttacggaagg ttcgcactaa tgcaatgaat aaactgaaga agtcaaagga
      721 caaaacctca gaggacacca ttaggctcat cgagaagcag atcagccaaa tggcagacga
      781 cacggtggcg gagctggacc ggcatctggc agcaaagacc aaagaacttc ttggatgaaa
      841 gtcagcagtc acagccgagc accagtgtct gctcatgcag tgggtggcaa gcgtgtgcgc
      901 ccactgccct gaccatccat catgcagtgg gtggcaagcg tgtgcgccca ctgccctgac
      961 catccatggg aggctgacac tgctgctcct ccgtcagcca ctcagcttcc tgttgggatg
     1021 ctcagacgta tggaatctct tcctcgtttc cttgctctgc tcagaatctc ctggtgtgaa
     1081 ggccctcaga gaatgtctcc tggtgtgaag gccctcagag aatgtctcct ggtgtgaagg
     1141 cagaggacct ttactctggc agtgaccatg actgtggtgt catggcaaga ctagggccac
     1201 cgtcaggctt agcagctcct ctcttcaaca taggagcctc ctttcaaact gtgaatcatc
     1261 ccctgccctt gtgttaaact catttggatt aacgtggacc ttcagtccaa ctgctaatga
     1321 tcaagcctaa ataaattgga aaataacaac cacagaggaa agagagagag gtttggatgg
     1381 aaagccccag tgcttgttta taaagcaacc aagagcaatg cttttgcctc taggttgtcg
     1441 tcccacatgc tgttctatgt ggaccgagct tccgctccta acaaccagcc ctgtttactg
     1501 tggtcagttg ctccctctgg gcagtctctc tgcctccaga ttaggcccca gttttggctg
     1561 ggctactctt atttaaacct ctgtttttct tttctgttag tctatatctg gagaaaaatt
     1621 accagagaga atgacacagt aacacttgaa gttgtccatg tatttatgct gtgagattgt
     1681 tagctgctct ccaaatgttt ttcttctctc cgtcactcca ctcttgtctc tgtcaacatt
     1741 tatttggtaa tgagctacta tttctcctga tagacaggtc ctttgttgtg actgtctttt
     1801 tcttcttctt ttcattgctg tttgccgtgc catcgctttc gtgtagaggt caggtcagac
     1861 agctcccagg agtcagctct caccttgtgg gatggaccca gatcctccct accaagcacc
     1921 tttgtctgct gagtcatctc acttgctgcg ctgtggcttt cagtgccaag ttaagtcagt
     1981 catttttccc ttcccctgca gacattcctt cattcattta attataataa agctatattt
     2041 aggcattatt tgtaatcaca aaacgagaca gatacctgca cttacaaata tggaaactgg
     2101 cacggcagtg ttaggtactg agtcctccag acagtggagt gggaaagtgg tgggacattt
     2161 tattttcctt tctttttctg ataacaaggt cactctacat agccctaact gtcctggagc
     2221 tcactctgta taccaactgt gctggccttg aactcggtac tcctgcctca gcttctcgag
     2281 tgcttagttt aaaggtgtgg gccactgccc agctaggggc atttccattg tacaagatgc
     2341 agtttctcaa gccctgtcat acagccagca agcggctagg cagagagaaa agttgtaggc
     2401 ttgattccag agtctgttct ttccaccgaa cagagtgaga ggcgaatgac catttccacc
     2461 acataccgag cggttctcca gtgcagacca accaggtatc cggtatggag tcaattctga
     2521 gacataacta cctgtggagt ctggggttct gcactccgcc ctgaaaaatg ccctattttt
     2581 ctgacaacaa tcgcaagtct ggaccacaca aacctagttc ccggcccccc cctttgatct
     2641 ggttaatcag cggatgatgc tcagggcttg ggaggtaggt tttctggctt tttataaagc
     2701 atgctctgag gcgtacagat gaacacgatt caggggatta ggggaggtgg gatactggga
     2761 agcaggaata tgctccgagg caccctgggt ggccacattc ccagcactgc cagattgtcc
     2821 aacctgaaga agccactgcc acctgctgtc ctgtcaggac gcagtgggca ccagctgttt
     2881 ctcccgtgcc ctattatgtg ctagaacaca gaggctgctg ggctgtgact gctggctttg
     2941 agcagtgcca ctacactgaa ctgagtggcc ctcacagtgc cccaagcagg aaggtctgtt
     3001 cgaggtctag gtggtgagat gtggctcaag gaacctgcgc tagctactaa agctgctgct
     3061 gctgctgcct ctgcccacac tagtgggacc tgctgggaaa tagccagtgc gaattaggac
     3121 taggccaggg atgaaaggaa ctaacatgcc ctcccacccc atttacttac cctcaaagcc
     3181 agagacaaat gggaagttag gctgccaggg gagagcttct ggagccacaa ggtggaggct
     3241 ttgccagggt tcagttctgc gagtgaccag aattctcgct gcaaatgtgc tgctcaaaga
     3301 tgcaggattt ttttttaata aacagaggaa atgataaatt atgttgtaac tccactccaa
     3361 aggcatttgg ttcttaacag ccaaatcctc tgtagtcttt aaataaacaa aacttatttg
     3421 gtgaacagac gggggtgggg agggatgaaa gattttcagt acttgggttc cacatgtcaa
     3481 caatttctct cctgtgtgta tgttggccaa agccatatat catgataaat gaataaagga
     3541 aagccctgag cccagggcgg tgagacagct cagcaaaaaa aaaaaaaaaa aaaaaaaaaa
     3601 aa
//
