LOCUS       NM_001412947             690 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein S28 (Mrps28),
            mRNA.
ACCESSION   NM_001412947
VERSION     NM_001412947.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 690)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 690)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000002.1 and FM057072.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BQ205211.1, AI070046.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-25                JAXUCZ010000002.1  94728034-94728058
            26-533              FM057072.1         1-508
            534-690             JAXUCZ010000002.1  94858485-94858641
FEATURES             Location/Qualifiers
     source          1..690
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /map="2q23"
     gene            1..690
                     /gene="Mrps28"
                     /gene_synonym="LRRGT00031; Mrps28l"
                     /note="mitochondrial ribosomal protein S28"
                     /db_xref="GeneID:689025"
                     /db_xref="RGD:1597461"
     exon            1..228
                     /gene="Mrps28"
                     /gene_synonym="LRRGT00031; Mrps28l"
                     /inference="alignment:Splign:2.1.0"
     CDS             19..582
                     /gene="Mrps28"
                     /gene_synonym="LRRGT00031; Mrps28l"
                     /note="28S ribosomal protein S28, mitochondrial"
                     /codon_start=1
                     /product="small ribosomal subunit protein bS1m"
                     /protein_id="NP_001399876.1"
                     /db_xref="GeneID:689025"
                     /db_xref="RGD:1597461"
                     /translation="MAALCGSHAGTVGSRFLRALVFSKPLRNASTESGAENAIHDSSA
                     PRARSGGFASALERHSELQRKAELGLESPKPVESFASMLRHSPLTQMGPAKDKLVIGR
                     IFHIVEDDLYIDFGGKFHCVCKRPDVDGEKYQRGTRVRLRLLDLELTSRFLGGTTDTT
                     ILEADAVLLGLQESRDSKSREERLNKQ"
     exon            229..410
                     /gene="Mrps28"
                     /gene_synonym="LRRGT00031; Mrps28l"
                     /inference="alignment:Splign:2.1.0"
     exon            411..690
                     /gene="Mrps28"
                     /gene_synonym="LRRGT00031; Mrps28l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggtcgtg caggcgtcat ggcggcgctg tgtgggtcac acgccgggac tgttgggagc
       61 cgtttcctga gagcgcttgt cttctccaag cctttgcgaa atgcaagtac ggagagtggc
      121 gccgagaatg cgatccacga ttcctccgct cctcgggcgc gctcaggagg cttcgcgagc
      181 gctctggagc gacactcgga gctgcagcgg aaggcggagc tcgggctgga gtctccaaaa
      241 cctgtggaat cctttgcctc catgctgaga cactctccac tgacacagat ggggcctgcc
      301 aaggacaaac tggtcattgg gcggatcttt cacatcgtgg aggatgatct ctacatagat
      361 tttggtggca agtttcactg tgtatgtaaa agaccagacg tggatggcga gaagtaccag
      421 agaggcacca gggtcaggct gcgtctcctg gatcttgaac tgacgtctag gttcctgggt
      481 gggaccacag atacaacgat cctggaggct gacgcagttc tcctaggact ccaagagagc
      541 agagactcaa aatcaagaga ggaacgactc aacaagcaat gaactctgct tgctgcattc
      601 tcacccgttt tgagcccaga aagctgtcaa gaatataatc agaagactgt gactaagtaa
      661 ctgaataaag ttgtaataaa tgaaaactca
//
