LOCUS       NM_001025408             763 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein S25 (Mrps25),
            mRNA.
ACCESSION   NM_001025408 XM_216222
VERSION     NM_001025408.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 763)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
REFERENCE   2  (bases 1 to 763)
  AUTHORS   Wen,T., Gu,P. and Chen,F.
  TITLE     Discovery of two novel functional genes from differentiation of
            neural stem cells in the striatum of the fetal rat
  JOURNAL   Neurosci Lett 329 (1), 101-105 (2002)
   PUBMED   12161272
  REMARK    GeneRIF: Sequencing analyses showed that SHD10 shared a 94%
            (547/581) homology with mouse EST BI687817, but its biological
            function has not been reported. SHD11 shared a 91% (512/562)
            homology with mouse EST BG172336.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097381.1.
            
            On Jul 15, 2005 this sequence version replaced XM_216222.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097381.1, FQ210488.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132293, SAMD00132306
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on single
                                                  protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..763
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q34"
     gene            1..763
                     /gene="Mrps25"
                     /gene_synonym="Shd10"
                     /note="mitochondrial ribosomal protein S25"
                     /db_xref="GeneID:297459"
                     /db_xref="RGD:1308770"
     exon            1..172
                     /gene="Mrps25"
                     /gene_synonym="Shd10"
                     /inference="alignment:Splign:2.1.0"
     CDS             39..554
                     /gene="Mrps25"
                     /gene_synonym="Shd10"
                     /EC_number="3.6.5.3"
                     /note="28S ribosomal protein S25, mitochondrial; S25mt;
                     MRP-S25"
                     /codon_start=1
                     /product="small ribosomal subunit protein mS25"
                     /protein_id="NP_001020579.1"
                     /db_xref="GeneID:297459"
                     /db_xref="RGD:1308770"
                     /translation="MPMKGRFPIRRTLQYLGSGDVVFKESVKVMTVNYNTHGELGEGA
                     RKFVFFNIPQIQYKNPWVQIMLFKNMTPSPFLRFYLESGEQVLVDVETKSNTEIVEHI
                     KKILGKKEETLREEELEKQQRFHPGNFGPRKYCLRECMCEVEGQVPCPGLVPLPKEMT
                     GKYKAALKANT"
     exon            173..279
                     /gene="Mrps25"
                     /gene_synonym="Shd10"
                     /inference="alignment:Splign:2.1.0"
     exon            280..367
                     /gene="Mrps25"
                     /gene_synonym="Shd10"
                     /inference="alignment:Splign:2.1.0"
     exon            368..738
                     /gene="Mrps25"
                     /gene_synonym="Shd10"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcgctggtc cgcggctaga gaagttcctg tcttcaccat gccgatgaaa ggccgtttcc
       61 ctatccgccg tacactgcag tatctgggta gcggagacgt ggtattcaag gagtcggtga
      121 aggtcatgac cgtgaactac aacacgcatg gggaactggg cgaaggtgcc aggaaattcg
      181 tgtttttcaa catccctcag atccagtata agaatccttg ggtgcagatc atgctgttta
      241 agaacatgac gccatcgccc ttcctgcggt tctacctaga atctggggag caggtccttg
      301 tagacgtgga gacgaagagt aatacggaga tcgtggagca cataaagaaa atcttgggca
      361 agaaagagga gaccctcagg gaggaggagc tggagaagca gcagcgcttt catccaggca
      421 actttggccc ccggaagtac tgcctgcggg agtgcatgtg cgaagtggaa ggtcaggtgc
      481 cctgccctgg cctggtgccc ttacccaagg agatgacagg gaagtacaaa gctgctttga
      541 aagccaatac ttaggtctaa gcaaggttat ctgggatgga ctggtggcat ctgactggag
      601 acgaattaca ctggtaccat gaatgatgga actccctgca atggaaagac cagcttgctc
      661 atctatttaa aggacatggg atgaaggctg ggattgccag ctgctgaaca aatatcaata
      721 aaagacttag tcttcctaaa aaaaaaaaaa aaaaaaaaaa aaa
//
