LOCUS       NM_001108289            1294 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus mitochondrial ribosomal protein S23 (Mrps23),
            mRNA.
ACCESSION   NM_001108289 XM_001081199 XM_340874
VERSION     NM_001108289.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1294)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1294)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_340874.3, XM_001081199.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ213501.1, FQ216939.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1294
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q26"
     gene            1..1294
                     /gene="Mrps23"
                     /note="mitochondrial ribosomal protein S23"
                     /db_xref="GeneID:360594"
                     /db_xref="RGD:1306963"
     exon            1..70
                     /gene="Mrps23"
                     /inference="alignment:Splign:2.1.0"
     CDS             27..560
                     /gene="Mrps23"
                     /note="28S ribosomal protein S23, mitochondrial"
                     /codon_start=1
                     /product="small ribosomal subunit protein mS23"
                     /protein_id="NP_001101759.1"
                     /db_xref="GeneID:360594"
                     /db_xref="RGD:1306963"
                     /translation="MAGSRLETVGSVFSRTRDLMRAGVLKEKPLWYDIYKAFPPLKEP
                     VFRRPRLRYGKAKADIQDIFYREDQIRAKFFSTYGSGHKAIDLFNPNFKSTCQRFVEK
                     YTELQSLGETDEEKLFVETGKALLAEGVILRRVREAKTVNVRLQSSSEGNDPLEEDGQ
                     KQRVQVKQEPETASSPP"
     exon            71..241
                     /gene="Mrps23"
                     /inference="alignment:Splign:2.1.0"
     exon            242..319
                     /gene="Mrps23"
                     /inference="alignment:Splign:2.1.0"
     exon            320..446
                     /gene="Mrps23"
                     /inference="alignment:Splign:2.1.0"
     exon            447..1294
                     /gene="Mrps23"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ccagcgactt tctactctaa gtgcccatgg cggggagccg gctggagacg gtggggagcg
       61 tgttctcccg gaccagggat ctgatgcggg ctggggtgtt gaaggagaag ccactgtggt
      121 atgacatata caaggccttt ccacctctga aagaacctgt cttccgaagg cctcgtttgc
      181 gatatggcaa agccaaagct gacatccagg acatctttta ccgagaggat cagattcgag
      241 cgaaattctt ttcaacctat ggatctggtc acaaagctat tgatctgttc aacccaaact
      301 tcaagtctac ctgtcagcgg tttgtggaga agtacacaga gctgcagagt cttggagaaa
      361 cagatgaaga gaagttattt gtagaaacgg ggaaggctct gttggcagaa ggcgtcattt
      421 taagacgagt aagagaagca aagactgtca atgtgagact ccaaagttca tcagaaggaa
      481 atgaccctct ggaagaagat ggccagaagc agcgtgtgca ggtgaaacag gagccagaga
      541 cagcctcctc gcccccctga ggcccctcag tgtactgagc gtgcccacca ccactggcct
      601 aagacgtttg gactctgacg gcctctgtct gtcaggcctg tgtgccttct cttagttcct
      661 gtccctgggt tgttctaagt ctcagtactg tggcttaaaa gtgccagtgt tgtgaacttt
      721 tatttcaaga catggttaaa taaagggttc tccaatgctt ccaaagtaaa tttactctga
      781 aactgtaaat aacaccagga aacctttaaa ggtgcctcgt gctggctgtg ggccgcccac
      841 aactgaactc gctgtgcttc ttgtgtgaat ccctcagaat tctacttggc cacatggtgt
      901 ggttcctcgg ccaagtatct gcaggtgatg tttgtacttt ttgctgtaga cctgttggct
      961 gcagcttgac aggcctagca gaggcacagc cagcagccac tgcagtcaga ccgaaggcct
     1021 gtgtgatgtg gacaaagacc aaatccaaga cttgaatgtc acgggttggg ctaagaatgt
     1081 tggagatgat tagcatgagc tcacagctca tggactgcct agaaaatgtt tggcaaatga
     1141 ataatgatca cacctagcta cctaaggact gtttttcgta gtcactgagt ttctggcagg
     1201 ggtaggggca actgattcag agggtcttcc ccacaaacac ccttccttcc tggtgctgct
     1261 tcatcatgtg gtgtaaatga gatatcccgt tgtg
//
