LOCUS       XM_039105366            2157 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus mitochondrial ribosomal protein S2
            (Mrps2), transcript variant X3, mRNA.
ACCESSION   XM_039105366
VERSION     XM_039105366.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039105366.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2157
                     /gene="Mrps2"
                     /note="mitochondrial ribosomal protein S2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 32 ESTs, 1 long SRA read, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     86 samples with support for all annotated introns"
                     /db_xref="GeneID:362094"
                     /db_xref="RGD:1309116"
     CDS             251..886
                     /gene="Mrps2"
                     /codon_start=1
                     /product="28S ribosomal protein S2, mitochondrial isoform
                     X3"
                     /protein_id="XP_038961294.1"
                     /db_xref="GeneID:362094"
                     /db_xref="RGD:1309116"
                     /translation="MFICSWFSNLHREKARPFMEPYIFGNRLGQDIIDLDQTALNLQL
                     ALNFTAHVAYRKGIILFVSRNRQFSHLIETTAQACGEYAHTRYFKGGLLTNAQLLFGP
                     TVRLPDLIVFLHTLNNVFESHVAVRDAAKMNIPTVGIVDTNCNPCLITYPIPGNDDSP
                     QAIQLFCKLFRTTINRAKEKRRQMEALHRLQSPKGSEGTGTASAPDQSHSP"
ORIGIN      
        1 ttcagatttc cagagcagga tactagatgt gccgttacaa cattcagatt tcttcaatgt
       61 caaggagctg ttttctgtga agagcctctt cgaggcccga gtacacctgg gacataaagc
      121 cggttgccgc catagacatg gtgaaaattg agggtcattg ctgactgggg acccctcctg
      181 agaggtcctg ctgtatagaa cagaagtggc catagagtgc tccagtaaac agaacacctt
      241 ggttgggttc atgtttatct gcagttggtt ctcaaatctc cacagggaga aggcgagacc
      301 gtttatggag ccatacatct ttgggaaccg cctgggccaa gatatcattg atctggatca
      361 gacagccttg aatctccaac tggctttgaa cttcaccgcc catgtggcct accgcaaggg
      421 catcatcctg tttgtgagcc ggaatcgtca attctctcac ttaattgaga ctacagccca
      481 agcctgcggg gagtatgccc acacccgcta cttcaagggt ggcttgctga ctaacgcaca
      541 actcctcttt gggcctacag tccgcctgcc ggacctcatc gtcttcctgc acacactcaa
      601 caatgtcttt gaatcccatg tagccgtgag ggatgcggcc aagatgaaca tccccacagt
      661 gggcattgtg gacaccaact gcaacccatg cctcatcact taccctatcc ctggcaatga
      721 tgactcaccc caagctatcc agctcttctg caagctcttc cggacaacca tcaacagggc
      781 caaggagaag aggaggcaga tggaggccct ccatcggcta cagagtccca aggggtccga
      841 gggcactggg acagcctctg cacctgatca aagtcattcc ccatgacaga aagcccttct
      901 cccaccctag atagccaggc ctcttctgag caggaaggtc cttgtccaac cctggtctat
      961 gtccccattc tccatcctca gcatcagcac cacagtccta tattccctag atatggccac
     1021 cccaaagttc aatcatcttg agctaaccct ggtctgtctc ttttctggga acaaactcag
     1081 gtaaagtgca tatccacatg gcctcttgca tctattaaga tttgaacata gctagcaaag
     1141 tggatctctc cctccctctc ccccttcccc tctctcgctc ccccgccccc atctccctct
     1201 ctctcactct cctaggtctt acttccactt cagaagtaga tctgtctcac gtgggttcca
     1261 tttggcttct cttttcagtt agaaattaat ctttcattat ctgctaatta atccttcatt
     1321 ctctgaagaa aattccatgc cagacaatat tgatgtccct caggaacccc agtagttgcc
     1381 tctagacctg caaccagaca tagggctaag taagcaggct cccagagggg aggtggaaat
     1441 acagcccatg cgttgtgaca cacctaaaga acttaggagt ttgctaaccc gttcaggcag
     1501 aagtctgggg aatatgtgta ggaatagatt ttaaaggtgg ggtaatggtt ggaggaacat
     1561 aaaattgaaa tcaggacgag tttattgata tgggctctct gagtagagat ctatgtttaa
     1621 aacggaaact ctgatagtga aaaatgtttg gctgaagtat ttcttaaaag agcctactgc
     1681 tggaggcacc aaagtccttg agcccacaga tcaccaagaa aaccaggcgt gttagtcaca
     1741 tagggttgtc tcctcaaaga agggaaatca atgcctgttt tgcacccaga ggactgggag
     1801 tgactgttgt taatgacctg gtgacctttg ctatctgtgg agccagacct tacccaaatc
     1861 cccctaaatg cttatctcgg acttttcctt tcctagacct ttacttttag cttggtttct
     1921 ccaccaatag aacccatccg taggggagat atcaagagac cacaccaatc ctaggccctt
     1981 aagctataag acccatcttt gtggtcatgt gtactttgag ctgagttttg atgtaattat
     2041 gcctcttcta cctggggttg tattacacca ggaagctttt ttccaaaatt gtacggtttt
     2101 aatatgttta taataaacta catggtgtca gactctagaa ctttgaacca gcacaaa
//
