LOCUS       NM_001191605             930 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus alpha-ketoglutarate dehydrogenase subunit 4
            (Kgd4), mRNA.
ACCESSION   NM_001191605 XM_215468
VERSION     NM_001191605.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 930)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   2  (bases 1 to 930)
  AUTHORS   Cavdar Koc,E., Burkhart,W., Blackburn,K., Moseley,A. and
            Spremulli,L.L.
  TITLE     The small subunit of the mammalian mitochondrial ribosome.
            Identification of the full complement of ribosomal proteins present
  JOURNAL   J Biol Chem 276 (22), 19363-19374 (2001)
   PUBMED   11279123
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            FM072467.1, FQ224224.1 and AI070491.1.
            
            On Sep 10, 2014 this sequence version replaced NM_001191605.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FM072467.1, CX570843.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-66                FM072467.1         1-66
            67-657              FQ224224.1         1-591
            658-930             AI070491.1         1-273               c
FEATURES             Location/Qualifiers
     source          1..930
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q12"
     gene            1..930
                     /gene="Kgd4"
                     /gene_synonym="Mrps36"
                     /note="alpha-ketoglutarate dehydrogenase subunit 4"
                     /db_xref="GeneID:294696"
                     /db_xref="RGD:1309315"
     exon            1..119
                     /gene="Kgd4"
                     /gene_synonym="Mrps36"
                     /inference="alignment:Splign:2.1.0"
     CDS             78..389
                     /gene="Kgd4"
                     /gene_synonym="Mrps36"
                     /note="28S ribosomal protein S36, mitochondrial;
                     mitochondrial ribosomal protein S36"
                     /codon_start=1
                     /product="alpha-ketoglutarate dehydrogenase component 4"
                     /protein_id="NP_001178534.1"
                     /db_xref="GeneID:294696"
                     /db_xref="RGD:1309315"
                     /translation="MMGSKMASATRVVQVVKPHAPLIKFPNRRDKPKLSASDTLRSAA
                     LPSHSSVISQHSKGNLSPNLLMHQGPPDTAELIKSLPQKYRRKPMSQEEMEFIQRGGP
                     E"
     exon            120..183
                     /gene="Kgd4"
                     /gene_synonym="Mrps36"
                     /inference="alignment:Splign:2.1.0"
     exon            184..371
                     /gene="Kgd4"
                     /gene_synonym="Mrps36"
                     /inference="alignment:Splign:2.1.0"
     exon            372..920
                     /gene="Kgd4"
                     /gene_synonym="Mrps36"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctccgccc cacgctaccc actctcgata cttctgccgc tcgcctgcgc cccggaagct
       61 gcccctactc gggggtcatg atgggcagca agatggcttc cgccaccagg gtcgtgcagg
      121 tagtgaagcc acatgctccg ttaataaagt tccctaacag aagagacaaa cctaagctca
      181 gtgcttcaga cactttgaga tctgctgcgc taccctccca ctcctctgta atttcccagc
      241 attctaaagg aaatttgtcc ccaaatttac tgatgcatca ggggccacca gacactgcag
      301 aattaataaa atcattacct cagaaataca ggaggaaacc tatgtctcag gaggaaatgg
      361 aatttatcca gcgtgggggt ccagagtgat cgtcgttgtg gctgctgctt gtgaccaggc
      421 agaaggatta gctttacaat aaaggacttc cacaatgtca aatgaaaagt cacatattaa
      481 acaaccttaa taaatgttct gtaagcagaa tgaagtatag aaactccagg cggtcacttg
      541 aatctcctac cttatgtatc ttggtcactt ccccacaagc tggcctatac acttacgaaa
      601 gtctacattt ttaaatgcta gcttgttaac ttactcttga ttatgaagtg ttaccggtga
      661 tgagctatta aaagcacatg gtatctaata aacgtccctt tttctgtttg tgtagatgta
      721 gagataattt atgaaacata atctctgcta taaggaagtc tttttttccc tgaaattaag
      781 tgaggatcag tgagatattt ccactcttaa ctccctgatt ttattttcat ttacaaggtt
      841 atctgggtgt aatgatgtaa ccatactctg ttctaagtaa taataatgca atttaaataa
      901 aacttggcag tgaggattaa aaaaaaaaaa
//
